RNA–Protein interactions for RNA: ENST00000309902.10

ZNF407-202, Transcript of zinc finger protein 407, humanhuman

TSL 2 BASIC

Gene ZNF407, Length 5,595 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF407-202ENST00000309902 CASC1Q6TDU7 716 aa9.42□□□□□ -0.9
ZNF407-202ENST00000309902 FTSJ3Q8IY81 847 aaKnown RBP9.42□□□□□ -0.9
ZNF407-202ENST00000309902 DHX57Q6P158 1386 aaKnown RBP9.42□□□□□ -0.9
ZNF407-202ENST00000309902 LMOD3Q0VAK6 560 aa9.41□□□□□ -0.9
ZNF407-202ENST00000309902 L3MBTL2Q969R5 705 aa9.41□□□□□ -0.9
ZNF407-202ENST00000309902 ROCK1Q13464 1354 aa9.41□□□□□ -0.9
ZNF407-202ENST00000309902 FOXD1Q16676 465 aa9.4□□□□□ -0.9
ZNF407-202ENST00000309902 NGDNQ8NEJ9 315 aaKnown RBP9.4□□□□□ -0.9
ZNF407-202ENST00000309902 CFAP44Q96MT7 982 aa9.4□□□□□ -0.9
ZNF407-202ENST00000309902 NAP1L5Q96NT1 182 aaPredicted RBP9.4□□□□□ -0.9
ZNF407-202ENST00000309902 PPP6R1Q9UPN7 881 aa9.4□□□□□ -0.9
ZNF407-202ENST00000309902 AEBP2Q6ZN18 517 aaPredicted RBP9.4□□□□□ -0.91
ZNF407-202ENST00000309902 SCAPERQ9BY12 1400 aa9.39□□□□□ -0.91
ZNF407-202ENST00000309902 HDAC5Q9UQL6 1122 aa9.39□□□□□ -0.91
ZNF407-202ENST00000309902 CCDC141Q6ZP82 1450 aa9.39□□□□□ -0.91
ZNF407-202ENST00000309902 TEX14Q8IWB6 1497 aa9.39□□□□□ -0.91
ZNF407-202ENST00000309902 PAK3O75914 559 aaPredicted RBP9.39□□□□□ -0.91
ZNF407-202ENST00000309902 TPRNQ4KMQ1 711 aa9.39□□□□□ -0.91
ZNF407-202ENST00000309902 RPGRIP1LQ68CZ1 1315 aa9.39□□□□□ -0.91
ZNF407-202ENST00000309902 SAFB2Q14151 953 aaKnown RBP eCLIP9.39□□□□□ -0.91
ZNF407-202ENST00000309902 PLEKHG5O94827 1062 aa9.39□□□□□ -0.91
ZNF407-202ENST00000309902 CSB-PGBD3P0DP91 1061 aa9.39□□□□□ -0.91
ZNF407-202ENST00000309902 CD109Q6YHK3 1445 aa9.38□□□□□ -0.91
ZNF407-202ENST00000309902 CGNL1Q0VF96 1302 aa9.38□□□□□ -0.91
ZNF407-202ENST00000309902 ADAMTS12P58397 1594 aa9.38□□□□□ -0.91
ZNF407-202ENST00000309902 DAPK1P53355 1430 aa9.37□□□□□ -0.91
ZNF407-202ENST00000309902 SLC52A1Q9NWF4 448 aa9.37□□□□□ -0.91
ZNF407-202ENST00000309902 PCF11O94913 1555 aaKnown RBP9.37□□□□□ -0.91
ZNF407-202ENST00000309902 IPO8O15397 1037 aaKnown RBP9.37□□□□□ -0.91
ZNF407-202ENST00000309902 THEMISQ8N1K5 641 aaPredicted RBP9.36□□□□□ -0.91
ZNF407-202ENST00000309902 NPHP1O15259 732 aa9.36□□□□□ -0.91
ZNF407-202ENST00000309902 ZNF608Q9ULD9 1512 aaPredicted RBP9.36□□□□□ -0.91
ZNF407-202ENST00000309902 TNNT2P45379 298 aaPredicted RBP9.36□□□□□ -0.91
ZNF407-202ENST00000309902 AMER1Q5JTC6 1135 aaPredicted RBP9.35□□□□□ -0.91
ZNF407-202ENST00000309902 CTTNBP2Q8WZ74 1663 aa9.35□□□□□ -0.91
ZNF407-202ENST00000309902 MSH5O43196 834 aa9.35□□□□□ -0.91
ZNF407-202ENST00000309902 NGEFQ8N5V2 710 aa9.35□□□□□ -0.91
ZNF407-202ENST00000309902 AKNAQ7Z591 1439 aa9.34□□□□□ -0.91
ZNF407-202ENST00000309902 KIF21AQ7Z4S6 1674 aa9.34□□□□□ -0.91
ZNF407-202ENST00000309902 RAPGEF6Q8TEU7 1601 aa9.34□□□□□ -0.91
ZNF407-202ENST00000309902 COG3Q96JB2 828 aa9.34□□□□□ -0.91
ZNF407-202ENST00000309902 KIAA1107Q9UPP5 1409 aa9.34□□□□□ -0.91
ZNF407-202ENST00000309902 UGGT2Q9NYU1 1516 aa9.34□□□□□ -0.91
ZNF407-202ENST00000309902 ADGRL1O94910 1474 aa9.33□□□□□ -0.92
ZNF407-202ENST00000309902 DDRGK1Q96HY6 314 aa9.33□□□□□ -0.92
ZNF407-202ENST00000309902 USP47Q96K76 1375 aa9.33□□□□□ -0.92
ZNF407-202ENST00000309902 AMPHP49418 695 aa9.33□□□□□ -0.92
ZNF407-202ENST00000309902 NLRP13Q86W25 1043 aa9.33□□□□□ -0.92
ZNF407-202ENST00000309902 TRAK1Q9UPV9 953 aa9.33□□□□□ -0.92
ZNF407-202ENST00000309902 CDK13Q14004 1512 aaKnown RBP9.33□□□□□ -0.92
ZNF407-202ENST00000309902 DENND4BO75064 1496 aaPredicted RBP9.33□□□□□ -0.92
ZNF407-202ENST00000309902 CAMSAP2Q08AD1 1489 aa9.33□□□□□ -0.92
ZNF407-202ENST00000309902 ZNF644Q9H582 1327 aaPredicted RBP9.32□□□□□ -0.92
ZNF407-202ENST00000309902 TRIM44Q96DX7 344 aaPredicted RBP9.32□□□□□ -0.92
ZNF407-202ENST00000309902 ITSN2Q9NZM3 1697 aa9.32□□□□□ -0.92
ZNF407-202ENST00000309902 CENPJQ9HC77 1338 aaPredicted RBP9.32□□□□□ -0.92
ZNF407-202ENST00000309902 BECN1Q14457 450 aa9.32□□□□□ -0.92
ZNF407-202ENST00000309902 PDE3BQ13370 1112 aa9.32□□□□□ -0.92
ZNF407-202ENST00000309902 NEUROD2Q15784 382 aa9.32□□□□□ -0.92
ZNF407-202ENST00000309902 ATF3P18847 181 aa9.31□□□□□ -0.92
ZNF407-202ENST00000309902 NCLP19338 710 aaKnown RBP9.31□□□□□ -0.92
ZNF407-202ENST00000309902 AFAP1Q8N556 730 aa9.31□□□□□ -0.92
ZNF407-202ENST00000309902 ARID3AQ99856 593 aa9.31□□□□□ -0.92
ZNF407-202ENST00000309902 U2AF1L5P0DN76 240 aaPredicted RBP9.31□□□□□ -0.92
ZNF407-202ENST00000309902 U2AF1Q01081 240 aaKnown RBP eCLIP9.31□□□□□ -0.92
ZNF407-202ENST00000309902 PPP4R2Q9NY27 417 aa9.31□□□□□ -0.92
ZNF407-202ENST00000309902 EIF4G3O43432 1585 aaKnown RBP9.31□□□□□ -0.92
ZNF407-202ENST00000309902 SPRYD3Q8NCJ5 442 aa9.31□□□□□ -0.92
ZNF407-202ENST00000309902 ANKRD30BQ9BXX2 1392 aa9.31□□□□□ -0.92
ZNF407-202ENST00000309902 MYBBP1AQ9BQG0 1328 aaKnown RBP9.31□□□□□ -0.92
ZNF407-202ENST00000309902 RGS3P49796 1198 aa9.31□□□□□ -0.92
ZNF407-202ENST00000309902 PTPN23Q9H3S7 1636 aa9.31□□□□□ -0.92
ZNF407-202ENST00000309902 ERICH6BQ5W0A0 696 aa9.3□□□□□ -0.92
ZNF407-202ENST00000309902 TMX4Q9H1E5 349 aaPredicted RBP9.29□□□□□ -0.92
ZNF407-202ENST00000309902 ARHGEF11O15085 1522 aa9.29□□□□□ -0.92
ZNF407-202ENST00000309902 OS9Q13438 667 aaPredicted RBP9.29□□□□□ -0.92
ZNF407-202ENST00000309902 PSME1Q06323 249 aa9.29□□□□□ -0.92
ZNF407-202ENST00000309902 PBRM1Q86U86 1689 aa9.29□□□□□ -0.92
ZNF407-202ENST00000309902 NUTM2DQ5VT03 806 aaPredicted RBP9.29□□□□□ -0.92
ZNF407-202ENST00000309902 STK31Q9BXU1 1019 aa9.29□□□□□ -0.92
ZNF407-202ENST00000309902 KIAA0556O60303 1618 aa9.28□□□□□ -0.92
ZNF407-202ENST00000309902 SOX12O15370 315 aa9.28□□□□□ -0.92
ZNF407-202ENST00000309902 CCDC9Q9Y3X0 531 aaKnown RBP9.28□□□□□ -0.92
ZNF407-202ENST00000309902 FANCAO15360 1455 aa9.28□□□□□ -0.92
ZNF407-202ENST00000309902 GOLGA2Q08379 1002 aa9.27□□□□□ -0.92
ZNF407-202ENST00000309902 ANKLE2Q86XL3 938 aa9.27□□□□□ -0.92
ZNF407-202ENST00000309902 GPRASP1Q5JY77 1395 aa9.27□□□□□ -0.92
ZNF407-202ENST00000309902 ST20-MTHFSA0A0A6YYL1 179 aa9.27□□□□□ -0.93
ZNF407-202ENST00000309902 HMGB2P26583 209 aaKnown RBP9.27□□□□□ -0.93
ZNF407-202ENST00000309902 WDR7Q9Y4E6 1490 aa9.27□□□□□ -0.93
ZNF407-202ENST00000309902 TXNDC2Q86VQ3 553 aa9.26□□□□□ -0.93
ZNF407-202ENST00000309902 IL27Q8NEV9 243 aa9.26□□□□□ -0.93
ZNF407-202ENST00000309902 C1orf141Q5JVX7 400 aa9.26□□□□□ -0.93
ZNF407-202ENST00000309902 NUP160Q12769 1436 aa9.26□□□□□ -0.93
ZNF407-202ENST00000309902 EVA1CP58658 441 aa9.25□□□□□ -0.93
ZNF407-202ENST00000309902 FRAT1Q92837 279 aaPredicted RBP9.25□□□□□ -0.93
ZNF407-202ENST00000309902 MINK1Q8N4C8 1332 aaPredicted RBP9.25□□□□□ -0.93
ZNF407-202ENST00000309902 PLCH2O75038 1416 aa9.25□□□□□ -0.93
ZNF407-202ENST00000309902 PANK3Q9H999 370 aa9.24□□□□□ -0.93
ZNF407-202ENST00000309902 ABCA5Q8WWZ7 1642 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms