RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 CCDC144AA2RUR9 1427 aa15.73■□□□□ 0.11
TRIM59-201ENST00000309784 ZFYVE16Q7Z3T8 1539 aa15.73■□□□□ 0.11
TRIM59-201ENST00000309784 CFAP74Q9C0B2 1584 aa15.73■□□□□ 0.11
TRIM59-201ENST00000309784 FAM135AQ9P2D6 1515 aa15.72■□□□□ 0.11
TRIM59-201ENST00000309784 POLR3GLQ9BT43 218 aa15.72■□□□□ 0.11
TRIM59-201ENST00000309784 ESF1Q9H501 851 aaKnown RBP15.71■□□□□ 0.11
TRIM59-201ENST00000309784 PLXNC1O60486 1568 aa15.71■□□□□ 0.11
TRIM59-201ENST00000309784 TEX14Q8IWB6 1497 aa15.7■□□□□ 0.1
TRIM59-201ENST00000309784 A2MP01023 1474 aa15.7■□□□□ 0.1
TRIM59-201ENST00000309784 DIP2BQ9P265 1576 aa15.68■□□□□ 0.1
TRIM59-201ENST00000309784 RPRD2Q5VT52 1461 aaKnown RBP15.68■□□□□ 0.1
TRIM59-201ENST00000309784 PLPPR3Q6T4P5 718 aa15.68■□□□□ 0.1
TRIM59-201ENST00000309784 EIF4G2P78344 907 aaKnown RBP eCLIP15.67■□□□□ 0.1
TRIM59-201ENST00000309784 DDX10Q13206 875 aaKnown RBP15.66■□□□□ 0.1
TRIM59-201ENST00000309784 YEATS2Q9ULM3 1422 aa15.65■□□□□ 0.1
TRIM59-201ENST00000309784 NBPF8Q3BBV2 869 aa15.64■□□□□ 0.09
TRIM59-201ENST00000309784 SENP3Q9H4L4 574 aaPredicted RBP15.64■□□□□ 0.09
TRIM59-201ENST00000309784 GLI2P10070 1586 aa15.63■□□□□ 0.09
TRIM59-201ENST00000309784 HECW2Q9P2P5 1572 aa15.63■□□□□ 0.09
TRIM59-201ENST00000309784 MLH3Q9UHC1 1453 aa15.63■□□□□ 0.09
TRIM59-201ENST00000309784 INO80Q9ULG1 1556 aaPredicted RBP15.63■□□□□ 0.09
TRIM59-201ENST00000309784 MAP3K4Q9Y6R4 1608 aa15.63■□□□□ 0.09
TRIM59-201ENST00000309784 HSPA5P11021 654 aaKnown RBP15.62■□□□□ 0.09
TRIM59-201ENST00000309784 CARD11Q9BXL7 1154 aa15.62■□□□□ 0.09
TRIM59-201ENST00000309784 STAG3Q9UJ98 1225 aa15.61■□□□□ 0.09
TRIM59-201ENST00000309784 KIDINS220Q9ULH0 1771 aa15.61■□□□□ 0.09
TRIM59-201ENST00000309784 DNAJC5Q9H3Z4 198 aa15.6■□□□□ 0.09
TRIM59-201ENST00000309784 KDM5DQ9BY66 1539 aa15.6■□□□□ 0.09
TRIM59-201ENST00000309784 CNGB1Q14028 1251 aaPredicted RBP15.59■□□□□ 0.09
TRIM59-201ENST00000309784 UNC13BO14795 1591 aa15.58■□□□□ 0.09
TRIM59-201ENST00000309784 YTHDC1Q96MU7 727 aaKnown RBP15.58■□□□□ 0.08
TRIM59-201ENST00000309784 KDM5CP41229 1560 aa15.57■□□□□ 0.08
TRIM59-201ENST00000309784 MIER1Q8N108 512 aa15.57■□□□□ 0.08
TRIM59-201ENST00000309784 CFAP65Q6ZU64 1925 aaKnown RBP15.56■□□□□ 0.08
TRIM59-201ENST00000309784 IQGAP3Q86VI3 1631 aa15.55■□□□□ 0.08
TRIM59-201ENST00000309784 ROCK2O75116 1388 aaKnown RBP15.55■□□□□ 0.08
TRIM59-201ENST00000309784 NUTM2DQ5VT03 806 aaPredicted RBP15.54■□□□□ 0.08
TRIM59-201ENST00000309784 ABCA6Q8N139 1617 aa15.54■□□□□ 0.08
TRIM59-201ENST00000309784 ATP10AO60312 1499 aa15.52■□□□□ 0.08
TRIM59-201ENST00000309784 PLA2R1Q13018 1463 aa15.52■□□□□ 0.07
TRIM59-201ENST00000309784 DIP2CQ9Y2E4 1556 aa15.51■□□□□ 0.07
TRIM59-201ENST00000309784 MAGI2Q86UL8 1455 aa15.51■□□□□ 0.07
TRIM59-201ENST00000309784 COL17A1Q9UMD9 1497 aaPredicted RBP15.5■□□□□ 0.07
TRIM59-201ENST00000309784 RICTORQ6R327 1708 aa15.5■□□□□ 0.07
TRIM59-201ENST00000309784 FBXO31Q5XUX0 539 aaPredicted RBP15.49■□□□□ 0.07
TRIM59-201ENST00000309784 KIF13AQ9H1H9 1805 aa15.49■□□□□ 0.07
TRIM59-201ENST00000309784 NBPF1Q3BBV0 1214 aa15.49■□□□□ 0.07
TRIM59-201ENST00000309784 USP47Q96K76 1375 aa15.48■□□□□ 0.07
TRIM59-201ENST00000309784 EIF2AK4Q9P2K8 1649 aaKnown RBP15.48■□□□□ 0.07
TRIM59-201ENST00000309784 FRMPD1Q5SYB0 1578 aa15.47■□□□□ 0.07
TRIM59-201ENST00000309784 PRDM15P57071 1507 aaPredicted RBP15.47■□□□□ 0.07
TRIM59-201ENST00000309784 ANP32CO43423 234 aa15.47■□□□□ 0.07
TRIM59-201ENST00000309784 BCANQ96GW7 911 aa15.46■□□□□ 0.07
TRIM59-201ENST00000309784 NPATQ14207 1427 aa15.46■□□□□ 0.07
TRIM59-201ENST00000309784 ST20-MTHFSA0A0A6YYL1 179 aa15.46■□□□□ 0.07
TRIM59-201ENST00000309784 E9PCH4 1651 aa15.46■□□□□ 0.07
TRIM59-201ENST00000309784 TET3O43151 1660 aa15.46■□□□□ 0.07
TRIM59-201ENST00000309784 CEP152O94986 1710 aa15.45■□□□□ 0.06
TRIM59-201ENST00000309784 UGGT1Q9NYU2 1555 aa15.45■□□□□ 0.06
TRIM59-201ENST00000309784 PPRC1Q5VV67 1664 aaKnown RBP15.45■□□□□ 0.06
TRIM59-201ENST00000309784 IDI1Q13907 227 aa15.43■□□□□ 0.06
TRIM59-201ENST00000309784 DEPDC5O75140 1603 aa15.43■□□□□ 0.06
TRIM59-201ENST00000309784 EFCAB6Q5THR3 1501 aa15.42■□□□□ 0.06
TRIM59-201ENST00000309784 ABCC3O15438 1527 aa15.42■□□□□ 0.06
TRIM59-201ENST00000309784 MROH1Q8NDA8 1641 aa15.41■□□□□ 0.06
TRIM59-201ENST00000309784 CFAP70Q5T0N1 1121 aa15.41■□□□□ 0.06
TRIM59-201ENST00000309784 TRPM2O94759 1503 aa15.41■□□□□ 0.06
TRIM59-201ENST00000309784 PTPRTO14522 1441 aa15.41■□□□□ 0.06
TRIM59-201ENST00000309784 WASHC2AQ641Q2 1341 aa15.4■□□□□ 0.06
TRIM59-201ENST00000309784 ZMYM4Q5VZL5 1548 aa15.4■□□□□ 0.06
TRIM59-201ENST00000309784 SLC52A1Q9NWF4 448 aa15.4■□□□□ 0.06
TRIM59-201ENST00000309784 SPHKAPQ2M3C7 1700 aa15.39■□□□□ 0.05
TRIM59-201ENST00000309784 PRAG1Q86YV5 1406 aa15.39■□□□□ 0.05
TRIM59-201ENST00000309784 ADGRF5Q8IZF2 1346 aa15.39■□□□□ 0.05
TRIM59-201ENST00000309784 C11orf95C9JLR9 678 aaPredicted RBP15.38■□□□□ 0.05
TRIM59-201ENST00000309784 CEBPAP49715 358 aaPredicted RBP15.38■□□□□ 0.05
TRIM59-201ENST00000309784 PPP6R1Q9UPN7 881 aa15.38■□□□□ 0.05
TRIM59-201ENST00000309784 RNF17Q9BXT8 1623 aaKnown RBP15.38■□□□□ 0.05
TRIM59-201ENST00000309784 VWDEQ8N2E2 1590 aa15.38■□□□□ 0.05
TRIM59-201ENST00000309784 CNTLNQ9NXG0 1405 aa15.38■□□□□ 0.05
TRIM59-201ENST00000309784 CLTCL1P53675 1640 aa15.38■□□□□ 0.05
TRIM59-201ENST00000309784 VGFO15240 615 aaPredicted RBP15.37■□□□□ 0.05
TRIM59-201ENST00000309784 SPATA31E1Q6ZUB1 1445 aa15.37■□□□□ 0.05
TRIM59-201ENST00000309784 STAC3Q96MF2 364 aa15.37■□□□□ 0.05
TRIM59-201ENST00000309784 RALGAPBQ86X10 1494 aa15.36■□□□□ 0.05
TRIM59-201ENST00000309784 KIF7Q2M1P5 1343 aa15.36■□□□□ 0.05
TRIM59-201ENST00000309784 UHRF1BP1Q6BDS2 1440 aa15.36■□□□□ 0.05
TRIM59-201ENST00000309784 NOS1P29475 1434 aa15.36■□□□□ 0.05
TRIM59-201ENST00000309784 LMTK2Q8IWU2 1503 aa15.35■□□□□ 0.05
TRIM59-201ENST00000309784 TMEM132EQ6IEE7 984 aa15.35■□□□□ 0.05
TRIM59-201ENST00000309784 STK26Q9P289 416 aa15.35■□□□□ 0.05
TRIM59-201ENST00000309784 TRAK1Q9UPV9 953 aa15.35■□□□□ 0.05
TRIM59-201ENST00000309784 CCDC7Q96M83 1385 aa15.35■□□□□ 0.05
TRIM59-201ENST00000309784 ARHGEF40Q8TER5 1519 aa15.34■□□□□ 0.05
TRIM59-201ENST00000309784 ZMYM3Q14202 1370 aa15.33■□□□□ 0.05
TRIM59-201ENST00000309784 CENPBP07199 599 aaPredicted RBP15.33■□□□□ 0.05
TRIM59-201ENST00000309784 CAMSAP1Q5T5Y3 1602 aa15.33■□□□□ 0.04
TRIM59-201ENST00000309784 TMF1P82094 1093 aa15.33■□□□□ 0.04
TRIM59-201ENST00000309784 SAFB2Q14151 953 aaKnown RBP eCLIP15.33■□□□□ 0.04
TRIM59-201ENST00000309784 KIF1BO60333 1816 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms