RNA–Protein interactions for RNA: ENST00000304523.9

LDB2-201, Transcript of LIM domain binding 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB2, Length 2,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-201ENST00000304523 SENP3-EIF4A1A0A087X0R7 540 aa12.56□□□□□ -0.4
LDB2-201ENST00000304523 ST20-MTHFSA0A0A6YYL1 179 aa12.56□□□□□ -0.4
LDB2-201ENST00000304523 NLRP13Q86W25 1043 aa12.56□□□□□ -0.4
LDB2-201ENST00000304523 TRPM1Q7Z4N2 1603 aa12.55□□□□□ -0.4
LDB2-201ENST00000304523 BLMP54132 1417 aaPredicted RBP12.54□□□□□ -0.4
LDB2-201ENST00000304523 WASHC2CQ9Y4E1 1318 aa12.54□□□□□ -0.4
LDB2-201ENST00000304523 NUP155O75694 1391 aa12.53□□□□□ -0.4
LDB2-201ENST00000304523 PPM1GO15355 546 aaPredicted RBP12.53□□□□□ -0.4
LDB2-201ENST00000304523 NPM2Q86SE8 214 aaKnown RBP12.53□□□□□ -0.4
LDB2-201ENST00000304523 LAMC1P11047 1609 aa12.53□□□□□ -0.4
LDB2-201ENST00000304523 GRIN2AQ12879 1464 aa12.53□□□□□ -0.4
LDB2-201ENST00000304523 MRC2Q9UBG0 1479 aa12.53□□□□□ -0.4
LDB2-201ENST00000304523 C9orf84Q5VXU9 1444 aa12.52□□□□□ -0.4
LDB2-201ENST00000304523 NEFMP07197 916 aa12.52□□□□□ -0.4
LDB2-201ENST00000304523 PLEKHH2Q8IVE3 1493 aa12.52□□□□□ -0.4
LDB2-201ENST00000304523 IFT140Q96RY7 1462 aa12.51□□□□□ -0.41
LDB2-201ENST00000304523 PLB1Q6P1J6 1458 aa12.51□□□□□ -0.41
LDB2-201ENST00000304523 ZNF608Q9ULD9 1512 aaPredicted RBP12.51□□□□□ -0.41
LDB2-201ENST00000304523 PER1O15534 1290 aaPredicted RBP12.51□□□□□ -0.41
LDB2-201ENST00000304523 DNAJC5BQ9UF47 199 aa12.51□□□□□ -0.41
LDB2-201ENST00000304523 EIF4G3O43432 1585 aaKnown RBP12.5□□□□□ -0.41
LDB2-201ENST00000304523 ABCC10Q5T3U5 1492 aa12.5□□□□□ -0.41
LDB2-201ENST00000304523 IL27Q8NEV9 243 aa12.5□□□□□ -0.41
LDB2-201ENST00000304523 LAS1LQ9Y4W2 734 aaKnown RBP12.5□□□□□ -0.41
LDB2-201ENST00000304523 PRAG1Q86YV5 1406 aa12.5□□□□□ -0.41
LDB2-201ENST00000304523 DDRGK1Q96HY6 314 aa12.49□□□□□ -0.41
LDB2-201ENST00000304523 GPRASP1Q5JY77 1395 aa12.49□□□□□ -0.41
LDB2-201ENST00000304523 COL17A1Q9UMD9 1497 aaPredicted RBP12.49□□□□□ -0.41
LDB2-201ENST00000304523 ARHGEF5Q12774 1597 aa12.49□□□□□ -0.41
LDB2-201ENST00000304523 ZNF777Q9ULD5 760 aaPredicted RBP12.49□□□□□ -0.41
LDB2-201ENST00000304523 DCAF11Q8TEB1 546 aa12.48□□□□□ -0.41
LDB2-201ENST00000304523 CDCA7LQ96GN5 454 aa12.48□□□□□ -0.41
LDB2-201ENST00000304523 PRDM15P57071 1507 aaPredicted RBP12.48□□□□□ -0.41
LDB2-201ENST00000304523 PRKCSHP14314 528 aaPredicted RBP12.47□□□□□ -0.41
LDB2-201ENST00000304523 KDM2AQ9Y2K7 1162 aa12.47□□□□□ -0.41
LDB2-201ENST00000304523 FAM135AQ9P2D6 1515 aa12.47□□□□□ -0.41
LDB2-201ENST00000304523 ANO8Q9HCE9 1232 aaPredicted RBP12.46□□□□□ -0.42
LDB2-201ENST00000304523 ABCA8O94911 1581 aa12.46□□□□□ -0.42
LDB2-201ENST00000304523 KDM2BQ8NHM5 1336 aa12.45□□□□□ -0.42
LDB2-201ENST00000304523 CRBNQ96SW2 442 aa12.45□□□□□ -0.42
LDB2-201ENST00000304523 SALL2Q9Y467 1007 aaPredicted RBP12.45□□□□□ -0.42
LDB2-201ENST00000304523 MAGI1Q96QZ7 1491 aaPredicted RBP12.44□□□□□ -0.42
LDB2-201ENST00000304523 EIF2AK4Q9P2K8 1649 aaKnown RBP12.44□□□□□ -0.42
LDB2-201ENST00000304523 MYO5CQ9NQX4 1742 aa12.43□□□□□ -0.42
LDB2-201ENST00000304523 PLIN1O60240 522 aa12.43□□□□□ -0.42
LDB2-201ENST00000304523 UNC13BO14795 1591 aa12.42□□□□□ -0.42
LDB2-201ENST00000304523 TESK2Q96S53 571 aa12.42□□□□□ -0.42
LDB2-201ENST00000304523 CCDC144AA2RUR9 1427 aa12.42□□□□□ -0.42
LDB2-201ENST00000304523 A2MP01023 1474 aa12.42□□□□□ -0.42
LDB2-201ENST00000304523 DISP3Q9P2K9 1392 aa12.42□□□□□ -0.42
LDB2-201ENST00000304523 TSPY4P0CV99 314 aa12.42□□□□□ -0.42
LDB2-201ENST00000304523 TSPY10P0CW01 314 aa12.42□□□□□ -0.42
LDB2-201ENST00000304523 SYNJ2O15056 1496 aa12.41□□□□□ -0.42
LDB2-201ENST00000304523 CARMIL2Q6F5E8 1435 aa12.41□□□□□ -0.42
LDB2-201ENST00000304523 GSE1Q14687 1217 aa12.41□□□□□ -0.42
LDB2-201ENST00000304523 CENPQQ7L2Z9 268 aaPredicted RBP12.4□□□□□ -0.42
LDB2-201ENST00000304523 RNF17Q9BXT8 1623 aaKnown RBP12.4□□□□□ -0.42
LDB2-201ENST00000304523 PLA2R1Q13018 1463 aa12.4□□□□□ -0.42
LDB2-201ENST00000304523 CLASP1Q7Z460 1538 aa12.4□□□□□ -0.42
LDB2-201ENST00000304523 NUP160Q12769 1436 aa12.4□□□□□ -0.42
LDB2-201ENST00000304523 ERBINQ96RT1 1412 aa12.4□□□□□ -0.42
LDB2-201ENST00000304523 CCDC141Q6ZP82 1450 aa12.4□□□□□ -0.43
LDB2-201ENST00000304523 ATP10BO94823 1461 aa12.39□□□□□ -0.43
LDB2-201ENST00000304523 PLEKHD1A6NEE1 506 aa12.39□□□□□ -0.43
LDB2-201ENST00000304523 NFKBIBQ15653 356 aa12.39□□□□□ -0.43
LDB2-201ENST00000304523 NBPF1Q3BBV0 1214 aa12.39□□□□□ -0.43
LDB2-201ENST00000304523 SKAP1Q86WV1 359 aa12.39□□□□□ -0.43
LDB2-201ENST00000304523 SAMD9LQ8IVG5 1584 aa12.39□□□□□ -0.43
LDB2-201ENST00000304523 CDC42BPBQ9Y5S2 1711 aa12.38□□□□□ -0.43
LDB2-201ENST00000304523 VIRMAQ69YN4 1812 aaKnown RBP12.38□□□□□ -0.43
LDB2-201ENST00000304523 PREX2Q70Z35 1606 aa12.38□□□□□ -0.43
LDB2-201ENST00000304523 MAST1Q9Y2H9 1570 aa12.38□□□□□ -0.43
LDB2-201ENST00000304523 CC2D1BQ5T0F9 858 aaKnown RBP12.38□□□□□ -0.43
LDB2-201ENST00000304523 C20orf194Q5TEA3 1177 aa12.38□□□□□ -0.43
LDB2-201ENST00000304523 IQGAP3Q86VI3 1631 aa12.37□□□□□ -0.43
LDB2-201ENST00000304523 PANK3Q9H999 370 aa12.37□□□□□ -0.43
LDB2-201ENST00000304523 RTN4Q9NQC3 1192 aaKnown RBP12.37□□□□□ -0.43
LDB2-201ENST00000304523 ZNF521Q96K83 1311 aa12.37□□□□□ -0.43
LDB2-201ENST00000304523 FAM161AQ3B820 660 aa12.37□□□□□ -0.43
LDB2-201ENST00000304523 C8orf34Q49A92 452 aa12.37□□□□□ -0.43
LDB2-201ENST00000304523 ATP10AO60312 1499 aa12.37□□□□□ -0.43
LDB2-201ENST00000304523 PLEKHH1Q9ULM0 1364 aa12.36□□□□□ -0.43
LDB2-201ENST00000304523 DUSP27Q5VZP5 1158 aa12.36□□□□□ -0.43
LDB2-201ENST00000304523 WDR7Q9Y4E6 1490 aa12.35□□□□□ -0.43
LDB2-201ENST00000304523 TMF1P82094 1093 aa12.35□□□□□ -0.43
LDB2-201ENST00000304523 ADAMTS8Q9UP79 889 aa12.35□□□□□ -0.43
LDB2-201ENST00000304523 HNRNPMP52272 730 aaKnown RBP eCLIP12.34□□□□□ -0.43
LDB2-201ENST00000304523 RSPH4AQ5TD94 716 aa12.34□□□□□ -0.43
LDB2-201ENST00000304523 BRPF3Q9ULD4 1205 aa12.34□□□□□ -0.43
LDB2-201ENST00000304523 IQGAP1P46940 1657 aa12.33□□□□□ -0.43
LDB2-201ENST00000304523 PLXNC1O60486 1568 aa12.33□□□□□ -0.44
LDB2-201ENST00000304523 MAGI2Q86UL8 1455 aa12.33□□□□□ -0.44
LDB2-201ENST00000304523 FRAT1Q92837 279 aaPredicted RBP12.33□□□□□ -0.44
LDB2-201ENST00000304523 JPH4Q96JJ6 628 aa12.33□□□□□ -0.44
LDB2-201ENST00000304523 SYNMO15061 1565 aa12.32□□□□□ -0.44
LDB2-201ENST00000304523 DAXXQ9UER7 740 aaPredicted RBP12.32□□□□□ -0.44
LDB2-201ENST00000304523 SLC4A3P48751 1232 aa12.32□□□□□ -0.44
LDB2-201ENST00000304523 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.32□□□□□ -0.44
LDB2-201ENST00000304523 EIF3AQ14152 1382 aaKnown RBP12.31□□□□□ -0.44
LDB2-201ENST00000304523 RGL3Q3MIN7 710 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms