RNA–Protein interactions for RNA: ENST00000300107.7

CLPX-201, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPX, Length 4,695 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-201ENST00000300107 DDX49Q9Y6V7 483 aaKnown RBP15.99■□□□□ 0.15
CLPX-201ENST00000300107 HMMRO75330 724 aa15.98■□□□□ 0.15
CLPX-201ENST00000300107 ST18O60284 1047 aa15.98■□□□□ 0.15
CLPX-201ENST00000300107 SKOR2Q2VWA4 1001 aaPredicted RBP15.98■□□□□ 0.15
CLPX-201ENST00000300107 WIZO95785 1651 aa15.98■□□□□ 0.15
CLPX-201ENST00000300107 EIF3AQ14152 1382 aaKnown RBP15.97■□□□□ 0.15
CLPX-201ENST00000300107 PANK3Q9H999 370 aa15.97■□□□□ 0.15
CLPX-201ENST00000300107 PHF14O94880 888 aa15.96■□□□□ 0.15
CLPX-201ENST00000300107 E9PSI1 815 aa15.95■□□□□ 0.14
CLPX-201ENST00000300107 CSPP1Q1MSJ5 1256 aa15.95■□□□□ 0.14
CLPX-201ENST00000300107 NPHP1O15259 732 aa15.95■□□□□ 0.14
CLPX-201ENST00000300107 PAK3O75914 559 aaPredicted RBP15.95■□□□□ 0.14
CLPX-201ENST00000300107 TRIM6-TRIM34B2RNG4 842 aa15.94■□□□□ 0.14
CLPX-201ENST00000300107 GNL2Q13823 731 aaKnown RBP15.94■□□□□ 0.14
CLPX-201ENST00000300107 COG6Q9Y2V7 657 aa15.94■□□□□ 0.14
CLPX-201ENST00000300107 STK31Q9BXU1 1019 aa15.93■□□□□ 0.14
CLPX-201ENST00000300107 ATAD2BQ9ULI0 1458 aa15.92■□□□□ 0.14
CLPX-201ENST00000300107 SPAG9O60271 1321 aaKnown RBP15.92■□□□□ 0.14
CLPX-201ENST00000300107 TNNT3P45378 269 aaPredicted RBP15.92■□□□□ 0.14
CLPX-201ENST00000300107 USP47Q96K76 1375 aa15.92■□□□□ 0.14
CLPX-201ENST00000300107 BCL2L13Q9BXK5 485 aa15.92■□□□□ 0.14
CLPX-201ENST00000300107 RUSC2Q8N2Y8 1516 aa15.92■□□□□ 0.14
CLPX-201ENST00000300107 NOL8Q76FK4 1167 aaKnown RBP15.91■□□□□ 0.14
CLPX-201ENST00000300107 RRP7AQ9Y3A4 280 aaKnown RBP15.91■□□□□ 0.14
CLPX-201ENST00000300107 CHMP5Q9NZZ3 219 aa15.91■□□□□ 0.14
CLPX-201ENST00000300107 TULP1O00294 542 aaPredicted RBP15.91■□□□□ 0.14
CLPX-201ENST00000300107 NFKBIBQ15653 356 aa15.91■□□□□ 0.14
CLPX-201ENST00000300107 ZKSCAN2Q63HK3 967 aa15.91■□□□□ 0.14
CLPX-201ENST00000300107 CHMP4AQ9BY43 222 aa15.91■□□□□ 0.14
CLPX-201ENST00000300107 TERF2IPQ9NYB0 399 aa15.9■□□□□ 0.14
CLPX-201ENST00000300107 TOP2AP11388 1531 aaKnown RBP15.9■□□□□ 0.14
CLPX-201ENST00000300107 WASHC2CQ9Y4E1 1318 aa15.9■□□□□ 0.14
CLPX-201ENST00000300107 NUTM2FA1L443 756 aa15.89■□□□□ 0.14
CLPX-201ENST00000300107 TPM4P67936 248 aa15.89■□□□□ 0.14
CLPX-201ENST00000300107 RSPH4AQ5TD94 716 aa15.89■□□□□ 0.13
CLPX-201ENST00000300107 APAF1O14727 1248 aa15.89■□□□□ 0.13
CLPX-201ENST00000300107 FOXD4L5Q5VV16 416 aaPredicted RBP15.89■□□□□ 0.13
CLPX-201ENST00000300107 FOXD4L4Q8WXT5 416 aaPredicted RBP15.89■□□□□ 0.13
CLPX-201ENST00000300107 CCDC18Q5T9S5 1454 aa15.88■□□□□ 0.13
CLPX-201ENST00000300107 ANKRD45Q5TZF3 282 aa15.88■□□□□ 0.13
CLPX-201ENST00000300107 CYB5RLQ6IPT4 315 aa15.88■□□□□ 0.13
CLPX-201ENST00000300107 LMOD3Q0VAK6 560 aa15.87■□□□□ 0.13
CLPX-201ENST00000300107 SLC4A10Q6U841 1118 aa15.87■□□□□ 0.13
CLPX-201ENST00000300107 NGEFQ8N5V2 710 aa15.87■□□□□ 0.13
CLPX-201ENST00000300107 HDAC5Q9UQL6 1122 aa15.86■□□□□ 0.13
CLPX-201ENST00000300107 CCDC7Q96M83 1385 aa15.86■□□□□ 0.13
CLPX-201ENST00000300107 GPATCH3Q96I76 525 aa15.85■□□□□ 0.13
CLPX-201ENST00000300107 KIF16BQ96L93 1317 aa15.85■□□□□ 0.13
CLPX-201ENST00000300107 KIF7Q2M1P5 1343 aa15.84■□□□□ 0.13
CLPX-201ENST00000300107 ATP6V1DQ9Y5K8 247 aa15.83■□□□□ 0.12
CLPX-201ENST00000300107 CCDC144AA2RUR9 1427 aa15.83■□□□□ 0.12
CLPX-201ENST00000300107 TRAK1Q9UPV9 953 aa15.83■□□□□ 0.12
CLPX-201ENST00000300107 CSB-PGBD3P0DP91 1061 aa15.83■□□□□ 0.12
CLPX-201ENST00000300107 FAM43AQ8N2R8 423 aa15.83■□□□□ 0.12
CLPX-201ENST00000300107 CCDC34Q96HJ3 373 aa15.82■□□□□ 0.12
CLPX-201ENST00000300107 DDX19BQ9UMR2 479 aa15.82■□□□□ 0.12
CLPX-201ENST00000300107 ZNF330Q9Y3S2 320 aaPredicted RBP15.82■□□□□ 0.12
CLPX-201ENST00000300107 CNTLNQ9NXG0 1405 aa15.81■□□□□ 0.12
CLPX-201ENST00000300107 HSP90B1P14625 803 aaKnown RBP15.81■□□□□ 0.12
CLPX-201ENST00000300107 ELL2O00472 640 aaPredicted RBP15.8■□□□□ 0.12
CLPX-201ENST00000300107 FAM13BQ9NYF5 915 aa15.8■□□□□ 0.12
CLPX-201ENST00000300107 FANCD2Q9BXW9 1451 aa15.8■□□□□ 0.12
CLPX-201ENST00000300107 KIF3AQ9Y496 699 aa15.8■□□□□ 0.12
CLPX-201ENST00000300107 GOLGA6L1Q8N7Z2 621 aa15.79■□□□□ 0.12
CLPX-201ENST00000300107 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.79■□□□□ 0.12
CLPX-201ENST00000300107 DZIP1LQ8IYY4 767 aaKnown RBP15.79■□□□□ 0.12
CLPX-201ENST00000300107 WASHC2AQ641Q2 1341 aa15.79■□□□□ 0.12
CLPX-201ENST00000300107 REC8O95072 547 aa15.79■□□□□ 0.12
CLPX-201ENST00000300107 FOXD4L6Q3SYB3 417 aaPredicted RBP15.79■□□□□ 0.12
CLPX-201ENST00000300107 FOXD4L3Q6VB84 417 aaPredicted RBP15.79■□□□□ 0.12
CLPX-201ENST00000300107 MRE11P49959 708 aa15.78■□□□□ 0.12
CLPX-201ENST00000300107 PTPRGP23470 1445 aa15.78■□□□□ 0.12
CLPX-201ENST00000300107 NGDNQ8NEJ9 315 aaKnown RBP15.77■□□□□ 0.12
CLPX-201ENST00000300107 RILPL2Q969X0 211 aa15.77■□□□□ 0.12
CLPX-201ENST00000300107 C22orf23Q9BZE7 217 aa15.77■□□□□ 0.11
CLPX-201ENST00000300107 EID1Q9Y6B2 187 aa15.77■□□□□ 0.11
CLPX-201ENST00000300107 SF3A1Q15459 793 aaKnown RBP15.76■□□□□ 0.11
CLPX-201ENST00000300107 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.76■□□□□ 0.11
CLPX-201ENST00000300107 GOLGA6L19H0YKK7 550 aa15.76■□□□□ 0.11
CLPX-201ENST00000300107 NUCB2P80303 420 aa15.76■□□□□ 0.11
CLPX-201ENST00000300107 AAMPQ13685 434 aa15.76■□□□□ 0.11
CLPX-201ENST00000300107 BRPF3Q9ULD4 1205 aa15.75■□□□□ 0.11
CLPX-201ENST00000300107 UACAQ9BZF9 1416 aa15.75■□□□□ 0.11
CLPX-201ENST00000300107 BECN2A8MW95 431 aa15.75■□□□□ 0.11
CLPX-201ENST00000300107 LTV1Q96GA3 475 aaPredicted RBP15.75■□□□□ 0.11
CLPX-201ENST00000300107 GORABQ5T7V8 394 aa15.75■□□□□ 0.11
CLPX-201ENST00000300107 IL27Q8NEV9 243 aa15.73■□□□□ 0.11
CLPX-201ENST00000300107 BRD4O60885 1362 aaPredicted RBP15.73■□□□□ 0.11
CLPX-201ENST00000300107 FRAT2O75474 233 aaPredicted RBP15.72■□□□□ 0.11
CLPX-201ENST00000300107 OSCARQ8IYS5 282 aa15.72■□□□□ 0.11
CLPX-201ENST00000300107 SMARCA4P51532 1647 aa15.72■□□□□ 0.11
CLPX-201ENST00000300107 H3BQV1 296 aa15.71■□□□□ 0.11
CLPX-201ENST00000300107 IFFO2Q5TF58 517 aa15.71■□□□□ 0.11
CLPX-201ENST00000300107 TPM3P06753 285 aa15.71■□□□□ 0.11
CLPX-201ENST00000300107 API5Q9BZZ5 524 aaKnown RBP15.7■□□□□ 0.1
CLPX-201ENST00000300107 LNPKQ9C0E8 428 aa15.7■□□□□ 0.1
CLPX-201ENST00000300107 TRAK2O60296 914 aa15.7■□□□□ 0.1
CLPX-201ENST00000300107 ZNF771Q7L3S4 317 aaPredicted RBP15.7■□□□□ 0.1
CLPX-201ENST00000300107 NOC3LQ8WTT2 800 aaKnown RBP15.7■□□□□ 0.1
CLPX-201ENST00000300107 BACH2Q9BYV9 841 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms