RNA–Protein interactions for RNA: ENST00000301904.3

SCARA3-201, Transcript of scavenger receptor class A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARA3, Length 3,510 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARA3-201ENST00000301904 BCAR3O75815 825 aa13.44□□□□□ -0.26
SCARA3-201ENST00000301904 SNAPC4Q5SXM2 1469 aa13.43□□□□□ -0.26
SCARA3-201ENST00000301904 MAPK8IP2Q13387 824 aaPredicted RBP13.43□□□□□ -0.26
SCARA3-201ENST00000301904 USP19O94966 1318 aa13.42□□□□□ -0.26
SCARA3-201ENST00000301904 FBLN2P98095 1184 aa13.42□□□□□ -0.26
SCARA3-201ENST00000301904 MAGI3Q5TCQ9 1506 aa13.41□□□□□ -0.26
SCARA3-201ENST00000301904 MIA2Q96PC5 1412 aa13.41□□□□□ -0.26
SCARA3-201ENST00000301904 PLCD3Q8N3E9 789 aa13.4□□□□□ -0.26
SCARA3-201ENST00000301904 BECN1Q14457 450 aa13.4□□□□□ -0.26
SCARA3-201ENST00000301904 HECW1Q76N89 1606 aa13.4□□□□□ -0.26
SCARA3-201ENST00000301904 PANK3Q9H999 370 aa13.4□□□□□ -0.26
SCARA3-201ENST00000301904 ZHX1Q9UKY1 873 aaPredicted RBP13.39□□□□□ -0.27
SCARA3-201ENST00000301904 CANXP27824 592 aaKnown RBP13.39□□□□□ -0.27
SCARA3-201ENST00000301904 NBPF1Q3BBV0 1214 aa13.38□□□□□ -0.27
SCARA3-201ENST00000301904 TDRD9Q8NDG6 1382 aaKnown RBP13.38□□□□□ -0.27
SCARA3-201ENST00000301904 CDK11BP21127 795 aaKnown RBP13.38□□□□□ -0.27
SCARA3-201ENST00000301904 SPINK5Q9NQ38 1064 aaPredicted RBP13.38□□□□□ -0.27
SCARA3-201ENST00000301904 CADPSQ9ULU8 1353 aa13.38□□□□□ -0.27
SCARA3-201ENST00000301904 DUSP27Q5VZP5 1158 aa13.37□□□□□ -0.27
SCARA3-201ENST00000301904 COG6Q9Y2V7 657 aa13.37□□□□□ -0.27
SCARA3-201ENST00000301904 EFCAB5A4FU69 1503 aa13.37□□□□□ -0.27
SCARA3-201ENST00000301904 ERBB4Q15303 1308 aa13.37□□□□□ -0.27
SCARA3-201ENST00000301904 PANK1Q8TE04 598 aa13.37□□□□□ -0.27
SCARA3-201ENST00000301904 TRIM44Q96DX7 344 aaPredicted RBP13.37□□□□□ -0.27
SCARA3-201ENST00000301904 SUPT6HQ7KZ85 1726 aaKnown RBP13.36□□□□□ -0.27
SCARA3-201ENST00000301904 ROCK2O75116 1388 aaKnown RBP13.36□□□□□ -0.27
SCARA3-201ENST00000301904 WDR43Q15061 677 aaKnown RBP eCLIP13.36□□□□□ -0.27
SCARA3-201ENST00000301904 TBC1D2Q9BYX2 928 aa13.36□□□□□ -0.27
SCARA3-201ENST00000301904 ABCA5Q8WWZ7 1642 aa13.36□□□□□ -0.27
SCARA3-201ENST00000301904 CLCN1P35523 988 aa13.36□□□□□ -0.27
SCARA3-201ENST00000301904 NAP1L2Q9ULW6 460 aaPredicted RBP13.36□□□□□ -0.27
SCARA3-201ENST00000301904 PLEKHH1Q9ULM0 1364 aa13.36□□□□□ -0.27
SCARA3-201ENST00000301904 NESP48681 1621 aa13.35□□□□□ -0.27
SCARA3-201ENST00000301904 UGGT2Q9NYU1 1516 aa13.35□□□□□ -0.27
SCARA3-201ENST00000301904 KLHL34Q8N239 644 aa13.34□□□□□ -0.27
SCARA3-201ENST00000301904 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.34□□□□□ -0.27
SCARA3-201ENST00000301904 CDK13Q14004 1512 aaKnown RBP13.34□□□□□ -0.27
SCARA3-201ENST00000301904 LRRIQ1Q96JM4 1722 aa13.34□□□□□ -0.27
SCARA3-201ENST00000301904 TNNT2P45379 298 aaPredicted RBP13.34□□□□□ -0.27
SCARA3-201ENST00000301904 GOLGA2Q08379 1002 aa13.34□□□□□ -0.27
SCARA3-201ENST00000301904 FAM13BQ9NYF5 915 aa13.34□□□□□ -0.27
SCARA3-201ENST00000301904 TRAK2O60296 914 aa13.34□□□□□ -0.27
SCARA3-201ENST00000301904 PRDM10Q9NQV6 1147 aa13.34□□□□□ -0.27
SCARA3-201ENST00000301904 PER1O15534 1290 aaPredicted RBP13.33□□□□□ -0.28
SCARA3-201ENST00000301904 MCM4P33991 863 aa13.33□□□□□ -0.28
SCARA3-201ENST00000301904 MYH16Q9H6N6 1097 aa13.33□□□□□ -0.28
SCARA3-201ENST00000301904 GRIN2BQ13224 1484 aa13.33□□□□□ -0.28
SCARA3-201ENST00000301904 NEUROD2Q15784 382 aa13.33□□□□□ -0.28
SCARA3-201ENST00000301904 ANTXR1Q9H6X2 564 aa13.33□□□□□ -0.28
SCARA3-201ENST00000301904 FOXD4L1Q9NU39 408 aa13.32□□□□□ -0.28
SCARA3-201ENST00000301904 ESPNB1AK53 854 aa13.32□□□□□ -0.28
SCARA3-201ENST00000301904 ABCC5O15440 1437 aa13.32□□□□□ -0.28
SCARA3-201ENST00000301904 EHBP1L1Q8N3D4 1523 aa13.32□□□□□ -0.28
SCARA3-201ENST00000301904 BCL2L13Q9BXK5 485 aa13.31□□□□□ -0.28
SCARA3-201ENST00000301904 TNNQ9UQP3 1299 aa13.31□□□□□ -0.28
SCARA3-201ENST00000301904 DAPK1P53355 1430 aa13.31□□□□□ -0.28
SCARA3-201ENST00000301904 DMRT2Q9Y5R5 561 aa13.31□□□□□ -0.28
SCARA3-201ENST00000301904 PARD3Q8TEW0 1356 aa13.31□□□□□ -0.28
SCARA3-201ENST00000301904 APAF1O14727 1248 aa13.31□□□□□ -0.28
SCARA3-201ENST00000301904 CLUAP1Q96AJ1 413 aa13.31□□□□□ -0.28
SCARA3-201ENST00000301904 ZBTB7CA1YPR0 619 aa13.3□□□□□ -0.28
SCARA3-201ENST00000301904 MFAP1P55081 439 aaKnown RBP13.3□□□□□ -0.28
SCARA3-201ENST00000301904 UPF2Q9HAU5 1272 aaKnown RBP13.3□□□□□ -0.28
SCARA3-201ENST00000301904 GCC2Q8IWJ2 1684 aa13.3□□□□□ -0.28
SCARA3-201ENST00000301904 TAF7LQ5H9L4 462 aa13.3□□□□□ -0.28
SCARA3-201ENST00000301904 GRPEL1Q9HAV7 217 aa13.29□□□□□ -0.28
SCARA3-201ENST00000301904 PZPP20742 1482 aa13.29□□□□□ -0.28
SCARA3-201ENST00000301904 KDM5CP41229 1560 aa13.29□□□□□ -0.28
SCARA3-201ENST00000301904 CFDP1Q9UEE9 299 aaPredicted RBP13.29□□□□□ -0.28
SCARA3-201ENST00000301904 NUP155O75694 1391 aa13.29□□□□□ -0.28
SCARA3-201ENST00000301904 FSD2A1L4K1 749 aa13.28□□□□□ -0.28
SCARA3-201ENST00000301904 ANP32BQ92688 251 aaKnown RBP13.28□□□□□ -0.28
SCARA3-201ENST00000301904 VGLL3A8MV65 326 aa13.28□□□□□ -0.28
SCARA3-201ENST00000301904 TCOF1Q13428 1488 aaKnown RBP13.28□□□□□ -0.28
SCARA3-201ENST00000301904 ERCC6Q03468 1493 aa13.27□□□□□ -0.28
SCARA3-201ENST00000301904 KIAA1107Q9UPP5 1409 aa13.27□□□□□ -0.29
SCARA3-201ENST00000301904 GAS2L3Q86XJ1 694 aa13.26□□□□□ -0.29
SCARA3-201ENST00000301904 DISP3Q9P2K9 1392 aa13.26□□□□□ -0.29
SCARA3-201ENST00000301904 SLFN5Q08AF3 891 aa13.26□□□□□ -0.29
SCARA3-201ENST00000301904 KIAA1211Q6ZU35 1233 aa13.26□□□□□ -0.29
SCARA3-201ENST00000301904 POLR1AO95602 1720 aaPredicted RBP13.26□□□□□ -0.29
SCARA3-201ENST00000301904 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.25□□□□□ -0.29
SCARA3-201ENST00000301904 MRE11P49959 708 aa13.25□□□□□ -0.29
SCARA3-201ENST00000301904 RRP7AQ9Y3A4 280 aaKnown RBP13.25□□□□□ -0.29
SCARA3-201ENST00000301904 PPP2R1AP30153 589 aa13.24□□□□□ -0.29
SCARA3-201ENST00000301904 PDZRN3Q9UPQ7 1066 aa13.24□□□□□ -0.29
SCARA3-201ENST00000301904 MBD5Q9P267 1494 aa13.24□□□□□ -0.29
SCARA3-201ENST00000301904 TBC1D32Q96NH3 1257 aa13.23□□□□□ -0.29
SCARA3-201ENST00000301904 PCDHB15Q9Y5E8 787 aa13.23□□□□□ -0.29
SCARA3-201ENST00000301904 HMGXB3Q12766 1538 aa13.23□□□□□ -0.29
SCARA3-201ENST00000301904 KNSTRNQ9Y448 316 aa13.23□□□□□ -0.29
SCARA3-201ENST00000301904 FANCD2Q9BXW9 1451 aa13.23□□□□□ -0.29
SCARA3-201ENST00000301904 POLA1P09884 1462 aaPredicted RBP13.22□□□□□ -0.29
SCARA3-201ENST00000301904 NCLP19338 710 aaKnown RBP13.22□□□□□ -0.29
SCARA3-201ENST00000301904 BLMP54132 1417 aaPredicted RBP13.22□□□□□ -0.29
SCARA3-201ENST00000301904 DHX37Q8IY37 1157 aaKnown RBP13.22□□□□□ -0.29
SCARA3-201ENST00000301904 THOC2Q8NI27 1593 aaKnown RBP13.22□□□□□ -0.29
SCARA3-201ENST00000301904 EPRSP07814 1512 aaKnown RBP13.22□□□□□ -0.29
SCARA3-201ENST00000301904 ARHGEF11O15085 1522 aa13.21□□□□□ -0.29
SCARA3-201ENST00000301904 CHMP5Q9NZZ3 219 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms