RNA–Protein interactions for RNA: ENST00000311330.3

CD248-201, Transcript of CD248 molecule, humanhuman

APPRIS P1 BASIC

Gene CD248, Length 2,558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD248-201ENST00000311330 AFAP1Q8N556 730 aa25.46■■□□□ 1.67
CD248-201ENST00000311330 POLR1AO95602 1720 aaPredicted RBP25.45■■□□□ 1.67
CD248-201ENST00000311330 CCDC144AA2RUR9 1427 aa25.45■■□□□ 1.66
CD248-201ENST00000311330 PLA2R1Q13018 1463 aa25.45■■□□□ 1.66
CD248-201ENST00000311330 ABCC1P33527 1531 aa25.45■■□□□ 1.66
CD248-201ENST00000311330 DUOX2Q9NRD8 1548 aa25.44■■□□□ 1.66
CD248-201ENST00000311330 FKBP8Q14318 412 aa25.42■■□□□ 1.66
CD248-201ENST00000311330 BCANQ96GW7 911 aa25.41■■□□□ 1.66
CD248-201ENST00000311330 ST20-MTHFSA0A0A6YYL1 179 aa25.4■■□□□ 1.66
CD248-201ENST00000311330 SPAG9O60271 1321 aaKnown RBP25.4■■□□□ 1.66
CD248-201ENST00000311330 MRS2Q9HD23 443 aa25.39■■□□□ 1.66
CD248-201ENST00000311330 IQGAP3Q86VI3 1631 aa25.38■■□□□ 1.65
CD248-201ENST00000311330 FAM9BQ8IZU0 186 aa25.38■■□□□ 1.65
CD248-201ENST00000311330 WDR7Q9Y4E6 1490 aa25.38■■□□□ 1.65
CD248-201ENST00000311330 ERBINQ96RT1 1412 aa25.38■■□□□ 1.65
CD248-201ENST00000311330 ROCK2O75116 1388 aaKnown RBP25.36■■□□□ 1.65
CD248-201ENST00000311330 DHX29Q7Z478 1369 aaKnown RBP25.34■■□□□ 1.65
CD248-201ENST00000311330 NBPF1Q3BBV0 1214 aa25.34■■□□□ 1.65
CD248-201ENST00000311330 MAGI2Q86UL8 1455 aa25.32■■□□□ 1.64
CD248-201ENST00000311330 PRAG1Q86YV5 1406 aa25.32■■□□□ 1.64
CD248-201ENST00000311330 A2MP01023 1474 aa25.31■■□□□ 1.64
CD248-201ENST00000311330 FANCAO15360 1455 aa25.3■■□□□ 1.64
CD248-201ENST00000311330 MYT1LQ9UL68 1186 aa25.3■■□□□ 1.64
CD248-201ENST00000311330 ARID4BQ4LE39 1312 aaPredicted RBP25.28■■□□□ 1.64
CD248-201ENST00000311330 ASXL2Q76L83 1435 aa25.28■■□□□ 1.64
CD248-201ENST00000311330 ZFYVE16Q7Z3T8 1539 aa25.28■■□□□ 1.64
CD248-201ENST00000311330 ARAP3Q8WWN8 1544 aa25.28■■□□□ 1.64
CD248-201ENST00000311330 NEFLP07196 543 aa25.27■■□□□ 1.64
CD248-201ENST00000311330 OSCARQ8IYS5 282 aa25.26■■□□□ 1.63
CD248-201ENST00000311330 RTEL1-TNFRSF6BF6WH68 1400 aa25.25■■□□□ 1.63
CD248-201ENST00000311330 TRPM1Q7Z4N2 1603 aa25.25■■□□□ 1.63
CD248-201ENST00000311330 SCAPERQ9BY12 1400 aa25.23■■□□□ 1.63
CD248-201ENST00000311330 ABCA9Q8IUA7 1624 aa25.23■■□□□ 1.63
CD248-201ENST00000311330 ATP10AO60312 1499 aa25.22■■□□□ 1.63
CD248-201ENST00000311330 ADGRL1O94910 1474 aa25.22■■□□□ 1.63
CD248-201ENST00000311330 ATP7AQ04656 1500 aa25.19■■□□□ 1.62
CD248-201ENST00000311330 KIF3BO15066 747 aa25.19■■□□□ 1.62
CD248-201ENST00000311330 E9PCH4 1651 aa25.18■■□□□ 1.62
CD248-201ENST00000311330 NPM1P06748 294 aaKnown RBP eCLIP25.17■■□□□ 1.62
CD248-201ENST00000311330 INO80Q9ULG1 1556 aaPredicted RBP25.15■■□□□ 1.62
CD248-201ENST00000311330 GPRASP1Q5JY77 1395 aa25.15■■□□□ 1.62
CD248-201ENST00000311330 IRX6P78412 446 aaPredicted RBP25.14■■□□□ 1.62
CD248-201ENST00000311330 SENP3-EIF4A1A0A087X0R7 540 aa25.12■■□□□ 1.61
CD248-201ENST00000311330 DEPDC5O75140 1603 aa25.1■■□□□ 1.61
CD248-201ENST00000311330 ZBED9Q6R2W3 1325 aa25.1■■□□□ 1.61
CD248-201ENST00000311330 TESK2Q96S53 571 aa25.09■■□□□ 1.61
CD248-201ENST00000311330 KANK1Q14678 1352 aa25.09■■□□□ 1.61
CD248-201ENST00000311330 PRDM15P57071 1507 aaPredicted RBP25.08■■□□□ 1.61
CD248-201ENST00000311330 DISP3Q9P2K9 1392 aa25.08■■□□□ 1.61
CD248-201ENST00000311330 TRPM2O94759 1503 aa25.07■■□□□ 1.6
CD248-201ENST00000311330 TMC1Q8TDI8 760 aa25.06■■□□□ 1.6
CD248-201ENST00000311330 EIF2AK4Q9P2K8 1649 aaKnown RBP25.06■■□□□ 1.6
CD248-201ENST00000311330 PTPRTO14522 1441 aa25.06■■□□□ 1.6
CD248-201ENST00000311330 CLTCL1P53675 1640 aa25.05■■□□□ 1.6
CD248-201ENST00000311330 SPHKAPQ2M3C7 1700 aa25.05■■□□□ 1.6
CD248-201ENST00000311330 TET3O43151 1660 aa25.04■■□□□ 1.6
CD248-201ENST00000311330 TSHZ2Q9NRE2 1034 aa25.03■■□□□ 1.6
CD248-201ENST00000311330 LAMC1P11047 1609 aa25.03■■□□□ 1.6
CD248-201ENST00000311330 PNISRQ8TF01 805 aaKnown RBP25.03■■□□□ 1.6
CD248-201ENST00000311330 CD109Q6YHK3 1445 aa25.02■■□□□ 1.6
CD248-201ENST00000311330 VWDEQ8N2E2 1590 aa25.02■■□□□ 1.6
CD248-201ENST00000311330 KIDINS220Q9ULH0 1771 aa25.02■■□□□ 1.6
CD248-201ENST00000311330 COL17A1Q9UMD9 1497 aaPredicted RBP25.02■■□□□ 1.6
CD248-201ENST00000311330 MROH1Q8NDA8 1641 aa25.01■■□□□ 1.59
CD248-201ENST00000311330 MADDQ8WXG6 1647 aa24.99■■□□□ 1.59
CD248-201ENST00000311330 MYBBP1AQ9BQG0 1328 aaKnown RBP24.99■■□□□ 1.59
CD248-201ENST00000311330 RALBP1Q15311 655 aa24.99■■□□□ 1.59
CD248-201ENST00000311330 CEP152O94986 1710 aa24.99■■□□□ 1.59
CD248-201ENST00000311330 UGGT1Q9NYU2 1555 aa24.99■■□□□ 1.59
CD248-201ENST00000311330 PER1O15534 1290 aaPredicted RBP24.99■■□□□ 1.59
CD248-201ENST00000311330 ZNF518AQ6AHZ1 1483 aa24.98■■□□□ 1.59
CD248-201ENST00000311330 TMF1P82094 1093 aa24.98■■□□□ 1.59
CD248-201ENST00000311330 RNF17Q9BXT8 1623 aaKnown RBP24.97■■□□□ 1.59
CD248-201ENST00000311330 PANK3Q9H999 370 aa24.96■■□□□ 1.59
CD248-201ENST00000311330 CC2D1BQ5T0F9 858 aaKnown RBP24.95■■□□□ 1.58
CD248-201ENST00000311330 KTN1Q86UP2 1357 aaKnown RBP24.94■■□□□ 1.58
CD248-201ENST00000311330 BRD4O60885 1362 aaPredicted RBP24.93■■□□□ 1.58
CD248-201ENST00000311330 GGT6Q6P531 493 aa24.92■■□□□ 1.58
CD248-201ENST00000311330 POGZQ7Z3K3 1410 aa24.92■■□□□ 1.58
CD248-201ENST00000311330 PARD3Q8TEW0 1356 aa24.9■■□□□ 1.58
CD248-201ENST00000311330 RAPGEF3O95398 923 aa24.9■■□□□ 1.58
CD248-201ENST00000311330 EFCAB6Q5THR3 1501 aa24.89■■□□□ 1.57
CD248-201ENST00000311330 PPRC1Q5VV67 1664 aaKnown RBP24.89■■□□□ 1.57
CD248-201ENST00000311330 ADGRF5Q8IZF2 1346 aa24.87■■□□□ 1.57
CD248-201ENST00000311330 CFAP70Q5T0N1 1121 aa24.87■■□□□ 1.57
CD248-201ENST00000311330 NLRP13Q86W25 1043 aa24.87■■□□□ 1.57
CD248-201ENST00000311330 IQGAP1P46940 1657 aa24.87■■□□□ 1.57
CD248-201ENST00000311330 LRPPRCP42704 1394 aaKnown RBP24.87■■□□□ 1.57
CD248-201ENST00000311330 CHGAP10645 457 aaKnown RBP24.86■■□□□ 1.57
CD248-201ENST00000311330 STAC3Q96MF2 364 aa24.86■■□□□ 1.57
CD248-201ENST00000311330 SCAF11Q99590 1463 aaKnown RBP24.85■■□□□ 1.57
CD248-201ENST00000311330 FRMPD1Q5SYB0 1578 aa24.85■■□□□ 1.57
CD248-201ENST00000311330 SMG6Q86US8 1419 aaKnown RBP24.84■■□□□ 1.57
CD248-201ENST00000311330 CFAP74Q9C0B2 1584 aa24.84■■□□□ 1.57
CD248-201ENST00000311330 CFAP65Q6ZU64 1925 aaKnown RBP24.83■■□□□ 1.57
CD248-201ENST00000311330 MLH3Q9UHC1 1453 aa24.83■■□□□ 1.57
CD248-201ENST00000311330 NUDCQ9Y266 331 aa24.82■■□□□ 1.56
CD248-201ENST00000311330 SALL2Q9Y467 1007 aaPredicted RBP24.82■■□□□ 1.56
CD248-201ENST00000311330 HECW2Q9P2P5 1572 aa24.81■■□□□ 1.56
CD248-201ENST00000311330 CYB5RLQ6IPT4 315 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms