RNA–Protein interactions for RNA: ENST00000313708.10

EBF1-201, Transcript of early B cell factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBF1, Length 5,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-201ENST00000313708 COG6Q9Y2V7 657 aa15.37■□□□□ 0.05
EBF1-201ENST00000313708 APPP05067 770 aa15.37■□□□□ 0.05
EBF1-201ENST00000313708 PAXIP1Q6ZW49 1069 aaPredicted RBP15.36■□□□□ 0.05
EBF1-201ENST00000313708 TAF3Q5VWG9 929 aa15.35■□□□□ 0.05
EBF1-201ENST00000313708 CLUAP1Q96AJ1 413 aa15.35■□□□□ 0.05
EBF1-201ENST00000313708 CCDC66A2RUB6 948 aa15.35■□□□□ 0.05
EBF1-201ENST00000313708 FOXD4L5Q5VV16 416 aaPredicted RBP15.35■□□□□ 0.05
EBF1-201ENST00000313708 FOXD4L4Q8WXT5 416 aaPredicted RBP15.35■□□□□ 0.05
EBF1-201ENST00000313708 KIF27Q86VH2 1401 aa15.35■□□□□ 0.05
EBF1-201ENST00000313708 AEBP1Q8IUX7 1158 aa15.35■□□□□ 0.05
EBF1-201ENST00000313708 ROCK2O75116 1388 aaKnown RBP15.34■□□□□ 0.05
EBF1-201ENST00000313708 TAF7LQ5H9L4 462 aa15.34■□□□□ 0.05
EBF1-201ENST00000313708 VGLL3A8MV65 326 aa15.33■□□□□ 0.05
EBF1-201ENST00000313708 MCTP1Q6DN14 999 aa15.33■□□□□ 0.05
EBF1-201ENST00000313708 CCDC146Q8IYE0 955 aa15.33■□□□□ 0.05
EBF1-201ENST00000313708 MAPKBP1O60336 1514 aa15.33■□□□□ 0.04
EBF1-201ENST00000313708 SYAP1Q96A49 352 aaPredicted RBP15.33■□□□□ 0.04
EBF1-201ENST00000313708 CAVIN1Q6NZI2 390 aaKnown RBP15.33■□□□□ 0.04
EBF1-201ENST00000313708 E9PSI1 815 aa15.32■□□□□ 0.04
EBF1-201ENST00000313708 RNF214Q8ND24 703 aa15.32■□□□□ 0.04
EBF1-201ENST00000313708 CHMP4AQ9BY43 222 aa15.32■□□□□ 0.04
EBF1-201ENST00000313708 RGL3Q3MIN7 710 aa15.32■□□□□ 0.04
EBF1-201ENST00000313708 SASS6Q6UVJ0 657 aa15.32■□□□□ 0.04
EBF1-201ENST00000313708 C20orf194Q5TEA3 1177 aa15.32■□□□□ 0.04
EBF1-201ENST00000313708 PHLDB1Q86UU1 1377 aa15.31■□□□□ 0.04
EBF1-201ENST00000313708 DYNC1I1O14576 645 aa15.31■□□□□ 0.04
EBF1-201ENST00000313708 CASC1Q6TDU7 716 aa15.31■□□□□ 0.04
EBF1-201ENST00000313708 CENPJQ9HC77 1338 aaPredicted RBP15.31■□□□□ 0.04
EBF1-201ENST00000313708 CGNL1Q0VF96 1302 aa15.3■□□□□ 0.04
EBF1-201ENST00000313708 HMGN5P82970 282 aaKnown RBP15.3■□□□□ 0.04
EBF1-201ENST00000313708 C8orf34Q49A92 452 aa15.3■□□□□ 0.04
EBF1-201ENST00000313708 TBC1D2Q9BYX2 928 aa15.3■□□□□ 0.04
EBF1-201ENST00000313708 USP47Q96K76 1375 aa15.29■□□□□ 0.04
EBF1-201ENST00000313708 MPNDQ8N594 471 aa15.29■□□□□ 0.04
EBF1-201ENST00000313708 UACAQ9BZF9 1416 aa15.28■□□□□ 0.04
EBF1-201ENST00000313708 OFD1O75665 1012 aa15.28■□□□□ 0.04
EBF1-201ENST00000313708 PPP4R3BQ5MIZ7 849 aa15.28■□□□□ 0.04
EBF1-201ENST00000313708 BRD4O60885 1362 aaPredicted RBP15.28■□□□□ 0.04
EBF1-201ENST00000313708 SPDYE4A6NLX3 237 aa15.28■□□□□ 0.04
EBF1-201ENST00000313708 PDCL2Q8N4E4 241 aa15.27■□□□□ 0.03
EBF1-201ENST00000313708 CCDC94Q9BW85 323 aaPredicted RBP15.26■□□□□ 0.03
EBF1-201ENST00000313708 LETM1O95202 739 aaPredicted RBP15.26■□□□□ 0.03
EBF1-201ENST00000313708 ITPRIPQ8IWB1 547 aa15.25■□□□□ 0.03
EBF1-201ENST00000313708 DIAPH3Q9NSV4 1193 aa15.25■□□□□ 0.03
EBF1-201ENST00000313708 GOLGA6L6A8MZA4 724 aa15.25■□□□□ 0.03
EBF1-201ENST00000313708 SMARCA2P51531 1590 aa15.25■□□□□ 0.03
EBF1-201ENST00000313708 PANK1Q8TE04 598 aa15.24■□□□□ 0.03
EBF1-201ENST00000313708 ST20-MTHFSA0A0A6YYL1 179 aa15.24■□□□□ 0.03
EBF1-201ENST00000313708 ERICH4A6NGS2 130 aa15.24■□□□□ 0.03
EBF1-201ENST00000313708 KIF3AQ9Y496 699 aa15.24■□□□□ 0.03
EBF1-201ENST00000313708 PHF14O94880 888 aa15.24■□□□□ 0.03
EBF1-201ENST00000313708 KCNJ4P48050 445 aa15.24■□□□□ 0.03
EBF1-201ENST00000313708 BCL2L13Q9BXK5 485 aa15.24■□□□□ 0.03
EBF1-201ENST00000313708 GTPBP4Q9BZE4 634 aaKnown RBP15.23■□□□□ 0.03
EBF1-201ENST00000313708 ARAP1Q96P48 1450 aa15.23■□□□□ 0.03
EBF1-201ENST00000313708 FOXD4L6Q3SYB3 417 aaPredicted RBP15.23■□□□□ 0.03
EBF1-201ENST00000313708 FOXD4L3Q6VB84 417 aaPredicted RBP15.23■□□□□ 0.03
EBF1-201ENST00000313708 ZNF592Q92610 1267 aa15.23■□□□□ 0.03
EBF1-201ENST00000313708 IGSF3O75054 1194 aa15.23■□□□□ 0.03
EBF1-201ENST00000313708 TOP2AP11388 1531 aaKnown RBP15.22■□□□□ 0.03
EBF1-201ENST00000313708 TMF1P82094 1093 aa15.21■□□□□ 0.03
EBF1-201ENST00000313708 PDZRN3Q9UPQ7 1066 aa15.2■□□□□ 0.02
EBF1-201ENST00000313708 TRERF1Q96PN7 1200 aa15.2■□□□□ 0.02
EBF1-201ENST00000313708 TNPO1Q92973 898 aaKnown RBP15.19■□□□□ 0.02
EBF1-201ENST00000313708 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.19■□□□□ 0.02
EBF1-201ENST00000313708 RNF123Q5XPI4 1314 aa15.19■□□□□ 0.02
EBF1-201ENST00000313708 PRPF40AO75400 957 aaKnown RBP15.18■□□□□ 0.02
EBF1-201ENST00000313708 IRX3P78415 501 aaPredicted RBP15.18■□□□□ 0.02
EBF1-201ENST00000313708 NBPF8Q3BBV2 869 aa15.18■□□□□ 0.02
EBF1-201ENST00000313708 EIF3AQ14152 1382 aaKnown RBP15.18■□□□□ 0.02
EBF1-201ENST00000313708 NOL8Q76FK4 1167 aaKnown RBP15.17■□□□□ 0.02
EBF1-201ENST00000313708 BCAR3O75815 825 aa15.17■□□□□ 0.02
EBF1-201ENST00000313708 NUCB2P80303 420 aa15.17■□□□□ 0.02
EBF1-201ENST00000313708 PKD2Q13563 968 aa15.17■□□□□ 0.02
EBF1-201ENST00000313708 KIF20AO95235 890 aa15.16■□□□□ 0.02
EBF1-201ENST00000313708 KIF16BQ96L93 1317 aa15.16■□□□□ 0.02
EBF1-201ENST00000313708 U2SURPO15042 1029 aaKnown RBP15.16■□□□□ 0.02
EBF1-201ENST00000313708 CUX2O14529 1486 aa15.16■□□□□ 0.02
EBF1-201ENST00000313708 LRRC9Q6ZRR7 1453 aa15.16■□□□□ 0.02
EBF1-201ENST00000313708 SMARCA4P51532 1647 aa15.15■□□□□ 0.02
EBF1-201ENST00000313708 PANK3Q9H999 370 aa15.15■□□□□ 0.02
EBF1-201ENST00000313708 APAF1O14727 1248 aa15.15■□□□□ 0.02
EBF1-201ENST00000313708 GOLGA6L1Q8N7Z2 621 aa15.15■□□□□ 0.02
EBF1-201ENST00000313708 ST18O60284 1047 aa15.15■□□□□ 0.02
EBF1-201ENST00000313708 IPO4Q8TEX9 1081 aaKnown RBP15.15■□□□□ 0.02
EBF1-201ENST00000313708 ADAMTS8Q9UP79 889 aa15.15■□□□□ 0.02
EBF1-201ENST00000313708 TEX35Q5T0J7 233 aa15.14■□□□□ 0.01
EBF1-201ENST00000313708 NCOA1Q15788 1441 aa15.14■□□□□ 0.01
EBF1-201ENST00000313708 DMTNQ08495 405 aa15.14■□□□□ 0.01
EBF1-201ENST00000313708 GOLGA6L4A6NEF3 574 aa15.13■□□□□ 0.01
EBF1-201ENST00000313708 CDCA8Q53HL2 280 aa15.13■□□□□ 0.01
EBF1-201ENST00000313708 TSPY26PQ9H489 355 aa15.13■□□□□ 0.01
EBF1-201ENST00000313708 CIZ1Q9ULV3 898 aaPredicted RBP15.13■□□□□ 0.01
EBF1-201ENST00000313708 HTATSF1O43719 755 aaKnown RBP15.13■□□□□ 0.01
EBF1-201ENST00000313708 IFT57Q9NWB7 429 aa15.13■□□□□ 0.01
EBF1-201ENST00000313708 SEC24BO95487 1268 aa15.13■□□□□ 0.01
EBF1-201ENST00000313708 TBC1D32Q96NH3 1257 aa15.13■□□□□ 0.01
EBF1-201ENST00000313708 DNAJC2Q99543 621 aaKnown RBP15.12■□□□□ 0.01
EBF1-201ENST00000313708 SMC4Q9NTJ3 1288 aa15.12■□□□□ 0.01
EBF1-201ENST00000313708 ERICH3Q5RHP9 1530 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms