RNA–Protein interactions for RNA: ENST00000315266.9

GPHN-201, Transcript of gephyrin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GPHN, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-201ENST00000315266 CC2D1BQ5T0F9 858 aaKnown RBP13.41□□□□□ -0.26
GPHN-201ENST00000315266 HSPA5P11021 654 aaKnown RBP13.41□□□□□ -0.26
GPHN-201ENST00000315266 PPM1GO15355 546 aaPredicted RBP13.4□□□□□ -0.26
GPHN-201ENST00000315266 TTC37Q6PGP7 1564 aa13.4□□□□□ -0.26
GPHN-201ENST00000315266 NEUROD2Q15784 382 aa13.39□□□□□ -0.27
GPHN-201ENST00000315266 CDC42BPAQ5VT25 1732 aa13.39□□□□□ -0.27
GPHN-201ENST00000315266 SHANK2Q9UPX8 1470 aa13.39□□□□□ -0.27
GPHN-201ENST00000315266 ZBTB7CA1YPR0 619 aa13.39□□□□□ -0.27
GPHN-201ENST00000315266 STK26Q9P289 416 aa13.39□□□□□ -0.27
GPHN-201ENST00000315266 PREX2Q70Z35 1606 aa13.39□□□□□ -0.27
GPHN-201ENST00000315266 CANXP27824 592 aaKnown RBP13.38□□□□□ -0.27
GPHN-201ENST00000315266 SOX12O15370 315 aa13.36□□□□□ -0.27
GPHN-201ENST00000315266 RBM19Q9Y4C8 960 aaKnown RBP13.36□□□□□ -0.27
GPHN-201ENST00000315266 RAPGEF3O95398 923 aa13.35□□□□□ -0.27
GPHN-201ENST00000315266 C14orf37Q86TY3 774 aa13.35□□□□□ -0.27
GPHN-201ENST00000315266 TRAPPC8Q9Y2L5 1435 aa13.35□□□□□ -0.27
GPHN-201ENST00000315266 SAMD9LQ8IVG5 1584 aa13.35□□□□□ -0.27
GPHN-201ENST00000315266 ADGRL2O95490 1459 aa13.35□□□□□ -0.27
GPHN-201ENST00000315266 ARHGEF5Q12774 1597 aa13.34□□□□□ -0.27
GPHN-201ENST00000315266 MBD5Q9P267 1494 aa13.33□□□□□ -0.28
GPHN-201ENST00000315266 GCC2Q8IWJ2 1684 aa13.33□□□□□ -0.28
GPHN-201ENST00000315266 ADGBQ8N7X0 1667 aa13.32□□□□□ -0.28
GPHN-201ENST00000315266 NPM2Q86SE8 214 aaKnown RBP13.32□□□□□ -0.28
GPHN-201ENST00000315266 WASHC2CQ9Y4E1 1318 aa13.32□□□□□ -0.28
GPHN-201ENST00000315266 RIMBP3CA6NJZ7 1639 aa13.31□□□□□ -0.28
GPHN-201ENST00000315266 RIMBP3BA6NNM3 1639 aa13.31□□□□□ -0.28
GPHN-201ENST00000315266 RIMBP3Q9UFD9 1639 aa13.31□□□□□ -0.28
GPHN-201ENST00000315266 DENND4BO75064 1496 aaPredicted RBP13.31□□□□□ -0.28
GPHN-201ENST00000315266 CCDC144AA2RUR9 1427 aa13.31□□□□□ -0.28
GPHN-201ENST00000315266 MAPKBP1O60336 1514 aa13.31□□□□□ -0.28
GPHN-201ENST00000315266 CDC42BPBQ9Y5S2 1711 aa13.31□□□□□ -0.28
GPHN-201ENST00000315266 RTL5Q5HYW3 569 aaPredicted RBP13.31□□□□□ -0.28
GPHN-201ENST00000315266 NUTM2FA1L443 756 aa13.3□□□□□ -0.28
GPHN-201ENST00000315266 ZNF518AQ6AHZ1 1483 aa13.3□□□□□ -0.28
GPHN-201ENST00000315266 CCER2I3L3R5 266 aa13.3□□□□□ -0.28
GPHN-201ENST00000315266 DAXXQ9UER7 740 aaPredicted RBP13.3□□□□□ -0.28
GPHN-201ENST00000315266 DUOX2Q9NRD8 1548 aa13.29□□□□□ -0.28
GPHN-201ENST00000315266 NBR1Q14596 966 aa13.29□□□□□ -0.28
GPHN-201ENST00000315266 RTEL1-TNFRSF6BF6WH68 1400 aa13.29□□□□□ -0.28
GPHN-201ENST00000315266 WDR43Q15061 677 aaKnown RBP eCLIP13.28□□□□□ -0.28
GPHN-201ENST00000315266 B4GALNT3Q6L9W6 998 aa13.28□□□□□ -0.28
GPHN-201ENST00000315266 ARAP3Q8WWN8 1544 aa13.28□□□□□ -0.28
GPHN-201ENST00000315266 ABCC1P33527 1531 aa13.27□□□□□ -0.28
GPHN-201ENST00000315266 TEX14Q8IWB6 1497 aa13.27□□□□□ -0.29
GPHN-201ENST00000315266 ERBINQ96RT1 1412 aa13.27□□□□□ -0.29
GPHN-201ENST00000315266 LMOD2Q6P5Q4 547 aa13.27□□□□□ -0.29
GPHN-201ENST00000315266 ABCA9Q8IUA7 1624 aa13.26□□□□□ -0.29
GPHN-201ENST00000315266 POGKQ9P215 609 aa13.26□□□□□ -0.29
GPHN-201ENST00000315266 CFAP74Q9C0B2 1584 aa13.26□□□□□ -0.29
GPHN-201ENST00000315266 ANKRD30BQ9BXX2 1392 aa13.26□□□□□ -0.29
GPHN-201ENST00000315266 CCDC136Q96JN2 1154 aa13.25□□□□□ -0.29
GPHN-201ENST00000315266 KNSTRNQ9Y448 316 aa13.25□□□□□ -0.29
GPHN-201ENST00000315266 DHX29Q7Z478 1369 aaKnown RBP13.25□□□□□ -0.29
GPHN-201ENST00000315266 NEFMP07197 916 aa13.25□□□□□ -0.29
GPHN-201ENST00000315266 NEO1Q92859 1461 aa13.25□□□□□ -0.29
GPHN-201ENST00000315266 ARHGEF12Q9NZN5 1544 aa13.23□□□□□ -0.29
GPHN-201ENST00000315266 CROCC2H7BZ55 1655 aa13.23□□□□□ -0.29
GPHN-201ENST00000315266 ATP7AQ04656 1500 aa13.23□□□□□ -0.29
GPHN-201ENST00000315266 ST20-MTHFSA0A0A6YYL1 179 aa13.23□□□□□ -0.29
GPHN-201ENST00000315266 KDM6BO15054 1643 aa13.23□□□□□ -0.29
GPHN-201ENST00000315266 A0A0G2JS52 829 aa13.22□□□□□ -0.29
GPHN-201ENST00000315266 ANP32AP39687 249 aaKnown RBP13.22□□□□□ -0.29
GPHN-201ENST00000315266 POGZQ7Z3K3 1410 aa13.21□□□□□ -0.3
GPHN-201ENST00000315266 TRAK1Q9UPV9 953 aa13.21□□□□□ -0.3
GPHN-201ENST00000315266 A2MP01023 1474 aa13.2□□□□□ -0.3
GPHN-201ENST00000315266 PZPP20742 1482 aa13.2□□□□□ -0.3
GPHN-201ENST00000315266 SRPK2P78362 688 aaKnown RBP13.2□□□□□ -0.3
GPHN-201ENST00000315266 FAM135AQ9P2D6 1515 aa13.19□□□□□ -0.3
GPHN-201ENST00000315266 PPP4R2Q9NY27 417 aa13.19□□□□□ -0.3
GPHN-201ENST00000315266 MAST1Q9Y2H9 1570 aa13.19□□□□□ -0.3
GPHN-201ENST00000315266 RPRD2Q5VT52 1461 aaKnown RBP13.18□□□□□ -0.3
GPHN-201ENST00000315266 U2SURPO15042 1029 aaKnown RBP13.17□□□□□ -0.3
GPHN-201ENST00000315266 LAS1LQ9Y4W2 734 aaKnown RBP13.17□□□□□ -0.3
GPHN-201ENST00000315266 ROCK2O75116 1388 aaKnown RBP13.16□□□□□ -0.3
GPHN-201ENST00000315266 PLXNC1O60486 1568 aa13.16□□□□□ -0.3
GPHN-201ENST00000315266 TSPOAP1O95153 1857 aa13.15□□□□□ -0.3
GPHN-201ENST00000315266 ZFYVE16Q7Z3T8 1539 aa13.14□□□□□ -0.31
GPHN-201ENST00000315266 TMF1P82094 1093 aa13.13□□□□□ -0.31
GPHN-201ENST00000315266 MLH3Q9UHC1 1453 aa13.13□□□□□ -0.31
GPHN-201ENST00000315266 STAC3Q96MF2 364 aa13.12□□□□□ -0.31
GPHN-201ENST00000315266 ZBTB47Q9UFB7 747 aaPredicted RBP13.11□□□□□ -0.31
GPHN-201ENST00000315266 NBPF8Q3BBV2 869 aa13.11□□□□□ -0.31
GPHN-201ENST00000315266 HECW2Q9P2P5 1572 aa13.11□□□□□ -0.31
GPHN-201ENST00000315266 TMEM132EQ6IEE7 984 aa13.1□□□□□ -0.31
GPHN-201ENST00000315266 NBPF1Q3BBV0 1214 aa13.09□□□□□ -0.31
GPHN-201ENST00000315266 FRAT1Q92837 279 aaPredicted RBP13.09□□□□□ -0.31
GPHN-201ENST00000315266 GLI2P10070 1586 aa13.09□□□□□ -0.31
GPHN-201ENST00000315266 KDM5DQ9BY66 1539 aa13.08□□□□□ -0.32
GPHN-201ENST00000315266 CCDC146Q8IYE0 955 aa13.08□□□□□ -0.32
GPHN-201ENST00000315266 USP47Q96K76 1375 aa13.07□□□□□ -0.32
GPHN-201ENST00000315266 HDGFP51858 240 aaKnown RBP13.07□□□□□ -0.32
GPHN-201ENST00000315266 DIP2BQ9P265 1576 aa13.07□□□□□ -0.32
GPHN-201ENST00000315266 PPP6R1Q9UPN7 881 aa13.06□□□□□ -0.32
GPHN-201ENST00000315266 ATP10AO60312 1499 aa13.06□□□□□ -0.32
GPHN-201ENST00000315266 YEATS2Q9ULM3 1422 aa13.06□□□□□ -0.32
GPHN-201ENST00000315266 VGFO15240 615 aaPredicted RBP13.06□□□□□ -0.32
GPHN-201ENST00000315266 CDCA8Q53HL2 280 aa13.06□□□□□ -0.32
GPHN-201ENST00000315266 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.06□□□□□ -0.325e-6■■■■□ 20.3
GPHN-201ENST00000315266 SLC52A1Q9NWF4 448 aa13.06□□□□□ -0.32
GPHN-201ENST00000315266 WASHC2AQ641Q2 1341 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms