RNA–Protein interactions for RNA: ENST00000316084.9

RPS4X-201, Transcript of ribosomal protein S4 X-linked, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS4X, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4X-201ENST00000316084 AFAP1Q8N556 730 aa13.32□□□□□ -0.28
RPS4X-201ENST00000316084 DEPDC5O75140 1603 aa13.32□□□□□ -0.28
RPS4X-201ENST00000316084 CTTNBP2Q8WZ74 1663 aa13.31□□□□□ -0.28
RPS4X-201ENST00000316084 C1QTNF8P60827 252 aa13.3□□□□□ -0.28
RPS4X-201ENST00000316084 RBM6P78332 1123 aaKnown RBP13.3□□□□□ -0.28
RPS4X-201ENST00000316084 COL16A1Q07092 1604 aaPredicted RBP13.3□□□□□ -0.28
RPS4X-201ENST00000316084 PLCH2O75038 1416 aa13.29□□□□□ -0.28
RPS4X-201ENST00000316084 AFF2P51816 1311 aa13.28□□□□□ -0.28
RPS4X-201ENST00000316084 ITSN2Q9NZM3 1697 aa13.28□□□□□ -0.28
RPS4X-201ENST00000316084 EP400Q96L91 3159 aa13.28□□□□□ -0.28
RPS4X-201ENST00000316084 CCDC125Q86Z20 511 aa13.28□□□□□ -0.28
RPS4X-201ENST00000316084 FAM9AQ8IZU1 332 aaPredicted RBP13.28□□□□□ -0.28
RPS4X-201ENST00000316084 ABCC1P33527 1531 aa13.27□□□□□ -0.28
RPS4X-201ENST00000316084 PLEKHD1A6NEE1 506 aa13.27□□□□□ -0.29
RPS4X-201ENST00000316084 PPARGC1BQ86YN6 1023 aaKnown RBP13.27□□□□□ -0.29
RPS4X-201ENST00000316084 MLH3Q9UHC1 1453 aa13.25□□□□□ -0.29
RPS4X-201ENST00000316084 SHPRHQ149N8 1683 aa13.24□□□□□ -0.29
RPS4X-201ENST00000316084 QTRT2Q9H974 415 aaKnown RBP13.24□□□□□ -0.29
RPS4X-201ENST00000316084 FGD6Q6ZV73 1430 aa13.24□□□□□ -0.29
RPS4X-201ENST00000316084 PCDH10Q9P2E7 1040 aa13.23□□□□□ -0.29
RPS4X-201ENST00000316084 LRRC9Q6ZRR7 1453 aa13.23□□□□□ -0.29
RPS4X-201ENST00000316084 CEP350Q5VT06 3117 aa13.23□□□□□ -0.29
RPS4X-201ENST00000316084 ZNF784Q8NCA9 323 aaPredicted RBP13.23□□□□□ -0.29
RPS4X-201ENST00000316084 NUP153P49790 1475 aaKnown RBP13.23□□□□□ -0.29
RPS4X-201ENST00000316084 NWD1Q149M9 1564 aa13.23□□□□□ -0.29
RPS4X-201ENST00000316084 ZC3H13Q5T200 1668 aaKnown RBP13.22□□□□□ -0.29
RPS4X-201ENST00000316084 EFCAB2Q5VUJ9 269 aa13.22□□□□□ -0.29
RPS4X-201ENST00000316084 KDM5DQ9BY66 1539 aa13.22□□□□□ -0.29
RPS4X-201ENST00000316084 PSDA5PKW4 1024 aaPredicted RBP13.21□□□□□ -0.29
RPS4X-201ENST00000316084 P3H3Q8IVL6 736 aa13.2□□□□□ -0.3
RPS4X-201ENST00000316084 BCL9LQ86UU0 1499 aa13.2□□□□□ -0.3
RPS4X-201ENST00000316084 THEMISQ8N1K5 641 aaPredicted RBP13.18□□□□□ -0.3
RPS4X-201ENST00000316084 MYO5CQ9NQX4 1742 aa13.18□□□□□ -0.3
RPS4X-201ENST00000316084 NGLY1Q96IV0 654 aa13.18□□□□□ -0.3
RPS4X-201ENST00000316084 KIDINS220Q9ULH0 1771 aa13.18□□□□□ -0.3
RPS4X-201ENST00000316084 DEFB132Q7Z7B7 95 aa13.16□□□□□ -0.3
RPS4X-201ENST00000316084 TMEM94Q12767 1356 aa13.15□□□□□ -0.3
RPS4X-201ENST00000316084 TNRQ92752 1358 aa13.15□□□□□ -0.3
RPS4X-201ENST00000316084 MAP3K1Q13233 1512 aa13.14□□□□□ -0.31
RPS4X-201ENST00000316084 UGGT1Q9NYU2 1555 aa13.14□□□□□ -0.31
RPS4X-201ENST00000316084 FAM135AQ9P2D6 1515 aa13.13□□□□□ -0.31
RPS4X-201ENST00000316084 ATP7AQ04656 1500 aa13.13□□□□□ -0.31
RPS4X-201ENST00000316084 KIF14Q15058 1648 aa13.12□□□□□ -0.31
RPS4X-201ENST00000316084 BLMP54132 1417 aaPredicted RBP13.11□□□□□ -0.31
RPS4X-201ENST00000316084 SLAIN2Q9P270 581 aa13.11□□□□□ -0.31
RPS4X-201ENST00000316084 FBXO31Q5XUX0 539 aaPredicted RBP13.09□□□□□ -0.31
RPS4X-201ENST00000316084 C8orf37Q96NL8 207 aa13.09□□□□□ -0.31
RPS4X-201ENST00000316084 ADGBQ8N7X0 1667 aa13.08□□□□□ -0.32
RPS4X-201ENST00000316084 CAPN15O75808 1086 aa13.08□□□□□ -0.32
RPS4X-201ENST00000316084 ARHGAP5Q13017 1502 aa13.07□□□□□ -0.32
RPS4X-201ENST00000316084 DIP2AQ14689 1571 aa13.07□□□□□ -0.32
RPS4X-201ENST00000316084 DCAF8L1A6NGE4 600 aa13.07□□□□□ -0.32
RPS4X-201ENST00000316084 GGT6Q6P531 493 aa13.07□□□□□ -0.32
RPS4X-201ENST00000316084 AHDC1Q5TGY3 1603 aaPredicted RBP13.07□□□□□ -0.32
RPS4X-201ENST00000316084 NLRP1Q9C000 1473 aa13.05□□□□□ -0.32
RPS4X-201ENST00000316084 EHMT2Q96KQ7 1210 aa13.05□□□□□ -0.32
RPS4X-201ENST00000316084 TIAM1Q13009 1591 aa13.04□□□□□ -0.32
RPS4X-201ENST00000316084 SCAF11Q99590 1463 aaKnown RBP13.04□□□□□ -0.32
RPS4X-201ENST00000316084 PLXNC1O60486 1568 aa13.02□□□□□ -0.32
RPS4X-201ENST00000316084 CAMTA1Q9Y6Y1 1673 aa13.02□□□□□ -0.33
RPS4X-201ENST00000316084 PROSER2Q86WR7 435 aaPredicted RBP13.02□□□□□ -0.33
RPS4X-201ENST00000316084 MSH6P52701 1360 aa13.02□□□□□ -0.33
RPS4X-201ENST00000316084 SAMD9Q5K651 1589 aa13.01□□□□□ -0.33
RPS4X-201ENST00000316084 SF3B2Q13435 895 aaKnown RBP13□□□□□ -0.33
RPS4X-201ENST00000316084 PZPP20742 1482 aa12.99□□□□□ -0.33
RPS4X-201ENST00000316084 RTEL1-TNFRSF6BF6WH68 1400 aa12.99□□□□□ -0.33
RPS4X-201ENST00000316084 MIA2Q96PC5 1412 aa12.99□□□□□ -0.33
RPS4X-201ENST00000316084 R3HDM1Q15032 1099 aaKnown RBP12.98□□□□□ -0.33
RPS4X-201ENST00000316084 PRDM15P57071 1507 aaPredicted RBP12.98□□□□□ -0.33
RPS4X-201ENST00000316084 TRPC5Q9UL62 973 aaPredicted RBP12.98□□□□□ -0.33
RPS4X-201ENST00000316084 ABCC3O15438 1527 aa12.97□□□□□ -0.33
RPS4X-201ENST00000316084 KDM5AP29375 1690 aaKnown RBP12.97□□□□□ -0.33
RPS4X-201ENST00000316084 CDC42BPBQ9Y5S2 1711 aa12.96□□□□□ -0.33
RPS4X-201ENST00000316084 A2MP01023 1474 aa12.95□□□□□ -0.34
RPS4X-201ENST00000316084 KCNA6P17658 529 aa12.95□□□□□ -0.34
RPS4X-201ENST00000316084 USP21Q9UK80 565 aa12.95□□□□□ -0.34
RPS4X-201ENST00000316084 ATRNO75882 1429 aa12.95□□□□□ -0.34
RPS4X-201ENST00000316084 EEA1Q15075 1411 aa12.95□□□□□ -0.34
RPS4X-201ENST00000316084 SAMD9LQ8IVG5 1584 aa12.95□□□□□ -0.34
RPS4X-201ENST00000316084 GIGYF1O75420 1035 aaPredicted RBP12.94□□□□□ -0.34
RPS4X-201ENST00000316084 PRELPP51888 382 aa12.94□□□□□ -0.34
RPS4X-201ENST00000316084 PELP1Q8IZL8 1130 aaKnown RBP12.94□□□□□ -0.34
RPS4X-201ENST00000316084 UNC13BO14795 1591 aa12.93□□□□□ -0.34
RPS4X-201ENST00000316084 LTKP29376 864 aa12.93□□□□□ -0.34
RPS4X-201ENST00000316084 CHD4Q14839 1912 aa12.92□□□□□ -0.34
RPS4X-201ENST00000316084 ADAMTS2O95450 1211 aa12.9□□□□□ -0.34
RPS4X-201ENST00000316084 NINLQ9Y2I6 1382 aa12.9□□□□□ -0.34
RPS4X-201ENST00000316084 NKTRP30414 1462 aaKnown RBP12.9□□□□□ -0.34
RPS4X-201ENST00000316084 NCOA2Q15596 1464 aa12.89□□□□□ -0.35
RPS4X-201ENST00000316084 TXNDC2Q86VQ3 553 aa12.89□□□□□ -0.35
RPS4X-201ENST00000316084 BRWD3Q6RI45 1802 aa12.89□□□□□ -0.35
RPS4X-201ENST00000316084 UBR1Q8IWV7 1749 aa12.89□□□□□ -0.35
RPS4X-201ENST00000316084 SETD5Q9C0A6 1442 aa12.89□□□□□ -0.35
RPS4X-201ENST00000316084 MAST1Q9Y2H9 1570 aa12.88□□□□□ -0.35
RPS4X-201ENST00000316084 UTRNP46939 3433 aa12.87□□□□□ -0.35
RPS4X-201ENST00000316084 SPAG9O60271 1321 aaKnown RBP12.87□□□□□ -0.35
RPS4X-201ENST00000316084 BAG6P46379 1132 aa12.87□□□□□ -0.35
RPS4X-201ENST00000316084 ARHGAP23Q9P227 1491 aa12.86□□□□□ -0.35
RPS4X-201ENST00000316084 PPP1R1BQ9UD71 204 aaPredicted RBP12.86□□□□□ -0.35
RPS4X-201ENST00000316084 FNBP4Q8N3X1 1017 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms