RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 CNTLNQ9NXG0 1405 aa15.61■□□□□ 0.09
PDGFD-201ENST00000302251 ARID3AQ99856 593 aa15.61■□□□□ 0.09
PDGFD-201ENST00000302251 NUP155O75694 1391 aa15.61■□□□□ 0.09
PDGFD-201ENST00000302251 IQGAP2Q13576 1575 aa15.6■□□□□ 0.09
PDGFD-201ENST00000302251 MYOM3Q5VTT5 1437 aa15.6■□□□□ 0.09
PDGFD-201ENST00000302251 USP47Q96K76 1375 aa15.59■□□□□ 0.09
PDGFD-201ENST00000302251 MYBBP1AQ9BQG0 1328 aaKnown RBP15.59■□□□□ 0.09
PDGFD-201ENST00000302251 ROCK2O75116 1388 aaKnown RBP15.59■□□□□ 0.09
PDGFD-201ENST00000302251 ZBTB7CA1YPR0 619 aa15.59■□□□□ 0.09
PDGFD-201ENST00000302251 FRAT2O75474 233 aaPredicted RBP15.58■□□□□ 0.09
PDGFD-201ENST00000302251 L1TD1Q5T7N2 865 aaKnown RBP15.58■□□□□ 0.08
PDGFD-201ENST00000302251 FAM161AQ3B820 660 aa15.58■□□□□ 0.08
PDGFD-201ENST00000302251 DISP1Q96F81 1524 aa15.57■□□□□ 0.08
PDGFD-201ENST00000302251 GOLGA2Q08379 1002 aa15.57■□□□□ 0.08
PDGFD-201ENST00000302251 PDE3BQ13370 1112 aa15.57■□□□□ 0.08
PDGFD-201ENST00000302251 PANK3Q9H999 370 aa15.57■□□□□ 0.08
PDGFD-201ENST00000302251 ZNF608Q9ULD9 1512 aaPredicted RBP15.56■□□□□ 0.08
PDGFD-201ENST00000302251 BCL2L13Q9BXK5 485 aa15.56■□□□□ 0.08
PDGFD-201ENST00000302251 POLR1AO95602 1720 aaPredicted RBP15.55■□□□□ 0.08
PDGFD-201ENST00000302251 MS4A1P11836 297 aa15.55■□□□□ 0.08
PDGFD-201ENST00000302251 BACH2Q9BYV9 841 aa15.55■□□□□ 0.08
PDGFD-201ENST00000302251 EIF4G3O43432 1585 aaKnown RBP15.55■□□□□ 0.08
PDGFD-201ENST00000302251 KIAA0556O60303 1618 aa15.55■□□□□ 0.08
PDGFD-201ENST00000302251 HSP90AB1P08238 724 aaKnown RBP15.54■□□□□ 0.08
PDGFD-201ENST00000302251 MFAP1P55081 439 aaKnown RBP15.54■□□□□ 0.08
PDGFD-201ENST00000302251 FOXD4L1Q9NU39 408 aa15.54■□□□□ 0.08
PDGFD-201ENST00000302251 HNRNPMP52272 730 aaKnown RBP eCLIP15.53■□□□□ 0.08
PDGFD-201ENST00000302251 PNISRQ8TF01 805 aaKnown RBP15.53■□□□□ 0.08
PDGFD-201ENST00000302251 PDS5BQ9NTI5 1447 aa15.53■□□□□ 0.08
PDGFD-201ENST00000302251 CDK13Q14004 1512 aaKnown RBP15.53■□□□□ 0.08
PDGFD-201ENST00000302251 VSIG10Q8N0Z9 540 aa15.53■□□□□ 0.08
PDGFD-201ENST00000302251 KIF15Q9NS87 1388 aa15.53■□□□□ 0.08
PDGFD-201ENST00000302251 GOLGA6L22H0YM25 854 aa15.53■□□□□ 0.08
PDGFD-201ENST00000302251 GOLGA6L3A6NEY3 463 aa15.53■□□□□ 0.08
PDGFD-201ENST00000302251 CROCC2H7BZ55 1655 aa15.52■□□□□ 0.08
PDGFD-201ENST00000302251 EPRSP07814 1512 aaKnown RBP15.52■□□□□ 0.08
PDGFD-201ENST00000302251 CENPQQ7L2Z9 268 aaPredicted RBP15.52■□□□□ 0.07
PDGFD-201ENST00000302251 COG6Q9Y2V7 657 aa15.52■□□□□ 0.07
PDGFD-201ENST00000302251 RRP7AQ9Y3A4 280 aaKnown RBP15.52■□□□□ 0.07
PDGFD-201ENST00000302251 U2SURPO15042 1029 aaKnown RBP15.51■□□□□ 0.07
PDGFD-201ENST00000302251 CDCA8Q53HL2 280 aa15.51■□□□□ 0.07
PDGFD-201ENST00000302251 HSCBQ8IWL3 235 aa15.51■□□□□ 0.07
PDGFD-201ENST00000302251 ADCY10Q96PN6 1610 aa15.5■□□□□ 0.07
PDGFD-201ENST00000302251 MRC2Q9UBG0 1479 aa15.49■□□□□ 0.07
PDGFD-201ENST00000302251 DNTTIP2Q5QJE6 756 aaKnown RBP15.49■□□□□ 0.07
PDGFD-201ENST00000302251 CEP170Q5SW79 1584 aa15.49■□□□□ 0.07
PDGFD-201ENST00000302251 APAF1O14727 1248 aa15.48■□□□□ 0.07
PDGFD-201ENST00000302251 DNMT1P26358 1616 aaKnown RBP15.48■□□□□ 0.07
PDGFD-201ENST00000302251 PTMAP06454 111 aaKnown RBP15.48■□□□□ 0.07
PDGFD-201ENST00000302251 RSPH6AQ9H0K4 717 aa15.48■□□□□ 0.07
PDGFD-201ENST00000302251 CFAP53Q96M91 514 aa15.46■□□□□ 0.07
PDGFD-201ENST00000302251 MYH16Q9H6N6 1097 aa15.46■□□□□ 0.06
PDGFD-201ENST00000302251 HSP90AA2PQ14568 343 aaPredicted RBP15.45■□□□□ 0.06
PDGFD-201ENST00000302251 NUP153P49790 1475 aaKnown RBP15.45■□□□□ 0.06
PDGFD-201ENST00000302251 PLCB2Q00722 1185 aa15.45■□□□□ 0.06
PDGFD-201ENST00000302251 ADAMTS8Q9UP79 889 aa15.45■□□□□ 0.06
PDGFD-201ENST00000302251 RAPGEF6Q8TEU7 1601 aa15.44■□□□□ 0.06
PDGFD-201ENST00000302251 TEX14Q8IWB6 1497 aa15.44■□□□□ 0.06
PDGFD-201ENST00000302251 SAFB2Q14151 953 aaKnown RBP eCLIP15.44■□□□□ 0.06
PDGFD-201ENST00000302251 MORC1Q86VD1 984 aa15.43■□□□□ 0.06
PDGFD-201ENST00000302251 ANKRD30AQ9BXX3 1397 aa15.43■□□□□ 0.06
PDGFD-201ENST00000302251 CDC42BPAQ5VT25 1732 aa15.42■□□□□ 0.06
PDGFD-201ENST00000302251 APBB1O00213 710 aa15.42■□□□□ 0.06
PDGFD-201ENST00000302251 SMG6Q86US8 1419 aaKnown RBP15.42■□□□□ 0.06
PDGFD-201ENST00000302251 C20orf194Q5TEA3 1177 aa15.42■□□□□ 0.06
PDGFD-201ENST00000302251 KIF14Q15058 1648 aa15.41■□□□□ 0.06
PDGFD-201ENST00000302251 CENPJQ9HC77 1338 aaPredicted RBP15.41■□□□□ 0.06
PDGFD-201ENST00000302251 MSNP26038 577 aaKnown RBP15.41■□□□□ 0.06
PDGFD-201ENST00000302251 ITPRIPQ8IWB1 547 aa15.41■□□□□ 0.06
PDGFD-201ENST00000302251 RWDD1Q9H446 243 aaPredicted RBP15.41■□□□□ 0.06
PDGFD-201ENST00000302251 U2AF1L5P0DN76 240 aaPredicted RBP15.4■□□□□ 0.06
PDGFD-201ENST00000302251 U2AF1Q01081 240 aaKnown RBP eCLIP15.4■□□□□ 0.06
PDGFD-201ENST00000302251 PANK1Q8TE04 598 aa15.4■□□□□ 0.06
PDGFD-201ENST00000302251 ADGBQ8N7X0 1667 aa15.4■□□□□ 0.06
PDGFD-201ENST00000302251 SPATA31E1Q6ZUB1 1445 aa15.39■□□□□ 0.05
PDGFD-201ENST00000302251 MIA2Q96PC5 1412 aa15.39■□□□□ 0.05
PDGFD-201ENST00000302251 MAPK8IP3Q9UPT6 1336 aa15.39■□□□□ 0.05
PDGFD-201ENST00000302251 NBPF1Q3BBV0 1214 aa15.38■□□□□ 0.05
PDGFD-201ENST00000302251 MBD5Q9P267 1494 aa15.38■□□□□ 0.05
PDGFD-201ENST00000302251 BCORL1Q5H9F3 1711 aa15.37■□□□□ 0.05
PDGFD-201ENST00000302251 STAG3Q9UJ98 1225 aa15.37■□□□□ 0.05
PDGFD-201ENST00000302251 IFT140Q96RY7 1462 aa15.37■□□□□ 0.05
PDGFD-201ENST00000302251 GRIN2AQ12879 1464 aa15.36■□□□□ 0.05
PDGFD-201ENST00000302251 BCAR3O75815 825 aa15.36■□□□□ 0.05
PDGFD-201ENST00000302251 POGKQ9P215 609 aa15.35■□□□□ 0.05
PDGFD-201ENST00000302251 PMFBP1Q8TBY8 1022 aa15.35■□□□□ 0.05
PDGFD-201ENST00000302251 ABCC5O15440 1437 aa15.35■□□□□ 0.05
PDGFD-201ENST00000302251 KIAA0586Q9BVV6 1533 aa15.34■□□□□ 0.05
PDGFD-201ENST00000302251 SMC4Q9NTJ3 1288 aa15.34■□□□□ 0.05
PDGFD-201ENST00000302251 DAPK1P53355 1430 aa15.34■□□□□ 0.05
PDGFD-201ENST00000302251 PZPP20742 1482 aa15.34■□□□□ 0.05
PDGFD-201ENST00000302251 RPRD2Q5VT52 1461 aaKnown RBP15.34■□□□□ 0.05
PDGFD-201ENST00000302251 GBP4Q96PP9 640 aa15.33■□□□□ 0.05
PDGFD-201ENST00000302251 NCOA1Q15788 1441 aa15.33■□□□□ 0.04
PDGFD-201ENST00000302251 FOXD4L5Q5VV16 416 aaPredicted RBP15.32■□□□□ 0.04
PDGFD-201ENST00000302251 FOXD4L4Q8WXT5 416 aaPredicted RBP15.32■□□□□ 0.04
PDGFD-201ENST00000302251 BRD4O60885 1362 aaPredicted RBP15.32■□□□□ 0.04
PDGFD-201ENST00000302251 ANKRD30BQ9BXX2 1392 aa15.32■□□□□ 0.04
PDGFD-201ENST00000302251 ABCA8O94911 1581 aa15.31■□□□□ 0.04
PDGFD-201ENST00000302251 ROCK1Q13464 1354 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms