RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 DAPK1P53355 1430 aa20.02■□□□□ 0.8
RAB40A-201ENST00000304236 KIAA1107Q9UPP5 1409 aa20.02■□□□□ 0.8
RAB40A-201ENST00000304236 TRIM52Q96A61 297 aa20.02■□□□□ 0.8
RAB40A-201ENST00000304236 SYCP2Q9BX26 1530 aa20.02■□□□□ 0.8
RAB40A-201ENST00000304236 KIDINS220Q9ULH0 1771 aa20.01■□□□□ 0.79
RAB40A-201ENST00000304236 CCER2I3L3R5 266 aa20■□□□□ 0.79
RAB40A-201ENST00000304236 FBXO41Q8TF61 875 aa19.98■□□□□ 0.79
RAB40A-201ENST00000304236 MPHOSPH9Q99550 1183 aa19.98■□□□□ 0.79
RAB40A-201ENST00000304236 ABCC5O15440 1437 aa19.98■□□□□ 0.79
RAB40A-201ENST00000304236 ANP32CO43423 234 aa19.97■□□□□ 0.79
RAB40A-201ENST00000304236 PREX1Q8TCU6 1659 aa19.96■□□□□ 0.79
RAB40A-201ENST00000304236 UHRF1BP1Q6BDS2 1440 aa19.95■□□□□ 0.78
RAB40A-201ENST00000304236 CNTLNQ9NXG0 1405 aa19.95■□□□□ 0.78
RAB40A-201ENST00000304236 ATP7AQ04656 1500 aa19.93■□□□□ 0.78
RAB40A-201ENST00000304236 HIRIP3Q9BW71 556 aaPredicted RBP19.93■□□□□ 0.78
RAB40A-201ENST00000304236 ZNF644Q9H582 1327 aaPredicted RBP19.92■□□□□ 0.78
RAB40A-201ENST00000304236 SETD1BQ9UPS6 1966 aaKnown RBP19.92■□□□□ 0.78
RAB40A-201ENST00000304236 INO80Q9ULG1 1556 aaPredicted RBP19.9■□□□□ 0.78
RAB40A-201ENST00000304236 A2MP01023 1474 aa19.89■□□□□ 0.78
RAB40A-201ENST00000304236 C3P01024 1663 aa19.89■□□□□ 0.77
RAB40A-201ENST00000304236 DMRT2Q9Y5R5 561 aa19.89■□□□□ 0.77
RAB40A-201ENST00000304236 ADGBQ8N7X0 1667 aa19.89■□□□□ 0.77
RAB40A-201ENST00000304236 CAMSAP2Q08AD1 1489 aa19.88■□□□□ 0.77
RAB40A-201ENST00000304236 ANKRD30BQ9BXX2 1392 aa19.87■□□□□ 0.77
RAB40A-201ENST00000304236 MBD5Q9P267 1494 aa19.87■□□□□ 0.77
RAB40A-201ENST00000304236 SUPT16HQ9Y5B9 1047 aaKnown RBP19.86■□□□□ 0.77
RAB40A-201ENST00000304236 RPRD2Q5VT52 1461 aaKnown RBP19.85■□□□□ 0.77
RAB40A-201ENST00000304236 ZMYM3Q14202 1370 aa19.85■□□□□ 0.77
RAB40A-201ENST00000304236 ADGRL2O95490 1459 aa19.85■□□□□ 0.77
RAB40A-201ENST00000304236 PLXNC1O60486 1568 aa19.85■□□□□ 0.77
RAB40A-201ENST00000304236 RTEL1-TNFRSF6BF6WH68 1400 aa19.85■□□□□ 0.77
RAB40A-201ENST00000304236 GGT6Q6P531 493 aa19.84■□□□□ 0.77
RAB40A-201ENST00000304236 EIF4G2P78344 907 aaKnown RBP eCLIP19.84■□□□□ 0.77
RAB40A-201ENST00000304236 RSPH4AQ5TD94 716 aa19.84■□□□□ 0.77
RAB40A-201ENST00000304236 CERKQ8TCT0 537 aa19.83■□□□□ 0.77
RAB40A-201ENST00000304236 PPP6R1Q9UPN7 881 aa19.83■□□□□ 0.77
RAB40A-201ENST00000304236 NPATQ14207 1427 aa19.83■□□□□ 0.76
RAB40A-201ENST00000304236 CROCC2H7BZ55 1655 aa19.83■□□□□ 0.76
RAB40A-201ENST00000304236 L3MBTL2Q969R5 705 aa19.83■□□□□ 0.76
RAB40A-201ENST00000304236 HSPA5P11021 654 aaKnown RBP19.82■□□□□ 0.76
RAB40A-201ENST00000304236 MROH2AA6NES4 1674 aa19.82■□□□□ 0.76
RAB40A-201ENST00000304236 NCOA1Q15788 1441 aa19.82■□□□□ 0.76
RAB40A-201ENST00000304236 SLC4A1APQ9BWU0 796 aaKnown RBP19.81■□□□□ 0.76
RAB40A-201ENST00000304236 CCDC141Q6ZP82 1450 aa19.8■□□□□ 0.76
RAB40A-201ENST00000304236 DHX29Q7Z478 1369 aaKnown RBP19.8■□□□□ 0.76
RAB40A-201ENST00000304236 STRCQ7RTU9 1775 aa19.79■□□□□ 0.76
RAB40A-201ENST00000304236 ANKRD30AQ9BXX3 1397 aa19.78■□□□□ 0.76
RAB40A-201ENST00000304236 PTPRTO14522 1441 aa19.77■□□□□ 0.75
RAB40A-201ENST00000304236 PZPP20742 1482 aa19.77■□□□□ 0.75
RAB40A-201ENST00000304236 CLTCQ00610 1675 aaKnown RBP19.76■□□□□ 0.75
RAB40A-201ENST00000304236 FOXD1Q16676 465 aa19.76■□□□□ 0.75
RAB40A-201ENST00000304236 TSPY4P0CV99 314 aa19.75■□□□□ 0.75
RAB40A-201ENST00000304236 TSPY10P0CW01 314 aa19.75■□□□□ 0.75
RAB40A-201ENST00000304236 SHANK2Q9UPX8 1470 aa19.75■□□□□ 0.75
RAB40A-201ENST00000304236 WASHC2AQ641Q2 1341 aa19.75■□□□□ 0.75
RAB40A-201ENST00000304236 KIF3BO15066 747 aa19.74■□□□□ 0.75
RAB40A-201ENST00000304236 ARHGEF5Q12774 1597 aa19.72■□□□□ 0.75
RAB40A-201ENST00000304236 CAMSAP1Q5T5Y3 1602 aa19.69■□□□□ 0.74
RAB40A-201ENST00000304236 ANKRD50Q9ULJ7 1429 aa19.69■□□□□ 0.74
RAB40A-201ENST00000304236 NBPF8Q3BBV2 869 aa19.68■□□□□ 0.74
RAB40A-201ENST00000304236 CCDC7Q96M83 1385 aa19.68■□□□□ 0.74
RAB40A-201ENST00000304236 POLR1AO95602 1720 aaPredicted RBP19.67■□□□□ 0.74
RAB40A-201ENST00000304236 WASHC2CQ9Y4E1 1318 aa19.67■□□□□ 0.74
RAB40A-201ENST00000304236 MYO3AQ8NEV4 1616 aa19.66■□□□□ 0.74
RAB40A-201ENST00000304236 NCKAP5LQ9HCH0 1330 aa19.66■□□□□ 0.74
RAB40A-201ENST00000304236 FAM135AQ9P2D6 1515 aa19.65■□□□□ 0.74
RAB40A-201ENST00000304236 PKD2Q13563 968 aa19.65■□□□□ 0.74
RAB40A-201ENST00000304236 SPATA31E1Q6ZUB1 1445 aa19.65■□□□□ 0.74
RAB40A-201ENST00000304236 CEP170BQ9Y4F5 1589 aaPredicted RBP19.64■□□□□ 0.74
RAB40A-201ENST00000304236 ZNF142P52746 1687 aaPredicted RBP19.64■□□□□ 0.73
RAB40A-201ENST00000304236 KDM5DQ9BY66 1539 aa19.64■□□□□ 0.73
RAB40A-201ENST00000304236 PLA2R1Q13018 1463 aa19.64■□□□□ 0.73
RAB40A-201ENST00000304236 NEFLP07196 543 aa19.63■□□□□ 0.73
RAB40A-201ENST00000304236 FBXO31Q5XUX0 539 aaPredicted RBP19.62■□□□□ 0.73
RAB40A-201ENST00000304236 TNRQ92752 1358 aa19.62■□□□□ 0.73
RAB40A-201ENST00000304236 A2ML1A8K2U0 1454 aa19.61■□□□□ 0.73
RAB40A-201ENST00000304236 MAST1Q9Y2H9 1570 aa19.61■□□□□ 0.73
RAB40A-201ENST00000304236 LTBP4Q8N2S1 1624 aa19.59■□□□□ 0.73
RAB40A-201ENST00000304236 FKBP8Q14318 412 aa19.59■□□□□ 0.73
RAB40A-201ENST00000304236 NUP155O75694 1391 aa19.58■□□□□ 0.73
RAB40A-201ENST00000304236 C11orf95C9JLR9 678 aaPredicted RBP19.58■□□□□ 0.73
RAB40A-201ENST00000304236 KIF15Q9NS87 1388 aa19.56■□□□□ 0.72
RAB40A-201ENST00000304236 KIF7Q2M1P5 1343 aa19.55■□□□□ 0.72
RAB40A-201ENST00000304236 IQSEC2Q5JU85 1478 aa19.55■□□□□ 0.72
RAB40A-201ENST00000304236 PRKRIP1Q9H875 184 aaPredicted RBP19.55■□□□□ 0.72
RAB40A-201ENST00000304236 ZNF335Q9H4Z2 1342 aaPredicted RBP19.54■□□□□ 0.72
RAB40A-201ENST00000304236 RNF17Q9BXT8 1623 aaKnown RBP19.54■□□□□ 0.72
RAB40A-201ENST00000304236 HNRNPUQ00839 825 aaKnown RBP eCLIP19.53■□□□□ 0.72
RAB40A-201ENST00000304236 EIF2AK4Q9P2K8 1649 aaKnown RBP19.53■□□□□ 0.72
RAB40A-201ENST00000304236 DUOX2Q9NRD8 1548 aa19.52■□□□□ 0.72
RAB40A-201ENST00000304236 THEMISQ8N1K5 641 aaPredicted RBP19.52■□□□□ 0.72
RAB40A-201ENST00000304236 NLRP1Q9C000 1473 aa19.52■□□□□ 0.72
RAB40A-201ENST00000304236 ABCC3O15438 1527 aa19.51■□□□□ 0.71
RAB40A-201ENST00000304236 RALGAPBQ86X10 1494 aa19.5■□□□□ 0.71
RAB40A-201ENST00000304236 USP47Q96K76 1375 aa19.5■□□□□ 0.71
RAB40A-201ENST00000304236 ANKLE2Q86XL3 938 aa19.5■□□□□ 0.71
RAB40A-201ENST00000304236 ZC3H13Q5T200 1668 aaKnown RBP19.49■□□□□ 0.71
RAB40A-201ENST00000304236 UGGT1Q9NYU2 1555 aa19.47■□□□□ 0.71
RAB40A-201ENST00000304236 ERBINQ96RT1 1412 aa19.46■□□□□ 0.71
RAB40A-201ENST00000304236 MROH1Q8NDA8 1641 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms