RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 TRAK1Q9UPV9 953 aa26.35■■□□□ 1.81
LETM1-201ENST00000302787 PDE4AP27815 886 aa26.35■■□□□ 1.81
LETM1-201ENST00000302787 PLIN1O60240 522 aa26.35■■□□□ 1.81
LETM1-201ENST00000302787 KIAA2012Q0VF49 1180 aa26.35■■□□□ 1.81
LETM1-201ENST00000302787 WASHC2CQ9Y4E1 1318 aa26.35■■□□□ 1.81
LETM1-201ENST00000302787 LMOD3Q0VAK6 560 aa26.34■■□□□ 1.81
LETM1-201ENST00000302787 TRIM6-TRIM34B2RNG4 842 aa26.34■■□□□ 1.81
LETM1-201ENST00000302787 CHMP4AQ9BY43 222 aa26.34■■□□□ 1.81
LETM1-201ENST00000302787 SLC4A10Q6U841 1118 aa26.32■■□□□ 1.8
LETM1-201ENST00000302787 FOXD4L1Q9NU39 408 aa26.31■■□□□ 1.8
LETM1-201ENST00000302787 FAM161AQ3B820 660 aa26.31■■□□□ 1.8
LETM1-201ENST00000302787 CRBNQ96SW2 442 aa26.29■■□□□ 1.8
LETM1-201ENST00000302787 HTATSF1O43719 755 aaKnown RBP26.29■■□□□ 1.8
LETM1-201ENST00000302787 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.29■■□□□ 1.8
LETM1-201ENST00000302787 E9PSI1 815 aa26.28■■□□□ 1.8
LETM1-201ENST00000302787 GPATCH3Q96I76 525 aa26.28■■□□□ 1.8
LETM1-201ENST00000302787 CSB-PGBD3P0DP91 1061 aa26.28■■□□□ 1.8
LETM1-201ENST00000302787 TRHP20396 242 aaPredicted RBP26.27■■□□□ 1.8
LETM1-201ENST00000302787 USP35Q9P2H5 1018 aa26.26■■□□□ 1.79
LETM1-201ENST00000302787 FANCD2Q9BXW9 1451 aa26.26■■□□□ 1.79
LETM1-201ENST00000302787 UACAQ9BZF9 1416 aa26.25■■□□□ 1.79
LETM1-201ENST00000302787 BCL2L13Q9BXK5 485 aa26.25■■□□□ 1.79
LETM1-201ENST00000302787 HDAC5Q9UQL6 1122 aa26.24■■□□□ 1.79
LETM1-201ENST00000302787 NOL8Q76FK4 1167 aaKnown RBP26.23■■□□□ 1.79
LETM1-201ENST00000302787 ZNF330Q9Y3S2 320 aaPredicted RBP26.23■■□□□ 1.79
LETM1-201ENST00000302787 SLC4A3P48751 1232 aa26.22■■□□□ 1.79
LETM1-201ENST00000302787 ST18O60284 1047 aa26.21■■□□□ 1.79
LETM1-201ENST00000302787 ZKSCAN2Q63HK3 967 aa26.21■■□□□ 1.79
LETM1-201ENST00000302787 CGNL1Q0VF96 1302 aa26.2■■□□□ 1.78
LETM1-201ENST00000302787 NGDNQ8NEJ9 315 aaKnown RBP26.2■■□□□ 1.78
LETM1-201ENST00000302787 AMPHP49418 695 aa26.19■■□□□ 1.78
LETM1-201ENST00000302787 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.19■■□□□ 1.78
LETM1-201ENST00000302787 FANCIQ9NVI1 1328 aa26.19■■□□□ 1.78
LETM1-201ENST00000302787 DDX11L8A8MPP1 907 aa26.18■■□□□ 1.78
LETM1-201ENST00000302787 HSP90B1P14625 803 aaKnown RBP26.18■■□□□ 1.78
LETM1-201ENST00000302787 COG6Q9Y2V7 657 aa26.18■■□□□ 1.78
LETM1-201ENST00000302787 CHMP3Q9Y3E7 222 aa26.17■■□□□ 1.78
LETM1-201ENST00000302787 CSPP1Q1MSJ5 1256 aa26.17■■□□□ 1.78
LETM1-201ENST00000302787 GORABQ5T7V8 394 aa26.17■■□□□ 1.78
LETM1-201ENST00000302787 FGD6Q6ZV73 1430 aa26.17■■□□□ 1.78
LETM1-201ENST00000302787 APAF1O14727 1248 aa26.17■■□□□ 1.78
LETM1-201ENST00000302787 IGF1RP08069 1367 aa26.17■■□□□ 1.78
LETM1-201ENST00000302787 KIF21BO75037 1637 aa26.16■■□□□ 1.78
LETM1-201ENST00000302787 ANKRD45Q5TZF3 282 aa26.15■■□□□ 1.78
LETM1-201ENST00000302787 CCDC7Q96M83 1385 aa26.15■■□□□ 1.78
LETM1-201ENST00000302787 EID1Q9Y6B2 187 aa26.15■■□□□ 1.78
LETM1-201ENST00000302787 EVC2Q86UK5 1308 aa26.15■■□□□ 1.78
LETM1-201ENST00000302787 ELL2O00472 640 aaPredicted RBP26.15■■□□□ 1.78
LETM1-201ENST00000302787 ISY1Q9ULR0 285 aaKnown RBP26.13■■□□□ 1.77
LETM1-201ENST00000302787 MYOM3Q5VTT5 1437 aa26.13■■□□□ 1.77
LETM1-201ENST00000302787 ARID3AQ99856 593 aa26.12■■□□□ 1.77
LETM1-201ENST00000302787 LTV1Q96GA3 475 aaPredicted RBP26.12■■□□□ 1.77
LETM1-201ENST00000302787 NUTM2FA1L443 756 aa26.11■■□□□ 1.77
LETM1-201ENST00000302787 FGD5Q6ZNL6 1462 aa26.11■■□□□ 1.77
LETM1-201ENST00000302787 KIF7Q2M1P5 1343 aa26.11■■□□□ 1.77
LETM1-201ENST00000302787 TPM4P67936 248 aa26.11■■□□□ 1.77
LETM1-201ENST00000302787 PTPRGP23470 1445 aa26.11■■□□□ 1.77
LETM1-201ENST00000302787 CUX1P39880 1505 aa26.11■■□□□ 1.77
LETM1-201ENST00000302787 GSE1Q14687 1217 aa26.11■■□□□ 1.77
LETM1-201ENST00000302787 FOXD4L5Q5VV16 416 aaPredicted RBP26.1■■□□□ 1.77
LETM1-201ENST00000302787 FOXD4L4Q8WXT5 416 aaPredicted RBP26.1■■□□□ 1.77
LETM1-201ENST00000302787 VGFO15240 615 aaPredicted RBP26.1■■□□□ 1.77
LETM1-201ENST00000302787 CNTLNQ9NXG0 1405 aa26.09■■□□□ 1.77
LETM1-201ENST00000302787 PHF14O94880 888 aa26.09■■□□□ 1.77
LETM1-201ENST00000302787 TAF7LQ5H9L4 462 aa26.09■■□□□ 1.77
LETM1-201ENST00000302787 KIF16BQ96L93 1317 aa26.08■■□□□ 1.77
LETM1-201ENST00000302787 LRRC9Q6ZRR7 1453 aa26.07■■□□□ 1.76
LETM1-201ENST00000302787 COG3Q96JB2 828 aa26.07■■□□□ 1.76
LETM1-201ENST00000302787 RILPL2Q969X0 211 aa26.05■■□□□ 1.76
LETM1-201ENST00000302787 NGEFQ8N5V2 710 aa26.04■■□□□ 1.76
LETM1-201ENST00000302787 GAPVD1Q14C86 1478 aa26.04■■□□□ 1.76
LETM1-201ENST00000302787 DDX19BQ9UMR2 479 aa26.03■■□□□ 1.76
LETM1-201ENST00000302787 DDX49Q9Y6V7 483 aaKnown RBP26.03■■□□□ 1.76
LETM1-201ENST00000302787 MINK1Q8N4C8 1332 aaPredicted RBP26.02■■□□□ 1.76
LETM1-201ENST00000302787 SKOR2Q2VWA4 1001 aaPredicted RBP26.01■■□□□ 1.76
LETM1-201ENST00000302787 ZNF644Q9H582 1327 aaPredicted RBP26.01■■□□□ 1.76
LETM1-201ENST00000302787 RAD54L2Q9Y4B4 1467 aa26■■□□□ 1.75
LETM1-201ENST00000302787 CLSTN1O94985 981 aa26■■□□□ 1.75
LETM1-201ENST00000302787 DZIP1LQ8IYY4 767 aaKnown RBP26■■□□□ 1.75
LETM1-201ENST00000302787 CCDC34Q96HJ3 373 aa25.99■■□□□ 1.75
LETM1-201ENST00000302787 DIAPH1O60610 1272 aaKnown RBP25.98■■□□□ 1.75
LETM1-201ENST00000302787 KIF3AQ9Y496 699 aa25.97■■□□□ 1.75
LETM1-201ENST00000302787 RUNDC1Q96C34 613 aa25.96■■□□□ 1.75
LETM1-201ENST00000302787 WASHC2AQ641Q2 1341 aa25.96■■□□□ 1.75
LETM1-201ENST00000302787 RIPK4P57078 832 aa25.96■■□□□ 1.75
LETM1-201ENST00000302787 MIA2Q96PC5 1412 aa25.94■■□□□ 1.74
LETM1-201ENST00000302787 NCOA2Q15596 1464 aa25.93■■□□□ 1.74
LETM1-201ENST00000302787 CASKIN1Q8WXD9 1431 aa25.93■■□□□ 1.74
LETM1-201ENST00000302787 FYCO1Q9BQS8 1478 aa25.92■■□□□ 1.74
LETM1-201ENST00000302787 API5Q9BZZ5 524 aaKnown RBP25.91■■□□□ 1.74
LETM1-201ENST00000302787 ATP6V1DQ9Y5K8 247 aa25.91■■□□□ 1.74
LETM1-201ENST00000302787 SF3A1Q15459 793 aaKnown RBP25.91■■□□□ 1.74
LETM1-201ENST00000302787 REC8O95072 547 aa25.9■■□□□ 1.74
LETM1-201ENST00000302787 H3BQV1 296 aa25.9■■□□□ 1.74
LETM1-201ENST00000302787 FOXD4L6Q3SYB3 417 aaPredicted RBP25.9■■□□□ 1.74
LETM1-201ENST00000302787 IFFO2Q5TF58 517 aa25.9■■□□□ 1.74
LETM1-201ENST00000302787 FOXD4L3Q6VB84 417 aaPredicted RBP25.9■■□□□ 1.74
LETM1-201ENST00000302787 ANKRD50Q9ULJ7 1429 aa25.89■■□□□ 1.74
LETM1-201ENST00000302787 BRD4O60885 1362 aaPredicted RBP25.89■■□□□ 1.74
LETM1-201ENST00000302787 RSPH6AQ9H0K4 717 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms