RNA–Protein interactions for RNA: ENST00000309996.6

SPTBN2-201, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN2, Length 7,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-201ENST00000309996 CCDC70Q6NSX1 233 aa15.93■□□□□ 0.14
SPTBN2-201ENST00000309996 PCMTD1Q96MG8 357 aaPredicted RBP15.93■□□□□ 0.14
SPTBN2-201ENST00000309996 KIF16BQ96L93 1317 aa15.93■□□□□ 0.14
SPTBN2-201ENST00000309996 DHX16O60231 1041 aaKnown RBP15.93■□□□□ 0.14
SPTBN2-201ENST00000309996 GGT6Q6P531 493 aa15.93■□□□□ 0.14
SPTBN2-201ENST00000309996 U2AF1L5P0DN76 240 aaPredicted RBP15.92■□□□□ 0.14
SPTBN2-201ENST00000309996 U2AF1Q01081 240 aaKnown RBP eCLIP15.92■□□□□ 0.14
SPTBN2-201ENST00000309996 HMMRO75330 724 aa15.92■□□□□ 0.14
SPTBN2-201ENST00000309996 KIF3AQ9Y496 699 aa15.92■□□□□ 0.14
SPTBN2-201ENST00000309996 CCNB3Q8WWL7 1395 aa15.92■□□□□ 0.14
SPTBN2-201ENST00000309996 NOL8Q76FK4 1167 aaKnown RBP15.92■□□□□ 0.14
SPTBN2-201ENST00000309996 LTV1Q96GA3 475 aaPredicted RBP15.91■□□□□ 0.14
SPTBN2-201ENST00000309996 SLC4A10Q6U841 1118 aa15.91■□□□□ 0.14
SPTBN2-201ENST00000309996 NGDNQ8NEJ9 315 aaKnown RBP15.91■□□□□ 0.14
SPTBN2-201ENST00000309996 SYTL4Q96C24 671 aaPredicted RBP15.91■□□□□ 0.14
SPTBN2-201ENST00000309996 TPM1P09493 284 aa15.9■□□□□ 0.14
SPTBN2-201ENST00000309996 TCERG1O14776 1098 aaKnown RBP15.9■□□□□ 0.14
SPTBN2-201ENST00000309996 RCAN3Q9UKA8 241 aa15.9■□□□□ 0.14
SPTBN2-201ENST00000309996 PPP1R1BQ9UD71 204 aaPredicted RBP15.9■□□□□ 0.14
SPTBN2-201ENST00000309996 RBM19Q9Y4C8 960 aaKnown RBP15.9■□□□□ 0.14
SPTBN2-201ENST00000309996 H3BQV1 296 aa15.89■□□□□ 0.13
SPTBN2-201ENST00000309996 CT47A1Q5JQC4 288 aaPredicted RBP15.89■□□□□ 0.13
SPTBN2-201ENST00000309996 IFFO2Q5TF58 517 aa15.89■□□□□ 0.13
SPTBN2-201ENST00000309996 CCAR2Q8N163 923 aaKnown RBP15.89■□□□□ 0.13
SPTBN2-201ENST00000309996 TMEM132AQ24JP5 1023 aa15.89■□□□□ 0.13
SPTBN2-201ENST00000309996 SYNE3Q6ZMZ3 975 aa15.88■□□□□ 0.13
SPTBN2-201ENST00000309996 ST18O60284 1047 aa15.88■□□□□ 0.13
SPTBN2-201ENST00000309996 AMPHP49418 695 aa15.88■□□□□ 0.13
SPTBN2-201ENST00000309996 EEA1Q15075 1411 aa15.88■□□□□ 0.13
SPTBN2-201ENST00000309996 FOXD4L1Q9NU39 408 aa15.88■□□□□ 0.13
SPTBN2-201ENST00000309996 EIF4G1Q04637 1599 aaKnown RBP15.88■□□□□ 0.13
SPTBN2-201ENST00000309996 SMC4Q9NTJ3 1288 aa15.87■□□□□ 0.13
SPTBN2-201ENST00000309996 GOLGA6L19H0YKK7 550 aa15.86■□□□□ 0.13
SPTBN2-201ENST00000309996 PPM1FP49593 454 aaPredicted RBP15.86■□□□□ 0.13
SPTBN2-201ENST00000309996 GPS2Q13227 327 aa15.86■□□□□ 0.13
SPTBN2-201ENST00000309996 ZFYVE27Q5T4F4 411 aa15.86■□□□□ 0.13
SPTBN2-201ENST00000309996 KIF27Q86VH2 1401 aa15.85■□□□□ 0.13
SPTBN2-201ENST00000309996 FOXD4L5Q5VV16 416 aaPredicted RBP15.84■□□□□ 0.13
SPTBN2-201ENST00000309996 FOXD4L4Q8WXT5 416 aaPredicted RBP15.84■□□□□ 0.13
SPTBN2-201ENST00000309996 ROCK2O75116 1388 aaKnown RBP15.84■□□□□ 0.13
SPTBN2-201ENST00000309996 FOXD1Q16676 465 aa15.83■□□□□ 0.13
SPTBN2-201ENST00000309996 FAM184AQ8NB25 1140 aa15.83■□□□□ 0.12
SPTBN2-201ENST00000309996 CCDC47Q96A33 483 aaKnown RBP15.83■□□□□ 0.12
SPTBN2-201ENST00000309996 C1orf141Q5JVX7 400 aa15.82■□□□□ 0.12
SPTBN2-201ENST00000309996 RBM33Q96EV2 1170 aaKnown RBP15.82■□□□□ 0.12
SPTBN2-201ENST00000309996 SF3B2Q13435 895 aaKnown RBP15.82■□□□□ 0.12
SPTBN2-201ENST00000309996 CCER2I3L3R5 266 aa15.82■□□□□ 0.12
SPTBN2-201ENST00000309996 NGEFQ8N5V2 710 aa15.81■□□□□ 0.12
SPTBN2-201ENST00000309996 APPP05067 770 aa15.81■□□□□ 0.12
SPTBN2-201ENST00000309996 HSP90AA2PQ14568 343 aaPredicted RBP15.8■□□□□ 0.12
SPTBN2-201ENST00000309996 CEP164Q9UPV0 1460 aa15.8■□□□□ 0.12
SPTBN2-201ENST00000309996 TRIM29Q14134 588 aa15.8■□□□□ 0.12
SPTBN2-201ENST00000309996 EIF3AQ14152 1382 aaKnown RBP15.8■□□□□ 0.12
SPTBN2-201ENST00000309996 LRRFIP1Q32MZ4 808 aaKnown RBP15.8■□□□□ 0.12
SPTBN2-201ENST00000309996 CCDC97Q96F63 343 aaPredicted RBP15.8■□□□□ 0.12
SPTBN2-201ENST00000309996 DDX11L8A8MPP1 907 aa15.79■□□□□ 0.12
SPTBN2-201ENST00000309996 EPS15P42566 896 aa15.79■□□□□ 0.12
SPTBN2-201ENST00000309996 BECN2A8MW95 431 aa15.79■□□□□ 0.12
SPTBN2-201ENST00000309996 NUTM2FA1L443 756 aa15.79■□□□□ 0.12
SPTBN2-201ENST00000309996 IPO7O95373 1038 aaKnown RBP15.79■□□□□ 0.12
SPTBN2-201ENST00000309996 CHMP4CQ96CF2 233 aa15.78■□□□□ 0.12
SPTBN2-201ENST00000309996 FHAD1B1AJZ9 1412 aa15.78■□□□□ 0.12
SPTBN2-201ENST00000309996 RALBP1Q15311 655 aa15.78■□□□□ 0.12
SPTBN2-201ENST00000309996 IKQ13123 557 aaPredicted RBP15.77■□□□□ 0.12
SPTBN2-201ENST00000309996 HSP90AB2PQ58FF8 381 aa15.77■□□□□ 0.12
SPTBN2-201ENST00000309996 NAP1L1P55209 391 aaKnown RBP15.77■□□□□ 0.11
SPTBN2-201ENST00000309996 MCTP1Q6DN14 999 aa15.77■□□□□ 0.11
SPTBN2-201ENST00000309996 ANKRD20A12PQ8NF67 263 aa15.77■□□□□ 0.11
SPTBN2-201ENST00000309996 ATP6V1DQ9Y5K8 247 aa15.76■□□□□ 0.11
SPTBN2-201ENST00000309996 LMOD3Q0VAK6 560 aa15.76■□□□□ 0.11
SPTBN2-201ENST00000309996 RILPL2Q969X0 211 aa15.76■□□□□ 0.11
SPTBN2-201ENST00000309996 ZNF771Q7L3S4 317 aaPredicted RBP15.76■□□□□ 0.11
SPTBN2-201ENST00000309996 HSPA5P11021 654 aaKnown RBP15.76■□□□□ 0.11
SPTBN2-201ENST00000309996 IPO9Q96P70 1041 aaKnown RBP15.75■□□□□ 0.11
SPTBN2-201ENST00000309996 ZNF592Q92610 1267 aa15.75■□□□□ 0.11
SPTBN2-201ENST00000309996 RDXP35241 583 aaKnown RBP15.74■□□□□ 0.11
SPTBN2-201ENST00000309996 TTC5Q8N0Z6 440 aa15.74■□□□□ 0.11
SPTBN2-201ENST00000309996 TERF2IPQ9NYB0 399 aa15.74■□□□□ 0.11
SPTBN2-201ENST00000309996 ERICH2A1L162 156 aa15.74■□□□□ 0.11
SPTBN2-201ENST00000309996 SLC4A3P48751 1232 aa15.73■□□□□ 0.11
SPTBN2-201ENST00000309996 FOXD4L6Q3SYB3 417 aaPredicted RBP15.73■□□□□ 0.11
SPTBN2-201ENST00000309996 FOXD4L3Q6VB84 417 aaPredicted RBP15.73■□□□□ 0.11
SPTBN2-201ENST00000309996 CLUAP1Q96AJ1 413 aa15.73■□□□□ 0.11
SPTBN2-201ENST00000309996 CENPJQ9HC77 1338 aaPredicted RBP15.73■□□□□ 0.11
SPTBN2-201ENST00000309996 TEX35Q5T0J7 233 aa15.73■□□□□ 0.11
SPTBN2-201ENST00000309996 HOOK1Q9UJC3 728 aaKnown RBP15.72■□□□□ 0.11
SPTBN2-201ENST00000309996 WRNQ14191 1432 aaPredicted RBP eCLIP15.72■□□□□ 0.119e-6■■■■■ 50.1
SPTBN2-201ENST00000309996 CPLX2Q6PUV4 134 aaKnown RBP15.72■□□□□ 0.11
SPTBN2-201ENST00000309996 WDR70Q9NW82 654 aa15.72■□□□□ 0.11
SPTBN2-201ENST00000309996 AK7Q96M32 723 aa15.72■□□□□ 0.11
SPTBN2-201ENST00000309996 BAZ1BQ9UIG0 1483 aaKnown RBP15.72■□□□□ 0.11
SPTBN2-201ENST00000309996 WASHC2AQ641Q2 1341 aa15.72■□□□□ 0.11
SPTBN2-201ENST00000309996 CCDC146Q8IYE0 955 aa15.71■□□□□ 0.11
SPTBN2-201ENST00000309996 ARHGAP35Q9NRY4 1499 aa15.71■□□□□ 0.11
SPTBN2-201ENST00000309996 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.71■□□□□ 0.11
SPTBN2-201ENST00000309996 RB1CC1Q8TDY2 1594 aa15.7■□□□□ 0.1
SPTBN2-201ENST00000309996 NFXL1Q6ZNB6 911 aa15.7■□□□□ 0.1
SPTBN2-201ENST00000309996 FYB1O15117 783 aa15.7■□□□□ 0.1
SPTBN2-201ENST00000309996 DDX49Q9Y6V7 483 aaKnown RBP15.7■□□□□ 0.1
SPTBN2-201ENST00000309996 PKD2Q13563 968 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms