RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 ZNF777Q9ULD5 760 aaPredicted RBP10.1□□□□□ -0.79
RGPD3-201ENST00000304514 MADDQ8WXG6 1647 aa10.1□□□□□ -0.79
RGPD3-201ENST00000304514 IFT172Q9UG01 1749 aa10.1□□□□□ -0.79
RGPD3-201ENST00000304514 USP47Q96K76 1375 aa10.09□□□□□ -0.79
RGPD3-201ENST00000304514 PKD2Q13563 968 aa10.09□□□□□ -0.79
RGPD3-201ENST00000304514 VWDEQ8N2E2 1590 aa10.09□□□□□ -0.79
RGPD3-201ENST00000304514 NUP155O75694 1391 aa10.08□□□□□ -0.8
RGPD3-201ENST00000304514 PLCH2O75038 1416 aa10.08□□□□□ -0.8
RGPD3-201ENST00000304514 HNRNPMP52272 730 aaKnown RBP eCLIP10.08□□□□□ -0.8
RGPD3-201ENST00000304514 TET3O43151 1660 aa10.08□□□□□ -0.8
RGPD3-201ENST00000304514 PRAG1Q86YV5 1406 aa10.07□□□□□ -0.8
RGPD3-201ENST00000304514 A2MP01023 1474 aa10.07□□□□□ -0.8
RGPD3-201ENST00000304514 ARID4BQ4LE39 1312 aaPredicted RBP10.07□□□□□ -0.8
RGPD3-201ENST00000304514 NEURL4Q96JN8 1562 aa10.07□□□□□ -0.8
RGPD3-201ENST00000304514 MROH1Q8NDA8 1641 aa10.07□□□□□ -0.8
RGPD3-201ENST00000304514 CCDC184Q52MB2 194 aa10.06□□□□□ -0.8
RGPD3-201ENST00000304514 TRPM2O94759 1503 aa10.06□□□□□ -0.8
RGPD3-201ENST00000304514 PRKRIP1Q9H875 184 aaPredicted RBP10.06□□□□□ -0.8
RGPD3-201ENST00000304514 CLTCL1P53675 1640 aa10.06□□□□□ -0.8
RGPD3-201ENST00000304514 KIAA1210Q9ULL0 1709 aa10.06□□□□□ -0.8
RGPD3-201ENST00000304514 MYOM1P52179 1685 aa10.05□□□□□ -0.8
RGPD3-201ENST00000304514 RSPH4AQ5TD94 716 aa10.04□□□□□ -0.8
RGPD3-201ENST00000304514 TSHZ2Q9NRE2 1034 aa10.04□□□□□ -0.8
RGPD3-201ENST00000304514 MROH2AA6NES4 1674 aa10.04□□□□□ -0.8
RGPD3-201ENST00000304514 GPRASP1Q5JY77 1395 aa10.03□□□□□ -0.8
RGPD3-201ENST00000304514 FKBP8Q14318 412 aa10.03□□□□□ -0.8
RGPD3-201ENST00000304514 RTEL1-TNFRSF6BF6WH68 1400 aa10.02□□□□□ -0.81
RGPD3-201ENST00000304514 ZC3H13Q5T200 1668 aaKnown RBP10.02□□□□□ -0.81
RGPD3-201ENST00000304514 COL17A1Q9UMD9 1497 aaPredicted RBP10.01□□□□□ -0.81
RGPD3-201ENST00000304514 TRAPPC8Q9Y2L5 1435 aa10.01□□□□□ -0.81
RGPD3-201ENST00000304514 WDR7Q9Y4E6 1490 aa10.01□□□□□ -0.81
RGPD3-201ENST00000304514 ATP7AQ04656 1500 aa10.01□□□□□ -0.81
RGPD3-201ENST00000304514 KIDINS220Q9ULH0 1771 aa10.01□□□□□ -0.81
RGPD3-201ENST00000304514 ROCK2O75116 1388 aaKnown RBP10□□□□□ -0.81
RGPD3-201ENST00000304514 CFAP74Q9C0B2 1584 aa10□□□□□ -0.81
RGPD3-201ENST00000304514 TSPY4P0CV99 314 aa10□□□□□ -0.81
RGPD3-201ENST00000304514 TSPY10P0CW01 314 aa10□□□□□ -0.81
RGPD3-201ENST00000304514 CCDC144AA2RUR9 1427 aa10□□□□□ -0.81
RGPD3-201ENST00000304514 MYO3AQ8NEV4 1616 aa9.99□□□□□ -0.81
RGPD3-201ENST00000304514 PPRC1Q5VV67 1664 aaKnown RBP9.99□□□□□ -0.81
RGPD3-201ENST00000304514 ZBED9Q6R2W3 1325 aa9.99□□□□□ -0.81
RGPD3-201ENST00000304514 KIF1BO60333 1816 aa9.98□□□□□ -0.81
RGPD3-201ENST00000304514 PTPRTO14522 1441 aa9.98□□□□□ -0.81
RGPD3-201ENST00000304514 SYNMO15061 1565 aa9.97□□□□□ -0.81
RGPD3-201ENST00000304514 HNRNPUQ00839 825 aaKnown RBP eCLIP9.97□□□□□ -0.81
RGPD3-201ENST00000304514 ABCA6Q8N139 1617 aa9.97□□□□□ -0.81
RGPD3-201ENST00000304514 SMG6Q86US8 1419 aaKnown RBP9.96□□□□□ -0.81
RGPD3-201ENST00000304514 LRPPRCP42704 1394 aaKnown RBP9.95□□□□□ -0.82
RGPD3-201ENST00000304514 KTN1Q86UP2 1357 aaKnown RBP9.95□□□□□ -0.82
RGPD3-201ENST00000304514 MAP3K4Q9Y6R4 1608 aa9.95□□□□□ -0.82
RGPD3-201ENST00000304514 PPLO60437 1756 aa9.95□□□□□ -0.82
RGPD3-201ENST00000304514 BCANQ96GW7 911 aa9.95□□□□□ -0.82
RGPD3-201ENST00000304514 LMTK2Q8IWU2 1503 aa9.95□□□□□ -0.82
RGPD3-201ENST00000304514 EFCAB6Q5THR3 1501 aa9.95□□□□□ -0.82
RGPD3-201ENST00000304514 ZMYM4Q5VZL5 1548 aa9.95□□□□□ -0.82
RGPD3-201ENST00000304514 FRMPD1Q5SYB0 1578 aa9.94□□□□□ -0.82
RGPD3-201ENST00000304514 KDM5AP29375 1690 aaKnown RBP9.94□□□□□ -0.82
RGPD3-201ENST00000304514 CARD11Q9BXL7 1154 aa9.93□□□□□ -0.82
RGPD3-201ENST00000304514 FANCAO15360 1455 aa9.93□□□□□ -0.82
RGPD3-201ENST00000304514 SCAPERQ9BY12 1400 aa9.93□□□□□ -0.82
RGPD3-201ENST00000304514 PARD3Q8TEW0 1356 aa9.93□□□□□ -0.82
RGPD3-201ENST00000304514 DCAF11Q8TEB1 546 aa9.93□□□□□ -0.82
RGPD3-201ENST00000304514 DISP3Q9P2K9 1392 aa9.93□□□□□ -0.82
RGPD3-201ENST00000304514 MRS2Q9HD23 443 aa9.93□□□□□ -0.82
RGPD3-201ENST00000304514 SIGLEC1Q9BZZ2 1709 aa9.92□□□□□ -0.82
RGPD3-201ENST00000304514 NRXN1Q9ULB1 1477 aa9.92□□□□□ -0.82
RGPD3-201ENST00000304514 MYOM2P54296 1465 aa9.91□□□□□ -0.82
RGPD3-201ENST00000304514 ZNF326Q5BKZ1 582 aaKnown RBP9.91□□□□□ -0.82
RGPD3-201ENST00000304514 HECW2Q9P2P5 1572 aa9.91□□□□□ -0.82
RGPD3-201ENST00000304514 CAMSAP1Q5T5Y3 1602 aa9.91□□□□□ -0.82
RGPD3-201ENST00000304514 ADGRB3O60242 1522 aa9.91□□□□□ -0.82
RGPD3-201ENST00000304514 ST20-MTHFSA0A0A6YYL1 179 aa9.91□□□□□ -0.82
RGPD3-201ENST00000304514 BRD4O60885 1362 aaPredicted RBP9.91□□□□□ -0.82
RGPD3-201ENST00000304514 NEFLP07196 543 aa9.9□□□□□ -0.82
RGPD3-201ENST00000304514 ERICH6BQ5W0A0 696 aa9.9□□□□□ -0.82
RGPD3-201ENST00000304514 PIK3C2BO00750 1634 aa9.9□□□□□ -0.82
RGPD3-201ENST00000304514 FAM9BQ8IZU0 186 aa9.9□□□□□ -0.83
RGPD3-201ENST00000304514 RNF123Q5XPI4 1314 aa9.9□□□□□ -0.83
RGPD3-201ENST00000304514 BLMP54132 1417 aaPredicted RBP9.89□□□□□ -0.83
RGPD3-201ENST00000304514 ADGRL1O94910 1474 aa9.89□□□□□ -0.83
RGPD3-201ENST00000304514 UGGT1Q9NYU2 1555 aa9.89□□□□□ -0.83
RGPD3-201ENST00000304514 SETBP1Q9Y6X0 1596 aa9.89□□□□□ -0.83
RGPD3-201ENST00000304514 ASXL2Q76L83 1435 aa9.89□□□□□ -0.83
RGPD3-201ENST00000304514 RICTORQ6R327 1708 aa9.89□□□□□ -0.83
RGPD3-201ENST00000304514 INSRP06213 1382 aa9.88□□□□□ -0.83
RGPD3-201ENST00000304514 TESK2Q96S53 571 aa9.88□□□□□ -0.83
RGPD3-201ENST00000304514 MYBBP1AQ9BQG0 1328 aaKnown RBP9.88□□□□□ -0.83
RGPD3-201ENST00000304514 PNISRQ8TF01 805 aaKnown RBP9.88□□□□□ -0.83
RGPD3-201ENST00000304514 KDM2AQ9Y2K7 1162 aa9.88□□□□□ -0.83
RGPD3-201ENST00000304514 QRICH2Q9H0J4 1663 aa9.88□□□□□ -0.83
RGPD3-201ENST00000304514 NBPF1Q3BBV0 1214 aa9.88□□□□□ -0.83
RGPD3-201ENST00000304514 EFCAB2Q5VUJ9 269 aa9.87□□□□□ -0.83
RGPD3-201ENST00000304514 USP32Q8NFA0 1604 aa9.86□□□□□ -0.83
RGPD3-201ENST00000304514 RALBP1Q15311 655 aa9.86□□□□□ -0.83
RGPD3-201ENST00000304514 PER1O15534 1290 aaPredicted RBP9.86□□□□□ -0.83
RGPD3-201ENST00000304514 SCAF11Q99590 1463 aaKnown RBP9.86□□□□□ -0.83
RGPD3-201ENST00000304514 ZNF518AQ6AHZ1 1483 aa9.85□□□□□ -0.83
RGPD3-201ENST00000304514 POGZQ7Z3K3 1410 aa9.84□□□□□ -0.83
RGPD3-201ENST00000304514 SHPRHQ149N8 1683 aa9.84□□□□□ -0.83
RGPD3-201ENST00000304514 IRX6P78412 446 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms