RNA–Protein interactions for RNA: ENST00000308249.3

PPM1E-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPM1E, Length 6,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1E-201ENST00000308249 RCAN3Q9UKA8 241 aa19.55■□□□□ 0.72
PPM1E-201ENST00000308249 ST18O60284 1047 aa19.54■□□□□ 0.72
PPM1E-201ENST00000308249 SAMD1Q6SPF0 538 aaPredicted RBP19.54■□□□□ 0.72
PPM1E-201ENST00000308249 RILPL2Q969X0 211 aa19.54■□□□□ 0.72
PPM1E-201ENST00000308249 BCL11BQ9C0K0 894 aaPredicted RBP19.54■□□□□ 0.72
PPM1E-201ENST00000308249 DHX16O60231 1041 aaKnown RBP19.53■□□□□ 0.72
PPM1E-201ENST00000308249 CWC22Q9HCG8 908 aaKnown RBP19.52■□□□□ 0.72
PPM1E-201ENST00000308249 IPO7O95373 1038 aaKnown RBP19.52■□□□□ 0.71
PPM1E-201ENST00000308249 NAP1L1P55209 391 aaKnown RBP19.51■□□□□ 0.71
PPM1E-201ENST00000308249 GGT6Q6P531 493 aa19.51■□□□□ 0.71
PPM1E-201ENST00000308249 FBXW7Q969H0 707 aa19.51■□□□□ 0.71
PPM1E-201ENST00000308249 KANK1Q14678 1352 aa19.51■□□□□ 0.71
PPM1E-201ENST00000308249 SYNE3Q6ZMZ3 975 aa19.5■□□□□ 0.71
PPM1E-201ENST00000308249 DCAF1Q9Y4B6 1507 aa19.49■□□□□ 0.71
PPM1E-201ENST00000308249 HOMER1Q86YM7 354 aa19.49■□□□□ 0.71
PPM1E-201ENST00000308249 CT47A1Q5JQC4 288 aaPredicted RBP19.49■□□□□ 0.71
PPM1E-201ENST00000308249 HDAC5Q9UQL6 1122 aa19.49■□□□□ 0.71
PPM1E-201ENST00000308249 KTN1Q86UP2 1357 aaKnown RBP19.48■□□□□ 0.71
PPM1E-201ENST00000308249 CCDC146Q8IYE0 955 aa19.48■□□□□ 0.71
PPM1E-201ENST00000308249 DDX49Q9Y6V7 483 aaKnown RBP19.48■□□□□ 0.71
PPM1E-201ENST00000308249 ODF2Q5BJF6 829 aa19.47■□□□□ 0.71
PPM1E-201ENST00000308249 RUFY1Q96T51 708 aa19.47■□□□□ 0.71
PPM1E-201ENST00000308249 ZFYVE27Q5T4F4 411 aa19.47■□□□□ 0.71
PPM1E-201ENST00000308249 CCDC43Q96MW1 224 aaKnown RBP19.46■□□□□ 0.71
PPM1E-201ENST00000308249 TEX35Q5T0J7 233 aa19.46■□□□□ 0.71
PPM1E-201ENST00000308249 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.46■□□□□ 0.71
PPM1E-201ENST00000308249 MAP7D2Q96T17 732 aa19.45■□□□□ 0.7
PPM1E-201ENST00000308249 NOL10Q9BSC4 688 aaKnown RBP19.45■□□□□ 0.7
PPM1E-201ENST00000308249 NGEFQ8N5V2 710 aa19.45■□□□□ 0.7
PPM1E-201ENST00000308249 CCDC47Q96A33 483 aaKnown RBP19.44■□□□□ 0.7
PPM1E-201ENST00000308249 CHMP4AQ9BY43 222 aa19.44■□□□□ 0.7
PPM1E-201ENST00000308249 SKIDA1Q1XH10 827 aa19.44■□□□□ 0.7
PPM1E-201ENST00000308249 TRIM29Q14134 588 aa19.44■□□□□ 0.7
PPM1E-201ENST00000308249 AMOTL1Q8IY63 956 aa19.43■□□□□ 0.7
PPM1E-201ENST00000308249 ANKRD20A12PQ8NF67 263 aa19.43■□□□□ 0.7
PPM1E-201ENST00000308249 PLCD4Q9BRC7 762 aa19.43■□□□□ 0.7
PPM1E-201ENST00000308249 NUTM2FA1L443 756 aa19.43■□□□□ 0.7
PPM1E-201ENST00000308249 PAF1Q8N7H5 531 aa19.42■□□□□ 0.7
PPM1E-201ENST00000308249 KLHL34Q8N239 644 aa19.42■□□□□ 0.7
PPM1E-201ENST00000308249 APPP05067 770 aa19.42■□□□□ 0.7
PPM1E-201ENST00000308249 AMPHP49418 695 aa19.42■□□□□ 0.7
PPM1E-201ENST00000308249 DDX11L8A8MPP1 907 aa19.41■□□□□ 0.7
PPM1E-201ENST00000308249 FOSBP53539 338 aa19.41■□□□□ 0.7
PPM1E-201ENST00000308249 IPO9Q96P70 1041 aaKnown RBP19.41■□□□□ 0.7
PPM1E-201ENST00000308249 AK7Q96M32 723 aa19.41■□□□□ 0.7
PPM1E-201ENST00000308249 FAM13BQ9NYF5 915 aa19.41■□□□□ 0.7
PPM1E-201ENST00000308249 SLC4A3P48751 1232 aa19.41■□□□□ 0.7
PPM1E-201ENST00000308249 HSP90AB2PQ58FF8 381 aa19.4■□□□□ 0.7
PPM1E-201ENST00000308249 NGDNQ8NEJ9 315 aaKnown RBP19.4■□□□□ 0.7
PPM1E-201ENST00000308249 HSPA5P11021 654 aaKnown RBP19.39■□□□□ 0.69
PPM1E-201ENST00000308249 CDR1P51861 262 aa19.39■□□□□ 0.69
PPM1E-201ENST00000308249 NUTM2DQ5VT03 806 aaPredicted RBP19.37■□□□□ 0.69
PPM1E-201ENST00000308249 ELL2O00472 640 aaPredicted RBP19.37■□□□□ 0.69
PPM1E-201ENST00000308249 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.37■□□□□ 0.69
PPM1E-201ENST00000308249 R3HCC1Q9Y3T6 440 aaKnown RBP19.37■□□□□ 0.69
PPM1E-201ENST00000308249 ATP6V1DQ9Y5K8 247 aa19.37■□□□□ 0.69
PPM1E-201ENST00000308249 ANKRD45Q5TZF3 282 aa19.36■□□□□ 0.69
PPM1E-201ENST00000308249 BICD2Q8TD16 824 aa19.36■□□□□ 0.69
PPM1E-201ENST00000308249 CPLX2Q6PUV4 134 aaKnown RBP19.36■□□□□ 0.69
PPM1E-201ENST00000308249 RSPH6AQ9H0K4 717 aa19.35■□□□□ 0.69
PPM1E-201ENST00000308249 CPLX1O14810 134 aa19.35■□□□□ 0.69
PPM1E-201ENST00000308249 TIMELESSQ9UNS1 1208 aa19.34■□□□□ 0.69
PPM1E-201ENST00000308249 CCDC191Q8NCU4 936 aa19.34■□□□□ 0.69
PPM1E-201ENST00000308249 NFXL1Q6ZNB6 911 aa19.34■□□□□ 0.69
PPM1E-201ENST00000308249 VPS37DQ86XT2 251 aa19.34■□□□□ 0.69
PPM1E-201ENST00000308249 FOXD1Q16676 465 aa19.34■□□□□ 0.69
PPM1E-201ENST00000308249 DIAPH3Q9NSV4 1193 aa19.34■□□□□ 0.69
PPM1E-201ENST00000308249 CENPJQ9HC77 1338 aaPredicted RBP19.34■□□□□ 0.69
PPM1E-201ENST00000308249 ANO2Q9NQ90 1003 aa19.34■□□□□ 0.69
PPM1E-201ENST00000308249 SCRIBQ14160 1630 aa19.33■□□□□ 0.68
PPM1E-201ENST00000308249 TTLL5Q6EMB2 1281 aa19.33■□□□□ 0.68
PPM1E-201ENST00000308249 RRP7AQ9Y3A4 280 aaKnown RBP19.32■□□□□ 0.68
PPM1E-201ENST00000308249 H0YHG0 523 aa19.32■□□□□ 0.68
PPM1E-201ENST00000308249 NOM1Q5C9Z4 860 aaKnown RBP19.32■□□□□ 0.68
PPM1E-201ENST00000308249 CCNB3Q8WWL7 1395 aa19.32■□□□□ 0.68
PPM1E-201ENST00000308249 MNS1Q8NEH6 495 aa19.32■□□□□ 0.68
PPM1E-201ENST00000308249 EVA1CP58658 441 aa19.31■□□□□ 0.68
PPM1E-201ENST00000308249 DHX37Q8IY37 1157 aaKnown RBP19.31■□□□□ 0.68
PPM1E-201ENST00000308249 EPS15P42566 896 aa19.3■□□□□ 0.68
PPM1E-201ENST00000308249 HOOK1Q9UJC3 728 aaKnown RBP19.3■□□□□ 0.68
PPM1E-201ENST00000308249 KDM4AO75164 1064 aa19.3■□□□□ 0.68
PPM1E-201ENST00000308249 MTMR7Q9Y216 660 aa19.3■□□□□ 0.68
PPM1E-201ENST00000308249 CHMP4CQ96CF2 233 aa19.3■□□□□ 0.68
PPM1E-201ENST00000308249 BCL2L13Q9BXK5 485 aa19.29■□□□□ 0.68
PPM1E-201ENST00000308249 OFD1O75665 1012 aa19.29■□□□□ 0.68
PPM1E-201ENST00000308249 CAGE1Q8TC20 777 aa19.29■□□□□ 0.68
PPM1E-201ENST00000308249 ROCK2O75116 1388 aaKnown RBP19.29■□□□□ 0.68
PPM1E-201ENST00000308249 HSP90B2PQ58FF3 399 aa19.28■□□□□ 0.68
PPM1E-201ENST00000308249 IFT57Q9NWB7 429 aa19.28■□□□□ 0.68
PPM1E-201ENST00000308249 TMEM132AQ24JP5 1023 aa19.28■□□□□ 0.68
PPM1E-201ENST00000308249 FYB1O15117 783 aa19.28■□□□□ 0.68
PPM1E-201ENST00000308249 PDILTQ8N807 584 aa19.27■□□□□ 0.68
PPM1E-201ENST00000308249 EIF2S2P20042 333 aaKnown RBP19.27■□□□□ 0.68
PPM1E-201ENST00000308249 SYTL4Q96C24 671 aaPredicted RBP19.27■□□□□ 0.68
PPM1E-201ENST00000308249 ACBD3Q9H3P7 528 aa19.27■□□□□ 0.68
PPM1E-201ENST00000308249 CCER2I3L3R5 266 aa19.27■□□□□ 0.67
PPM1E-201ENST00000308249 LMOD3Q0VAK6 560 aa19.27■□□□□ 0.67
PPM1E-201ENST00000308249 NECTIN2Q92692 538 aa19.27■□□□□ 0.67
PPM1E-201ENST00000308249 SKOR2Q2VWA4 1001 aaPredicted RBP19.26■□□□□ 0.67
PPM1E-201ENST00000308249 ERICH2A1L162 156 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms