RNA–Protein interactions for RNA: ENST00000308769.12

RFWD2-201, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

TSL 1 (best) BASIC

Gene RFWD2, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-201ENST00000308769 CCDC144AA2RUR9 1427 aa33.75■■■□□ 2.99
RFWD2-201ENST00000308769 ATP7AQ04656 1500 aa33.75■■■□□ 2.99
RFWD2-201ENST00000308769 SCAPERQ9BY12 1400 aa33.72■■■□□ 2.99
RFWD2-201ENST00000308769 CCDC7Q96M83 1385 aa33.72■■■□□ 2.99
RFWD2-201ENST00000308769 RALGAPBQ86X10 1494 aa33.7■■■□□ 2.99
RFWD2-201ENST00000308769 KDM5CP41229 1560 aa33.69■■■□□ 2.98
RFWD2-201ENST00000308769 CCER2I3L3R5 266 aa33.68■■■□□ 2.98
RFWD2-201ENST00000308769 DCAF11Q8TEB1 546 aa33.67■■■□□ 2.98
RFWD2-201ENST00000308769 KDM2AQ9Y2K7 1162 aa33.67■■■□□ 2.98
RFWD2-201ENST00000308769 USP47Q96K76 1375 aa33.67■■■□□ 2.98
RFWD2-201ENST00000308769 CNTLNQ9NXG0 1405 aa33.66■■■□□ 2.98
RFWD2-201ENST00000308769 DEPDC5O75140 1603 aa33.66■■■□□ 2.98
RFWD2-201ENST00000308769 BCORL1Q5H9F3 1711 aa33.63■■■□□ 2.97
RFWD2-201ENST00000308769 E9PCH4 1651 aa33.62■■■□□ 2.97
RFWD2-201ENST00000308769 KIF7Q2M1P5 1343 aa33.61■■■□□ 2.97
RFWD2-201ENST00000308769 ATP10AO60312 1499 aa33.61■■■□□ 2.97
RFWD2-201ENST00000308769 KIDINS220Q9ULH0 1771 aa33.59■■■□□ 2.97
RFWD2-201ENST00000308769 MYT1LQ9UL68 1186 aa33.58■■■□□ 2.97
RFWD2-201ENST00000308769 CD109Q6YHK3 1445 aa33.58■■■□□ 2.97
RFWD2-201ENST00000308769 CFAP74Q9C0B2 1584 aa33.56■■■□□ 2.96
RFWD2-201ENST00000308769 RGL3Q3MIN7 710 aa33.56■■■□□ 2.96
RFWD2-201ENST00000308769 A2MP01023 1474 aa33.56■■■□□ 2.96
RFWD2-201ENST00000308769 TRPM1Q7Z4N2 1603 aa33.55■■■□□ 2.96
RFWD2-201ENST00000308769 EIF2AK4Q9P2K8 1649 aaKnown RBP33.54■■■□□ 2.96
RFWD2-201ENST00000308769 CARD11Q9BXL7 1154 aa33.54■■■□□ 2.96
RFWD2-201ENST00000308769 ZNF518AQ6AHZ1 1483 aa33.54■■■□□ 2.96
RFWD2-201ENST00000308769 PRAG1Q86YV5 1406 aa33.53■■■□□ 2.96
RFWD2-201ENST00000308769 TET3O43151 1660 aa33.51■■■□□ 2.96
RFWD2-201ENST00000308769 SPHKAPQ2M3C7 1700 aa33.5■■■□□ 2.95
RFWD2-201ENST00000308769 VWDEQ8N2E2 1590 aa33.49■■■□□ 2.95
RFWD2-201ENST00000308769 DHX29Q7Z478 1369 aaKnown RBP33.49■■■□□ 2.95
RFWD2-201ENST00000308769 MROH1Q8NDA8 1641 aa33.49■■■□□ 2.95
RFWD2-201ENST00000308769 KIF3BO15066 747 aa33.47■■■□□ 2.95
RFWD2-201ENST00000308769 ROCK2O75116 1388 aaKnown RBP33.47■■■□□ 2.95
RFWD2-201ENST00000308769 PRDM15P57071 1507 aaPredicted RBP33.47■■■□□ 2.95
RFWD2-201ENST00000308769 TRPM2O94759 1503 aa33.45■■■□□ 2.95
RFWD2-201ENST00000308769 POGZQ7Z3K3 1410 aa33.45■■■□□ 2.94
RFWD2-201ENST00000308769 KANK1Q14678 1352 aa33.43■■■□□ 2.94
RFWD2-201ENST00000308769 CEP152O94986 1710 aa33.42■■■□□ 2.94
RFWD2-201ENST00000308769 CLTCL1P53675 1640 aa33.39■■■□□ 2.94
RFWD2-201ENST00000308769 PTPRTO14522 1441 aa33.39■■■□□ 2.94
RFWD2-201ENST00000308769 HECW2Q9P2P5 1572 aa33.38■■■□□ 2.93
RFWD2-201ENST00000308769 ST20-MTHFSA0A0A6YYL1 179 aa33.38■■■□□ 2.93
RFWD2-201ENST00000308769 POLR3GLQ9BT43 218 aa33.37■■■□□ 2.93
RFWD2-201ENST00000308769 RIMBP3CA6NJZ7 1639 aa33.35■■■□□ 2.93
RFWD2-201ENST00000308769 RIMBP3BA6NNM3 1639 aa33.35■■■□□ 2.93
RFWD2-201ENST00000308769 PRKRIP1Q9H875 184 aaPredicted RBP33.35■■■□□ 2.93
RFWD2-201ENST00000308769 RIMBP3Q9UFD9 1639 aa33.35■■■□□ 2.93
RFWD2-201ENST00000308769 ARID4BQ4LE39 1312 aaPredicted RBP33.34■■■□□ 2.93
RFWD2-201ENST00000308769 NBPF1Q3BBV0 1214 aa33.34■■■□□ 2.93
RFWD2-201ENST00000308769 CYB5RLQ6IPT4 315 aa33.34■■■□□ 2.93
RFWD2-201ENST00000308769 LAMC1P11047 1609 aa33.34■■■□□ 2.93
RFWD2-201ENST00000308769 MLH3Q9UHC1 1453 aa33.33■■■□□ 2.93
RFWD2-201ENST00000308769 GPRASP1Q5JY77 1395 aa33.32■■■□□ 2.92
RFWD2-201ENST00000308769 NEO1Q92859 1461 aa33.32■■■□□ 2.92
RFWD2-201ENST00000308769 RNF17Q9BXT8 1623 aaKnown RBP33.32■■■□□ 2.92
RFWD2-201ENST00000308769 FRMPD1Q5SYB0 1578 aa33.32■■■□□ 2.92
RFWD2-201ENST00000308769 MAP3K4Q9Y6R4 1608 aa33.31■■■□□ 2.92
RFWD2-201ENST00000308769 ABCA6Q8N139 1617 aa33.3■■■□□ 2.92
RFWD2-201ENST00000308769 EFCAB6Q5THR3 1501 aa33.29■■■□□ 2.92
RFWD2-201ENST00000308769 PPRC1Q5VV67 1664 aaKnown RBP33.29■■■□□ 2.92
RFWD2-201ENST00000308769 MADDQ8WXG6 1647 aa33.27■■■□□ 2.92
RFWD2-201ENST00000308769 CCDC184Q52MB2 194 aa33.25■■■□□ 2.91
RFWD2-201ENST00000308769 UGGT1Q9NYU2 1555 aa33.22■■■□□ 2.91
RFWD2-201ENST00000308769 RAPGEF3O95398 923 aa33.22■■■□□ 2.91
RFWD2-201ENST00000308769 LMTK2Q8IWU2 1503 aa33.22■■■□□ 2.91
RFWD2-201ENST00000308769 RICTORQ6R327 1708 aa33.21■■■□□ 2.91
RFWD2-201ENST00000308769 GLI2P10070 1586 aa33.17■■■□□ 2.9
RFWD2-201ENST00000308769 KIF1BO60333 1816 aa33.17■■■□□ 2.9
RFWD2-201ENST00000308769 CFAP65Q6ZU64 1925 aaKnown RBP33.15■■■□□ 2.9
RFWD2-201ENST00000308769 DIP2CQ9Y2E4 1556 aa33.15■■■□□ 2.9
RFWD2-201ENST00000308769 NEURL4Q96JN8 1562 aa33.14■■■□□ 2.9
RFWD2-201ENST00000308769 GGT6Q6P531 493 aa33.12■■■□□ 2.89
RFWD2-201ENST00000308769 MRS2Q9HD23 443 aa33.12■■■□□ 2.89
RFWD2-201ENST00000308769 MROH2AA6NES4 1674 aa33.12■■■□□ 2.89
RFWD2-201ENST00000308769 CNGB1Q14028 1251 aaPredicted RBP33.11■■■□□ 2.89
RFWD2-201ENST00000308769 HNRNPUQ00839 825 aaKnown RBP eCLIP33.1■■■□□ 2.89
RFWD2-201ENST00000308769 IQGAP1P46940 1657 aa33.1■■■□□ 2.89
RFWD2-201ENST00000308769 COL17A1Q9UMD9 1497 aaPredicted RBP33.09■■■□□ 2.89
RFWD2-201ENST00000308769 DIP2BQ9P265 1576 aa33.09■■■□□ 2.89
RFWD2-201ENST00000308769 TESK2Q96S53 571 aa33.08■■■□□ 2.89
RFWD2-201ENST00000308769 NPATQ14207 1427 aa33.07■■■□□ 2.88
RFWD2-201ENST00000308769 IFT172Q9UG01 1749 aa33.07■■■□□ 2.88
RFWD2-201ENST00000308769 ABCC3O15438 1527 aa33.05■■■□□ 2.88
RFWD2-201ENST00000308769 STAC3Q96MF2 364 aa33.05■■■□□ 2.88
RFWD2-201ENST00000308769 DISP3Q9P2K9 1392 aa33.05■■■□□ 2.88
RFWD2-201ENST00000308769 TSPOAP1O95153 1857 aa33.04■■■□□ 2.88
RFWD2-201ENST00000308769 CAMSAP1Q5T5Y3 1602 aa33.02■■■□□ 2.88
RFWD2-201ENST00000308769 FAM9BQ8IZU0 186 aa33.02■■■□□ 2.88
RFWD2-201ENST00000308769 SUPT16HQ9Y5B9 1047 aaKnown RBP33.02■■■□□ 2.88
RFWD2-201ENST00000308769 KIAA1210Q9ULL0 1709 aa33.02■■■□□ 2.88
RFWD2-201ENST00000308769 FAM69CQ0P6D2 419 aa33.01■■■□□ 2.88
RFWD2-201ENST00000308769 YEATS2Q9ULM3 1422 aa33.01■■■□□ 2.87
RFWD2-201ENST00000308769 WASHC2CQ9Y4E1 1318 aa33■■■□□ 2.87
RFWD2-201ENST00000308769 MYOM2P54296 1465 aa32.99■■■□□ 2.87
RFWD2-201ENST00000308769 ADGRB3O60242 1522 aa32.98■■■□□ 2.87
RFWD2-201ENST00000308769 SIGLEC1Q9BZZ2 1709 aa32.97■■■□□ 2.87
RFWD2-201ENST00000308769 SCAF11Q99590 1463 aaKnown RBP32.94■■■□□ 2.86
RFWD2-201ENST00000308769 TMF1P82094 1093 aa32.93■■■□□ 2.86
RFWD2-201ENST00000308769 ADGRF5Q8IZF2 1346 aa32.92■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms