RNA–Protein interactions for RNA: ENST00000315713.5

ABCD3-201, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCD3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-201ENST00000315713 RTEL1-TNFRSF6BF6WH68 1400 aa19.12■□□□□ 0.65
ABCD3-201ENST00000315713 FAM135AQ9P2D6 1515 aa19.11■□□□□ 0.65
ABCD3-201ENST00000315713 NCOA2Q15596 1464 aa19.11■□□□□ 0.65
ABCD3-201ENST00000315713 PKD2Q13563 968 aa19.09■□□□□ 0.65
ABCD3-201ENST00000315713 ARHGEF5Q12774 1597 aa19.09■□□□□ 0.65
ABCD3-201ENST00000315713 PZPP20742 1482 aa19.09■□□□□ 0.65
ABCD3-201ENST00000315713 DHX29Q7Z478 1369 aaKnown RBP19.08■□□□□ 0.65
ABCD3-201ENST00000315713 RNF17Q9BXT8 1623 aaKnown RBP19.07■□□□□ 0.64
ABCD3-201ENST00000315713 CFAP65Q6ZU64 1925 aaKnown RBP19.07■□□□□ 0.64
ABCD3-201ENST00000315713 PPP6R1Q9UPN7 881 aa19.06■□□□□ 0.64
ABCD3-201ENST00000315713 CEP152O94986 1710 aa19.05■□□□□ 0.64
ABCD3-201ENST00000315713 ZC3H13Q5T200 1668 aaKnown RBP19.05■□□□□ 0.64
ABCD3-201ENST00000315713 TNRQ92752 1358 aa19.05■□□□□ 0.64
ABCD3-201ENST00000315713 UBAP1LF5GYI3 381 aa19.03■□□□□ 0.64
ABCD3-201ENST00000315713 SOCS7O14512 581 aa19.03■□□□□ 0.64
ABCD3-201ENST00000315713 IQGAP1P46940 1657 aa19.02■□□□□ 0.64
ABCD3-201ENST00000315713 KIF3BO15066 747 aa19.02■□□□□ 0.64
ABCD3-201ENST00000315713 DEPDC5O75140 1603 aa19.02■□□□□ 0.64
ABCD3-201ENST00000315713 MAST1Q9Y2H9 1570 aa19.02■□□□□ 0.63
ABCD3-201ENST00000315713 EIF2AK4Q9P2K8 1649 aaKnown RBP19.01■□□□□ 0.63
ABCD3-201ENST00000315713 APLP2Q06481 763 aa19.01■□□□□ 0.63
ABCD3-201ENST00000315713 VWDEQ8N2E2 1590 aa19.01■□□□□ 0.63
ABCD3-201ENST00000315713 STRCP1A6NGW2 1772 aa19.01■□□□□ 0.63
ABCD3-201ENST00000315713 CPS1P31327 1500 aa19■□□□□ 0.63
ABCD3-201ENST00000315713 FBXO31Q5XUX0 539 aaPredicted RBP19■□□□□ 0.63
ABCD3-201ENST00000315713 MROH1Q8NDA8 1641 aa19■□□□□ 0.63
ABCD3-201ENST00000315713 MAP3K1Q13233 1512 aa19■□□□□ 0.63
ABCD3-201ENST00000315713 UGGT1Q9NYU2 1555 aa18.99■□□□□ 0.63
ABCD3-201ENST00000315713 NLRP1Q9C000 1473 aa18.98■□□□□ 0.63
ABCD3-201ENST00000315713 ABCC3O15438 1527 aa18.98■□□□□ 0.63
ABCD3-201ENST00000315713 CROCC2H7BZ55 1655 aa18.98■□□□□ 0.63
ABCD3-201ENST00000315713 LRRC9Q6ZRR7 1453 aa18.97■□□□□ 0.63
ABCD3-201ENST00000315713 SHANK2Q9UPX8 1470 aa18.97■□□□□ 0.63
ABCD3-201ENST00000315713 MED1Q15648 1581 aaPredicted RBP18.96■□□□□ 0.63
ABCD3-201ENST00000315713 UBR1Q8IWV7 1749 aa18.95■□□□□ 0.62
ABCD3-201ENST00000315713 ALKQ9UM73 1620 aa18.95■□□□□ 0.62
ABCD3-201ENST00000315713 WASHC2CQ9Y4E1 1318 aa18.95■□□□□ 0.62
ABCD3-201ENST00000315713 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.94■□□□□ 0.62
ABCD3-201ENST00000315713 MIA2Q96PC5 1412 aa18.93■□□□□ 0.62
ABCD3-201ENST00000315713 MED14O60244 1454 aa18.92■□□□□ 0.62
ABCD3-201ENST00000315713 SYNMO15061 1565 aa18.92■□□□□ 0.62
ABCD3-201ENST00000315713 NPHP4O75161 1426 aaPredicted RBP18.91■□□□□ 0.62
ABCD3-201ENST00000315713 ERVK-7P63135 1459 aa18.91■□□□□ 0.62
ABCD3-201ENST00000315713 KANK4Q5T7N3 995 aaPredicted RBP18.91■□□□□ 0.62
ABCD3-201ENST00000315713 SCAF1Q9H7N4 1312 aaKnown RBP18.91■□□□□ 0.62
ABCD3-201ENST00000315713 RSPH4AQ5TD94 716 aa18.9■□□□□ 0.62
ABCD3-201ENST00000315713 XIRP1Q702N8 1843 aaKnown RBP18.88■□□□□ 0.61
ABCD3-201ENST00000315713 HSPA1LP34931 641 aa18.87■□□□□ 0.61
ABCD3-201ENST00000315713 PRDM15P57071 1507 aaPredicted RBP18.87■□□□□ 0.61
ABCD3-201ENST00000315713 PIP4K2BP78356 416 aa18.87■□□□□ 0.61
ABCD3-201ENST00000315713 ANKLE2Q86XL3 938 aa18.87■□□□□ 0.61
ABCD3-201ENST00000315713 MYOM3Q5VTT5 1437 aa18.86■□□□□ 0.61
ABCD3-201ENST00000315713 TSPY4P0CV99 314 aa18.86■□□□□ 0.61
ABCD3-201ENST00000315713 TSPY10P0CW01 314 aa18.86■□□□□ 0.61
ABCD3-201ENST00000315713 DUOX2Q9NRD8 1548 aa18.85■□□□□ 0.61
ABCD3-201ENST00000315713 THEMISQ8N1K5 641 aaPredicted RBP18.85■□□□□ 0.61
ABCD3-201ENST00000315713 PTPN23Q9H3S7 1636 aa18.84■□□□□ 0.61
ABCD3-201ENST00000315713 PIK3C2BO00750 1634 aa18.82■□□□□ 0.6
ABCD3-201ENST00000315713 TOM1O60784 492 aa18.82■□□□□ 0.6
ABCD3-201ENST00000315713 LRRC7Q96NW7 1537 aa18.81■□□□□ 0.6
ABCD3-201ENST00000315713 SCAF11Q99590 1463 aaKnown RBP18.8■□□□□ 0.6
ABCD3-201ENST00000315713 SLIT1O75093 1534 aa18.78■□□□□ 0.6
ABCD3-201ENST00000315713 KIF15Q9NS87 1388 aa18.77■□□□□ 0.6
ABCD3-201ENST00000315713 ARHGAP23Q9P227 1491 aa18.77■□□□□ 0.59
ABCD3-201ENST00000315713 ERBINQ96RT1 1412 aa18.76■□□□□ 0.59
ABCD3-201ENST00000315713 KDM5AP29375 1690 aaKnown RBP18.76■□□□□ 0.59
ABCD3-201ENST00000315713 MYO5BQ9ULV0 1848 aa18.74■□□□□ 0.59
ABCD3-201ENST00000315713 ABCC5O15440 1437 aa18.74■□□□□ 0.59
ABCD3-201ENST00000315713 ARHGAP31Q2M1Z3 1444 aa18.74■□□□□ 0.59
ABCD3-201ENST00000315713 SENP3Q9H4L4 574 aaPredicted RBP18.72■□□□□ 0.59
ABCD3-201ENST00000315713 DAPK1P53355 1430 aa18.72■□□□□ 0.59
ABCD3-201ENST00000315713 EFCAB6Q5THR3 1501 aa18.69■□□□□ 0.58
ABCD3-201ENST00000315713 FGD6Q6ZV73 1430 aa18.68■□□□□ 0.58
ABCD3-201ENST00000315713 LTKP29376 864 aa18.68■□□□□ 0.58
ABCD3-201ENST00000315713 PPARGC1BQ86YN6 1023 aaKnown RBP18.68■□□□□ 0.58
ABCD3-201ENST00000315713 RRP7BPQ9NSQ0 103 aa18.67■□□□□ 0.58
ABCD3-201ENST00000315713 ADGRB3O60242 1522 aa18.67■□□□□ 0.58
ABCD3-201ENST00000315713 LMTK2Q8IWU2 1503 aa18.67■□□□□ 0.58
ABCD3-201ENST00000315713 PHF23Q9BUL5 403 aaPredicted RBP18.66■□□□□ 0.58
ABCD3-201ENST00000315713 GCC2Q8IWJ2 1684 aa18.66■□□□□ 0.58
ABCD3-201ENST00000315713 ROBO1Q9Y6N7 1651 aa18.64■□□□□ 0.57
ABCD3-201ENST00000315713 TXNDC2Q86VQ3 553 aa18.64■□□□□ 0.57
ABCD3-201ENST00000315713 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.64■□□□□ 0.571e-7■□□□□ 8.4
ABCD3-201ENST00000315713 TMEM2Q9UHN6 1383 aa18.64■□□□□ 0.57
ABCD3-201ENST00000315713 KANK1Q14678 1352 aa18.63■□□□□ 0.57
ABCD3-201ENST00000315713 NWD1Q149M9 1564 aa18.63■□□□□ 0.57
ABCD3-201ENST00000315713 TET3O43151 1660 aa18.61■□□□□ 0.57
ABCD3-201ENST00000315713 ANKRD30AQ9BXX3 1397 aa18.59■□□□□ 0.57
ABCD3-201ENST00000315713 FAM50AQ14320 339 aaKnown RBP18.59■□□□□ 0.57
ABCD3-201ENST00000315713 EID1Q9Y6B2 187 aa18.59■□□□□ 0.57
ABCD3-201ENST00000315713 ADGRL2O95490 1459 aa18.58■□□□□ 0.57
ABCD3-201ENST00000315713 NOS1P29475 1434 aa18.58■□□□□ 0.57
ABCD3-201ENST00000315713 CHD2O14647 1828 aaKnown RBP18.58■□□□□ 0.57
ABCD3-201ENST00000315713 STAG3Q9UJ98 1225 aa18.57■□□□□ 0.56
ABCD3-201ENST00000315713 CHIC2Q9UKJ5 165 aa18.57■□□□□ 0.56
ABCD3-201ENST00000315713 NKTRP30414 1462 aaKnown RBP18.56■□□□□ 0.56
ABCD3-201ENST00000315713 TMEM94Q12767 1356 aa18.55■□□□□ 0.56
ABCD3-201ENST00000315713 PHLPP1O60346 1717 aa18.55■□□□□ 0.56
ABCD3-201ENST00000315713 TMEM131LA2VDJ0 1609 aa18.54■□□□□ 0.56
ABCD3-201ENST00000315713 IDI1Q13907 227 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms