RNA–Protein interactions for RNA: ENST00000312849.4

LSMEM1-201, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSMEM1, Length 1,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-201ENST00000312849 HNRNPMP52272 730 aaKnown RBP eCLIP13.13□□□□□ -0.31
LSMEM1-201ENST00000312849 CARD11Q9BXL7 1154 aa13.13□□□□□ -0.31
LSMEM1-201ENST00000312849 LAMC1P11047 1609 aa13.13□□□□□ -0.31
LSMEM1-201ENST00000312849 TRPM1Q7Z4N2 1603 aa13.11□□□□□ -0.31
LSMEM1-201ENST00000312849 IQGAP3Q86VI3 1631 aa13.1□□□□□ -0.31
LSMEM1-201ENST00000312849 ARHGAP5Q13017 1502 aa13.1□□□□□ -0.31
LSMEM1-201ENST00000312849 SYCP2Q9BX26 1530 aa13.09□□□□□ -0.31
LSMEM1-201ENST00000312849 TTC37Q6PGP7 1564 aa13.09□□□□□ -0.31
LSMEM1-201ENST00000312849 RALBP1Q15311 655 aa13.09□□□□□ -0.31
LSMEM1-201ENST00000312849 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.09□□□□□ -0.31
LSMEM1-201ENST00000312849 ABCC2Q92887 1545 aa13.09□□□□□ -0.31
LSMEM1-201ENST00000312849 CCDC144AA2RUR9 1427 aa13.09□□□□□ -0.31
LSMEM1-201ENST00000312849 BRD4O60885 1362 aaPredicted RBP13.08□□□□□ -0.31
LSMEM1-201ENST00000312849 IRX6P78412 446 aaPredicted RBP13.08□□□□□ -0.32
LSMEM1-201ENST00000312849 DCAF11Q8TEB1 546 aa13.08□□□□□ -0.32
LSMEM1-201ENST00000312849 EIF2AK4Q9P2K8 1649 aaKnown RBP13.08□□□□□ -0.32
LSMEM1-201ENST00000312849 FANCIQ9NVI1 1328 aa13.08□□□□□ -0.32
LSMEM1-201ENST00000312849 NUDCQ9Y266 331 aa13.08□□□□□ -0.32
LSMEM1-201ENST00000312849 DUOX2Q9NRD8 1548 aa13.08□□□□□ -0.32
LSMEM1-201ENST00000312849 PRAG1Q86YV5 1406 aa13.08□□□□□ -0.32
LSMEM1-201ENST00000312849 POLR3GLQ9BT43 218 aa13.07□□□□□ -0.32
LSMEM1-201ENST00000312849 TMC1Q8TDI8 760 aa13.06□□□□□ -0.32
LSMEM1-201ENST00000312849 PNISRQ8TF01 805 aaKnown RBP13.06□□□□□ -0.32
LSMEM1-201ENST00000312849 RNF123Q5XPI4 1314 aa13.06□□□□□ -0.32
LSMEM1-201ENST00000312849 GPRASP1Q5JY77 1395 aa13.06□□□□□ -0.32
LSMEM1-201ENST00000312849 ST20-MTHFSA0A0A6YYL1 179 aa13.06□□□□□ -0.32
LSMEM1-201ENST00000312849 KDM2AQ9Y2K7 1162 aa13.06□□□□□ -0.32
LSMEM1-201ENST00000312849 ATP10AO60312 1499 aa13.06□□□□□ -0.32
LSMEM1-201ENST00000312849 MYBBP1AQ9BQG0 1328 aaKnown RBP13.05□□□□□ -0.32
LSMEM1-201ENST00000312849 LRPPRCP42704 1394 aaKnown RBP13.05□□□□□ -0.32
LSMEM1-201ENST00000312849 ERBINQ96RT1 1412 aa13.04□□□□□ -0.32
LSMEM1-201ENST00000312849 MAGI2Q86UL8 1455 aa13.04□□□□□ -0.32
LSMEM1-201ENST00000312849 PRDM15P57071 1507 aaPredicted RBP13.02□□□□□ -0.32
LSMEM1-201ENST00000312849 WASHC2CQ9Y4E1 1318 aa13.02□□□□□ -0.32
LSMEM1-201ENST00000312849 UHRF1BP1LA0JNW5 1464 aa13.02□□□□□ -0.33
LSMEM1-201ENST00000312849 PLA2R1Q13018 1463 aa13.02□□□□□ -0.33
LSMEM1-201ENST00000312849 A2MP01023 1474 aa13.01□□□□□ -0.33
LSMEM1-201ENST00000312849 PLCH2O75038 1416 aa13.01□□□□□ -0.33
LSMEM1-201ENST00000312849 INSRP06213 1382 aa13□□□□□ -0.33
LSMEM1-201ENST00000312849 ZCCHC11Q5TAX3 1644 aaKnown RBP13□□□□□ -0.33
LSMEM1-201ENST00000312849 ZMYM4Q5VZL5 1548 aa13□□□□□ -0.33
LSMEM1-201ENST00000312849 COL17A1Q9UMD9 1497 aaPredicted RBP13□□□□□ -0.33
LSMEM1-201ENST00000312849 PARD3Q8TEW0 1356 aa12.99□□□□□ -0.33
LSMEM1-201ENST00000312849 ARAP3Q8WWN8 1544 aa12.99□□□□□ -0.33
LSMEM1-201ENST00000312849 EFCAB2Q5VUJ9 269 aa12.98□□□□□ -0.33
LSMEM1-201ENST00000312849 NLRP13Q86W25 1043 aa12.98□□□□□ -0.33
LSMEM1-201ENST00000312849 RNF17Q9BXT8 1623 aaKnown RBP12.98□□□□□ -0.33
LSMEM1-201ENST00000312849 ABCC1P33527 1531 aa12.98□□□□□ -0.33
LSMEM1-201ENST00000312849 B4GALNT3Q6L9W6 998 aa12.97□□□□□ -0.33
LSMEM1-201ENST00000312849 PDE3BQ13370 1112 aa12.97□□□□□ -0.33
LSMEM1-201ENST00000312849 STAC3Q96MF2 364 aa12.97□□□□□ -0.33
LSMEM1-201ENST00000312849 RTEL1-TNFRSF6BF6WH68 1400 aa12.96□□□□□ -0.33
LSMEM1-201ENST00000312849 ERCC6L2Q5T890 1561 aa12.96□□□□□ -0.34
LSMEM1-201ENST00000312849 CLASP1Q7Z460 1538 aa12.96□□□□□ -0.34
LSMEM1-201ENST00000312849 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.95□□□□□ -0.34
LSMEM1-201ENST00000312849 CNGB1Q14028 1251 aaPredicted RBP12.94□□□□□ -0.34
LSMEM1-201ENST00000312849 RGL3Q3MIN7 710 aa12.94□□□□□ -0.34
LSMEM1-201ENST00000312849 CEP152O94986 1710 aa12.94□□□□□ -0.34
LSMEM1-201ENST00000312849 PER1O15534 1290 aaPredicted RBP12.93□□□□□ -0.34
LSMEM1-201ENST00000312849 TMF1P82094 1093 aa12.93□□□□□ -0.34
LSMEM1-201ENST00000312849 NBPF1Q3BBV0 1214 aa12.93□□□□□ -0.34
LSMEM1-201ENST00000312849 TESK2Q96S53 571 aa12.93□□□□□ -0.34
LSMEM1-201ENST00000312849 SPHKAPQ2M3C7 1700 aa12.92□□□□□ -0.34
LSMEM1-201ENST00000312849 CCDC136Q96JN2 1154 aa12.92□□□□□ -0.34
LSMEM1-201ENST00000312849 IQGAP1P46940 1657 aa12.92□□□□□ -0.34
LSMEM1-201ENST00000312849 DEPDC5O75140 1603 aa12.92□□□□□ -0.34
LSMEM1-201ENST00000312849 MSH5O43196 834 aa12.91□□□□□ -0.34
LSMEM1-201ENST00000312849 ERICH6Q7L0X2 663 aa12.91□□□□□ -0.34
LSMEM1-201ENST00000312849 MADDQ8WXG6 1647 aa12.91□□□□□ -0.34
LSMEM1-201ENST00000312849 TRPM2O94759 1503 aa12.91□□□□□ -0.34
LSMEM1-201ENST00000312849 TET3O43151 1660 aa12.9□□□□□ -0.34
LSMEM1-201ENST00000312849 NEURL4Q96JN8 1562 aa12.9□□□□□ -0.34
LSMEM1-201ENST00000312849 KIAA1210Q9ULL0 1709 aa12.9□□□□□ -0.34
LSMEM1-201ENST00000312849 DISP3Q9P2K9 1392 aa12.89□□□□□ -0.35
LSMEM1-201ENST00000312849 PTPRTO14522 1441 aa12.89□□□□□ -0.35
LSMEM1-201ENST00000312849 BLMP54132 1417 aaPredicted RBP12.89□□□□□ -0.35
LSMEM1-201ENST00000312849 SCAPERQ9BY12 1400 aa12.89□□□□□ -0.35
LSMEM1-201ENST00000312849 TRAPPC8Q9Y2L5 1435 aa12.89□□□□□ -0.35
LSMEM1-201ENST00000312849 SPAG9O60271 1321 aaKnown RBP12.88□□□□□ -0.35
LSMEM1-201ENST00000312849 ZFYVE16Q7Z3T8 1539 aa12.88□□□□□ -0.35
LSMEM1-201ENST00000312849 CDCA8Q53HL2 280 aa12.88□□□□□ -0.35
LSMEM1-201ENST00000312849 RRP1P56182 461 aaKnown RBP12.87□□□□□ -0.35
LSMEM1-201ENST00000312849 PANK3Q9H999 370 aa12.87□□□□□ -0.35
LSMEM1-201ENST00000312849 RCAN3Q9UKA8 241 aa12.87□□□□□ -0.35
LSMEM1-201ENST00000312849 SYNMO15061 1565 aa12.86□□□□□ -0.35
LSMEM1-201ENST00000312849 INO80Q9ULG1 1556 aaPredicted RBP12.86□□□□□ -0.35
LSMEM1-201ENST00000312849 MYT1LQ9UL68 1186 aa12.86□□□□□ -0.35
LSMEM1-201ENST00000312849 KANK1Q14678 1352 aa12.86□□□□□ -0.35
LSMEM1-201ENST00000312849 WDR7Q9Y4E6 1490 aa12.86□□□□□ -0.35
LSMEM1-201ENST00000312849 VWDEQ8N2E2 1590 aa12.85□□□□□ -0.35
LSMEM1-201ENST00000312849 ABCA9Q8IUA7 1624 aa12.85□□□□□ -0.35
LSMEM1-201ENST00000312849 SLC24A1O60721 1099 aa12.85□□□□□ -0.35
LSMEM1-201ENST00000312849 SCAF11Q99590 1463 aaKnown RBP12.85□□□□□ -0.35
LSMEM1-201ENST00000312849 CLTCL1P53675 1640 aa12.85□□□□□ -0.35
LSMEM1-201ENST00000312849 ATP7AQ04656 1500 aa12.84□□□□□ -0.35
LSMEM1-201ENST00000312849 EIF3AQ14152 1382 aaKnown RBP12.83□□□□□ -0.36
LSMEM1-201ENST00000312849 CC2D1BQ5T0F9 858 aaKnown RBP12.82□□□□□ -0.36
LSMEM1-201ENST00000312849 NPC1L1Q9UHC9 1359 aa12.81□□□□□ -0.36
LSMEM1-201ENST00000312849 KIF1BO60333 1816 aa12.81□□□□□ -0.36
LSMEM1-201ENST00000312849 KDM5AP29375 1690 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms