RNA–Protein interactions for RNA: ENST00000299565.9

CHRNA5-201, Transcript of cholinergic receptor nicotinic alpha 5 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA5, Length 3,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5-201ENST00000299565 RRP7AQ9Y3A4 280 aaKnown RBP22.65■■□□□ 1.22
CHRNA5-201ENST00000299565 LAMC3Q9Y6N6 1575 aa22.65■■□□□ 1.22
CHRNA5-201ENST00000299565 BRD4O60885 1362 aaPredicted RBP22.64■■□□□ 1.22
CHRNA5-201ENST00000299565 APAF1O14727 1248 aa22.64■■□□□ 1.22
CHRNA5-201ENST00000299565 PDE3BQ13370 1112 aa22.64■■□□□ 1.21
CHRNA5-201ENST00000299565 GOLGA2Q08379 1002 aa22.63■■□□□ 1.21
CHRNA5-201ENST00000299565 DDRGK1Q96HY6 314 aa22.62■■□□□ 1.21
CHRNA5-201ENST00000299565 ARHGEF11O15085 1522 aa22.62■■□□□ 1.21
CHRNA5-201ENST00000299565 NUP153P49790 1475 aaKnown RBP22.62■■□□□ 1.21
CHRNA5-201ENST00000299565 PPM1GO15355 546 aaPredicted RBP22.62■■□□□ 1.21
CHRNA5-201ENST00000299565 PTPRGP23470 1445 aa22.62■■□□□ 1.21
CHRNA5-201ENST00000299565 NUTM2DQ5VT03 806 aaPredicted RBP22.62■■□□□ 1.21
CHRNA5-201ENST00000299565 BCL2L13Q9BXK5 485 aa22.62■■□□□ 1.21
CHRNA5-201ENST00000299565 TCOF1Q13428 1488 aaKnown RBP22.61■■□□□ 1.21
CHRNA5-201ENST00000299565 CLUAP1Q96AJ1 413 aa22.61■■□□□ 1.21
CHRNA5-201ENST00000299565 SPRYD3Q8NCJ5 442 aa22.61■■□□□ 1.21
CHRNA5-201ENST00000299565 KIAA0586Q9BVV6 1533 aa22.6■■□□□ 1.21
CHRNA5-201ENST00000299565 ARID4BQ4LE39 1312 aaPredicted RBP22.6■■□□□ 1.21
CHRNA5-201ENST00000299565 TEX14Q8IWB6 1497 aa22.59■■□□□ 1.21
CHRNA5-201ENST00000299565 KIF3BO15066 747 aa22.58■■□□□ 1.2
CHRNA5-201ENST00000299565 IL27Q8NEV9 243 aa22.57■■□□□ 1.2
CHRNA5-201ENST00000299565 CDCA8Q53HL2 280 aa22.57■■□□□ 1.2
CHRNA5-201ENST00000299565 SAMD9Q5K651 1589 aa22.57■■□□□ 1.2
CHRNA5-201ENST00000299565 GPATCH8Q9UKJ3 1502 aaKnown RBP22.57■■□□□ 1.2
CHRNA5-201ENST00000299565 KDM5BQ9UGL1 1544 aa22.56■■□□□ 1.2
CHRNA5-201ENST00000299565 BACH2Q9BYV9 841 aa22.56■■□□□ 1.2
CHRNA5-201ENST00000299565 SLKQ9H2G2 1235 aaPredicted RBP22.56■■□□□ 1.2
CHRNA5-201ENST00000299565 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.56■■□□□ 1.2
CHRNA5-201ENST00000299565 SPATA31E1Q6ZUB1 1445 aa22.55■■□□□ 1.2
CHRNA5-201ENST00000299565 AFAP1Q8N556 730 aa22.55■■□□□ 1.2
CHRNA5-201ENST00000299565 MRC2Q9UBG0 1479 aa22.55■■□□□ 1.2
CHRNA5-201ENST00000299565 PZPP20742 1482 aa22.54■■□□□ 1.2
CHRNA5-201ENST00000299565 EFCAB2Q5VUJ9 269 aa22.52■■□□□ 1.2
CHRNA5-201ENST00000299565 COG6Q9Y2V7 657 aa22.52■■□□□ 1.2
CHRNA5-201ENST00000299565 TRAK1Q9UPV9 953 aa22.51■■□□□ 1.19
CHRNA5-201ENST00000299565 BCAR3O75815 825 aa22.51■■□□□ 1.19
CHRNA5-201ENST00000299565 WDR62O43379 1518 aa22.5■■□□□ 1.19
CHRNA5-201ENST00000299565 GGT6Q6P531 493 aa22.5■■□□□ 1.19
CHRNA5-201ENST00000299565 PPP2R1AP30153 589 aa22.5■■□□□ 1.19
CHRNA5-201ENST00000299565 MORC1Q86VD1 984 aa22.49■■□□□ 1.19
CHRNA5-201ENST00000299565 UPF2Q9HAU5 1272 aaKnown RBP22.49■■□□□ 1.19
CHRNA5-201ENST00000299565 ABCA5Q8WWZ7 1642 aa22.48■■□□□ 1.19
CHRNA5-201ENST00000299565 DISP3Q9P2K9 1392 aa22.48■■□□□ 1.19
CHRNA5-201ENST00000299565 U2SURPO15042 1029 aaKnown RBP22.48■■□□□ 1.19
CHRNA5-201ENST00000299565 GRIN2AQ12879 1464 aa22.47■■□□□ 1.19
CHRNA5-201ENST00000299565 SPAG9O60271 1321 aaKnown RBP22.47■■□□□ 1.19
CHRNA5-201ENST00000299565 RSPH4AQ5TD94 716 aa22.46■■□□□ 1.19
CHRNA5-201ENST00000299565 CFAP70Q5T0N1 1121 aa22.46■■□□□ 1.19
CHRNA5-201ENST00000299565 PANK1Q8TE04 598 aa22.45■■□□□ 1.18
CHRNA5-201ENST00000299565 IFT140Q96RY7 1462 aa22.45■■□□□ 1.18
CHRNA5-201ENST00000299565 MS4A1P11836 297 aa22.44■■□□□ 1.18
CHRNA5-201ENST00000299565 KIF21AQ7Z4S6 1674 aa22.43■■□□□ 1.18
CHRNA5-201ENST00000299565 STK26Q9P289 416 aa22.43■■□□□ 1.18
CHRNA5-201ENST00000299565 LRRIQ1Q96JM4 1722 aa22.43■■□□□ 1.18
CHRNA5-201ENST00000299565 CENPQQ7L2Z9 268 aaPredicted RBP22.42■■□□□ 1.18
CHRNA5-201ENST00000299565 DISP1Q96F81 1524 aa22.42■■□□□ 1.18
CHRNA5-201ENST00000299565 FAM161AQ3B820 660 aa22.41■■□□□ 1.18
CHRNA5-201ENST00000299565 PER1O15534 1290 aaPredicted RBP22.4■■□□□ 1.18
CHRNA5-201ENST00000299565 FTSJ3Q8IY81 847 aaKnown RBP22.4■■□□□ 1.18
CHRNA5-201ENST00000299565 MAGI1Q96QZ7 1491 aaPredicted RBP22.4■■□□□ 1.18
CHRNA5-201ENST00000299565 U2AF1L5P0DN76 240 aaPredicted RBP22.4■■□□□ 1.18
CHRNA5-201ENST00000299565 U2AF1Q01081 240 aaKnown RBP eCLIP22.4■■□□□ 1.18
CHRNA5-201ENST00000299565 NFKBIBQ15653 356 aa22.4■■□□□ 1.18
CHRNA5-201ENST00000299565 BRPF3Q9ULD4 1205 aa22.38■■□□□ 1.17
CHRNA5-201ENST00000299565 TMEM132EQ6IEE7 984 aa22.37■■□□□ 1.17
CHRNA5-201ENST00000299565 TESK2Q96S53 571 aa22.37■■□□□ 1.17
CHRNA5-201ENST00000299565 ERBINQ96RT1 1412 aa22.37■■□□□ 1.17
CHRNA5-201ENST00000299565 GCC2Q8IWJ2 1684 aa22.37■■□□□ 1.17
CHRNA5-201ENST00000299565 CENPJQ9HC77 1338 aaPredicted RBP22.36■■□□□ 1.17
CHRNA5-201ENST00000299565 RAPGEF6Q8TEU7 1601 aa22.36■■□□□ 1.17
CHRNA5-201ENST00000299565 RNF123Q5XPI4 1314 aa22.35■■□□□ 1.17
CHRNA5-201ENST00000299565 ARHGAP5Q13017 1502 aa22.35■■□□□ 1.17
CHRNA5-201ENST00000299565 DNMT1P26358 1616 aaKnown RBP22.35■■□□□ 1.17
CHRNA5-201ENST00000299565 GZF1Q9H116 711 aaPredicted RBP22.35■■□□□ 1.17
CHRNA5-201ENST00000299565 ADAMTS12P58397 1594 aa22.34■■□□□ 1.17
CHRNA5-201ENST00000299565 ANO8Q9HCE9 1232 aaPredicted RBP22.34■■□□□ 1.17
CHRNA5-201ENST00000299565 FRAT2O75474 233 aaPredicted RBP22.34■■□□□ 1.17
CHRNA5-201ENST00000299565 BECN1Q14457 450 aa22.33■■□□□ 1.17
CHRNA5-201ENST00000299565 CFAP53Q96M91 514 aa22.33■■□□□ 1.17
CHRNA5-201ENST00000299565 STAG3Q9UJ98 1225 aa22.33■■□□□ 1.17
CHRNA5-201ENST00000299565 ATP10BO94823 1461 aa22.33■■□□□ 1.16
CHRNA5-201ENST00000299565 HSP90AA1P07900 732 aaKnown RBP22.33■■□□□ 1.16
CHRNA5-201ENST00000299565 GSE1Q14687 1217 aa22.32■■□□□ 1.16
CHRNA5-201ENST00000299565 RALGAPBQ86X10 1494 aa22.32■■□□□ 1.16
CHRNA5-201ENST00000299565 PLEKHH2Q8IVE3 1493 aa22.32■■□□□ 1.16
CHRNA5-201ENST00000299565 KIAA0556O60303 1618 aa22.32■■□□□ 1.16
CHRNA5-201ENST00000299565 KIF14Q15058 1648 aa22.32■■□□□ 1.16
CHRNA5-201ENST00000299565 NPM1P06748 294 aaKnown RBP eCLIP22.32■■□□□ 1.16
CHRNA5-201ENST00000299565 DUSP27Q5VZP5 1158 aa22.32■■□□□ 1.16
CHRNA5-201ENST00000299565 SYNJ2O15056 1496 aa22.31■■□□□ 1.16
CHRNA5-201ENST00000299565 SLC12A5Q9H2X9 1139 aa22.3■■□□□ 1.16
CHRNA5-201ENST00000299565 SRPK2P78362 688 aaKnown RBP22.3■■□□□ 1.16
CHRNA5-201ENST00000299565 LRPPRCP42704 1394 aaKnown RBP22.3■■□□□ 1.16
CHRNA5-201ENST00000299565 SPINK5Q9NQ38 1064 aaPredicted RBP22.29■■□□□ 1.16
CHRNA5-201ENST00000299565 TARBP1Q13395 1621 aaKnown RBP22.28■■□□□ 1.16
CHRNA5-201ENST00000299565 PARD3Q8TEW0 1356 aa22.28■■□□□ 1.16
CHRNA5-201ENST00000299565 E9PSI1 815 aa22.28■■□□□ 1.16
CHRNA5-201ENST00000299565 KANK1Q14678 1352 aa22.28■■□□□ 1.16
CHRNA5-201ENST00000299565 BCORL1Q5H9F3 1711 aa22.27■■□□□ 1.16
CHRNA5-201ENST00000299565 USP35Q9P2H5 1018 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms