RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 GOLGA6L19H0YKK7 550 aa16.93■□□□□ 0.3
CLCN6-201ENST00000312413 SLC4A10Q6U841 1118 aa16.92■□□□□ 0.3
CLCN6-201ENST00000312413 GPS2Q13227 327 aa16.92■□□□□ 0.3
CLCN6-201ENST00000312413 ZNF771Q7L3S4 317 aaPredicted RBP16.92■□□□□ 0.3
CLCN6-201ENST00000312413 SMARCA2P51531 1590 aa16.92■□□□□ 0.3
CLCN6-201ENST00000312413 SOGA1O94964 1423 aa16.91■□□□□ 0.3
CLCN6-201ENST00000312413 EIF3AQ14152 1382 aaKnown RBP16.91■□□□□ 0.3
CLCN6-201ENST00000312413 BECN2A8MW95 431 aa16.9■□□□□ 0.3
CLCN6-201ENST00000312413 L3MBTL2Q969R5 705 aa16.9■□□□□ 0.3
CLCN6-201ENST00000312413 NUP155O75694 1391 aa16.89■□□□□ 0.29
CLCN6-201ENST00000312413 LMOD3Q0VAK6 560 aa16.89■□□□□ 0.29
CLCN6-201ENST00000312413 CCAR2Q8N163 923 aaKnown RBP16.89■□□□□ 0.29
CLCN6-201ENST00000312413 RRP1P56182 461 aaKnown RBP16.88■□□□□ 0.29
CLCN6-201ENST00000312413 EXOC6Q8TAG9 804 aa16.88■□□□□ 0.29
CLCN6-201ENST00000312413 CEP89Q96ST8 783 aa16.88■□□□□ 0.29
CLCN6-201ENST00000312413 CHMP3Q9Y3E7 222 aa16.88■□□□□ 0.29
CLCN6-201ENST00000312413 FMN1Q68DA7 1419 aa16.88■□□□□ 0.29
CLCN6-201ENST00000312413 MYBBP1AQ9BQG0 1328 aaKnown RBP16.88■□□□□ 0.29
CLCN6-201ENST00000312413 FAM13BQ9NYF5 915 aa16.88■□□□□ 0.29
CLCN6-201ENST00000312413 ZNF330Q9Y3S2 320 aaPredicted RBP16.88■□□□□ 0.29
CLCN6-201ENST00000312413 PDE4CQ08493 712 aa16.87■□□□□ 0.29
CLCN6-201ENST00000312413 KIF15Q9NS87 1388 aa16.87■□□□□ 0.29
CLCN6-201ENST00000312413 H3BQV1 296 aa16.87■□□□□ 0.29
CLCN6-201ENST00000312413 IFFO2Q5TF58 517 aa16.87■□□□□ 0.29
CLCN6-201ENST00000312413 TSR1Q2NL82 804 aaKnown RBP16.86■□□□□ 0.29
CLCN6-201ENST00000312413 TERF2IPQ9NYB0 399 aa16.86■□□□□ 0.29
CLCN6-201ENST00000312413 TAF7LQ5H9L4 462 aa16.86■□□□□ 0.29
CLCN6-201ENST00000312413 ZBED9Q6R2W3 1325 aa16.86■□□□□ 0.29
CLCN6-201ENST00000312413 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.85■□□□□ 0.29
CLCN6-201ENST00000312413 CHMP4CQ96CF2 233 aa16.85■□□□□ 0.29
CLCN6-201ENST00000312413 CGNL1Q0VF96 1302 aa16.85■□□□□ 0.29
CLCN6-201ENST00000312413 ANKRD45Q5TZF3 282 aa16.85■□□□□ 0.29
CLCN6-201ENST00000312413 GGT6Q6P531 493 aa16.85■□□□□ 0.29
CLCN6-201ENST00000312413 PLIN1O60240 522 aa16.84■□□□□ 0.29
CLCN6-201ENST00000312413 ZNF592Q92610 1267 aa16.84■□□□□ 0.29
CLCN6-201ENST00000312413 TPD52L1Q16890 204 aaPredicted RBP16.84■□□□□ 0.29
CLCN6-201ENST00000312413 FAM184AQ8NB25 1140 aa16.84■□□□□ 0.29
CLCN6-201ENST00000312413 CHMP5Q9NZZ3 219 aa16.84■□□□□ 0.29
CLCN6-201ENST00000312413 CRBNQ96SW2 442 aa16.84■□□□□ 0.29
CLCN6-201ENST00000312413 PES1O00541 588 aaKnown RBP16.84■□□□□ 0.29
CLCN6-201ENST00000312413 FOXD4L6Q3SYB3 417 aaPredicted RBP16.84■□□□□ 0.29
CLCN6-201ENST00000312413 FOXD4L3Q6VB84 417 aaPredicted RBP16.84■□□□□ 0.29
CLCN6-201ENST00000312413 TPM1P09493 284 aa16.83■□□□□ 0.29
CLCN6-201ENST00000312413 CCDC70Q6NSX1 233 aa16.83■□□□□ 0.29
CLCN6-201ENST00000312413 FAM43AQ8N2R8 423 aa16.83■□□□□ 0.29
CLCN6-201ENST00000312413 EIF4G1Q04637 1599 aaKnown RBP16.83■□□□□ 0.29
CLCN6-201ENST00000312413 PAK3O75914 559 aaPredicted RBP16.83■□□□□ 0.28
CLCN6-201ENST00000312413 CUX2O14529 1486 aa16.83■□□□□ 0.28
CLCN6-201ENST00000312413 ANKRD30AQ9BXX3 1397 aa16.83■□□□□ 0.28
CLCN6-201ENST00000312413 TEX35Q5T0J7 233 aa16.82■□□□□ 0.28
CLCN6-201ENST00000312413 ZKSCAN2Q63HK3 967 aa16.82■□□□□ 0.28
CLCN6-201ENST00000312413 RILPL2Q969X0 211 aa16.82■□□□□ 0.28
CLCN6-201ENST00000312413 PRM3Q9NNZ6 103 aa16.82■□□□□ 0.28
CLCN6-201ENST00000312413 PDS5BQ9NTI5 1447 aa16.82■□□□□ 0.28
CLCN6-201ENST00000312413 E9PSI1 815 aa16.81■□□□□ 0.28
CLCN6-201ENST00000312413 TOMM22Q9NS69 142 aa16.81■□□□□ 0.28
CLCN6-201ENST00000312413 CSB-PGBD3P0DP91 1061 aa16.81■□□□□ 0.28
CLCN6-201ENST00000312413 MLECQ14165 292 aa16.81■□□□□ 0.28
CLCN6-201ENST00000312413 PRKRIP1Q9H875 184 aaPredicted RBP16.81■□□□□ 0.28
CLCN6-201ENST00000312413 BCL2L13Q9BXK5 485 aa16.79■□□□□ 0.28
CLCN6-201ENST00000312413 RRP7AQ9Y3A4 280 aaKnown RBP16.79■□□□□ 0.28
CLCN6-201ENST00000312413 REC8O95072 547 aa16.79■□□□□ 0.28
CLCN6-201ENST00000312413 COG6Q9Y2V7 657 aa16.79■□□□□ 0.28
CLCN6-201ENST00000312413 MARCH6O60337 910 aa16.76■□□□□ 0.27
CLCN6-201ENST00000312413 TPM2P07951 284 aa16.76■□□□□ 0.27
CLCN6-201ENST00000312413 HOMER1Q86YM7 354 aa16.76■□□□□ 0.27
CLCN6-201ENST00000312413 IPO7O95373 1038 aaKnown RBP16.75■□□□□ 0.27
CLCN6-201ENST00000312413 CALRP27797 417 aaKnown RBP16.75■□□□□ 0.27
CLCN6-201ENST00000312413 MCTP1Q6DN14 999 aa16.75■□□□□ 0.27
CLCN6-201ENST00000312413 PANK3Q9H999 370 aa16.74■□□□□ 0.27
CLCN6-201ENST00000312413 DIAPH3Q9NSV4 1193 aa16.74■□□□□ 0.27
CLCN6-201ENST00000312413 ST20-MTHFSA0A0A6YYL1 179 aa16.73■□□□□ 0.27
CLCN6-201ENST00000312413 NUCB2P80303 420 aa16.73■□□□□ 0.27
CLCN6-201ENST00000312413 ELL2O00472 640 aaPredicted RBP16.73■□□□□ 0.27
CLCN6-201ENST00000312413 DDX19BQ9UMR2 479 aa16.73■□□□□ 0.27
CLCN6-201ENST00000312413 ZKSCAN1P17029 563 aaPredicted RBP16.73■□□□□ 0.27
CLCN6-201ENST00000312413 RUFY2Q8WXA3 655 aa16.73■□□□□ 0.27
CLCN6-201ENST00000312413 NFKBIBQ15653 356 aa16.72■□□□□ 0.27
CLCN6-201ENST00000312413 CPLX2Q6PUV4 134 aaKnown RBP16.72■□□□□ 0.27
CLCN6-201ENST00000312413 AKAP17AQ02040 695 aaKnown RBP16.72■□□□□ 0.27
CLCN6-201ENST00000312413 PATL2C9JE40 543 aaKnown RBP16.71■□□□□ 0.27
CLCN6-201ENST00000312413 MTERF4Q7Z6M4 381 aaKnown RBP16.71■□□□□ 0.27
CLCN6-201ENST00000312413 ARGLU1Q9NWB6 273 aaPredicted RBP16.71■□□□□ 0.27
CLCN6-201ENST00000312413 MAP7D2Q96T17 732 aa16.71■□□□□ 0.27
CLCN6-201ENST00000312413 MRE11P49959 708 aa16.71■□□□□ 0.27
CLCN6-201ENST00000312413 BICD2Q8TD16 824 aa16.71■□□□□ 0.27
CLCN6-201ENST00000312413 AMPHP49418 695 aa16.7■□□□□ 0.26
CLCN6-201ENST00000312413 DHX57Q6P158 1386 aaKnown RBP16.7■□□□□ 0.26
CLCN6-201ENST00000312413 ANKRD20A12PQ8NF67 263 aa16.7■□□□□ 0.26
CLCN6-201ENST00000312413 TMX4Q9H1E5 349 aaPredicted RBP16.7■□□□□ 0.26
CLCN6-201ENST00000312413 EFCAB2Q5VUJ9 269 aa16.7■□□□□ 0.26
CLCN6-201ENST00000312413 SYNE3Q6ZMZ3 975 aa16.69■□□□□ 0.26
CLCN6-201ENST00000312413 NOM1Q5C9Z4 860 aaKnown RBP16.68■□□□□ 0.26
CLCN6-201ENST00000312413 IFT57Q9NWB7 429 aa16.68■□□□□ 0.26
CLCN6-201ENST00000312413 FRAT2O75474 233 aaPredicted RBP16.68■□□□□ 0.26
CLCN6-201ENST00000312413 MNS1Q8NEH6 495 aa16.68■□□□□ 0.26
CLCN6-201ENST00000312413 VPS53Q5VIR6 699 aa16.68■□□□□ 0.26
CLCN6-201ENST00000312413 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.68■□□□□ 0.26
CLCN6-201ENST00000312413 NGEFQ8N5V2 710 aa16.68■□□□□ 0.26
CLCN6-201ENST00000312413 APAF1O14727 1248 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms