RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 KIF3BO15066 747 aa36.35■■■■□ 3.41
SDCCAG3-201ENST00000298537 RAPGEF3O95398 923 aa36.35■■■■□ 3.41
SDCCAG3-201ENST00000298537 CFAP74Q9C0B2 1584 aa36.33■■■■□ 3.41
SDCCAG3-201ENST00000298537 DHX29Q7Z478 1369 aaKnown RBP36.33■■■■□ 3.41
SDCCAG3-201ENST00000298537 KDM2AQ9Y2K7 1162 aa36.3■■■■□ 3.4
SDCCAG3-201ENST00000298537 CCDC144AA2RUR9 1427 aa36.29■■■■□ 3.4
SDCCAG3-201ENST00000298537 MAP3K4Q9Y6R4 1608 aa36.29■■■■□ 3.4
SDCCAG3-201ENST00000298537 KDM5CP41229 1560 aa36.29■■■■□ 3.4
SDCCAG3-201ENST00000298537 FAM69CQ0P6D2 419 aa36.29■■■■□ 3.4
SDCCAG3-201ENST00000298537 EIF4G2P78344 907 aaKnown RBP eCLIP36.28■■■■□ 3.4
SDCCAG3-201ENST00000298537 DEPDC5O75140 1603 aa36.27■■■■□ 3.4
SDCCAG3-201ENST00000298537 NEO1Q92859 1461 aa36.26■■■■□ 3.39
SDCCAG3-201ENST00000298537 RGL3Q3MIN7 710 aa36.25■■■■□ 3.39
SDCCAG3-201ENST00000298537 DCAF11Q8TEB1 546 aa36.25■■■■□ 3.39
SDCCAG3-201ENST00000298537 YTHDC1Q96MU7 727 aaKnown RBP36.25■■■■□ 3.39
SDCCAG3-201ENST00000298537 E9PCH4 1651 aa36.22■■■■□ 3.39
SDCCAG3-201ENST00000298537 MROH1Q8NDA8 1641 aa36.21■■■■□ 3.39
SDCCAG3-201ENST00000298537 MLH3Q9UHC1 1453 aa36.2■■■■□ 3.39
SDCCAG3-201ENST00000298537 GLI2P10070 1586 aa36.2■■■■□ 3.39
SDCCAG3-201ENST00000298537 DIP2BQ9P265 1576 aa36.2■■■■□ 3.39
SDCCAG3-201ENST00000298537 A2MP01023 1474 aa36.19■■■■□ 3.38
SDCCAG3-201ENST00000298537 HECW2Q9P2P5 1572 aa36.18■■■■□ 3.38
SDCCAG3-201ENST00000298537 C11orf95C9JLR9 678 aaPredicted RBP36.18■■■■□ 3.38
SDCCAG3-201ENST00000298537 FRMPD1Q5SYB0 1578 aa36.18■■■■□ 3.38
SDCCAG3-201ENST00000298537 WASHC2AQ641Q2 1341 aa36.17■■■■□ 3.38
SDCCAG3-201ENST00000298537 VWDEQ8N2E2 1590 aa36.16■■■■□ 3.38
SDCCAG3-201ENST00000298537 ABCA6Q8N139 1617 aa36.15■■■■□ 3.38
SDCCAG3-201ENST00000298537 EIF2AK4Q9P2K8 1649 aaKnown RBP36.15■■■■□ 3.38
SDCCAG3-201ENST00000298537 UHRF1BP1Q6BDS2 1440 aa36.15■■■■□ 3.38
SDCCAG3-201ENST00000298537 ATP10AO60312 1499 aa36.14■■■■□ 3.38
SDCCAG3-201ENST00000298537 SPATA31E1Q6ZUB1 1445 aa36.14■■■■□ 3.38
SDCCAG3-201ENST00000298537 PRDM15P57071 1507 aaPredicted RBP36.13■■■■□ 3.37
SDCCAG3-201ENST00000298537 KANK1Q14678 1352 aa36.11■■■■□ 3.37
SDCCAG3-201ENST00000298537 TSPOAP1O95153 1857 aa36.1■■■■□ 3.37
SDCCAG3-201ENST00000298537 TET3O43151 1660 aa36.08■■■■□ 3.37
SDCCAG3-201ENST00000298537 RICTORQ6R327 1708 aa36.08■■■■□ 3.37
SDCCAG3-201ENST00000298537 GGT6Q6P531 493 aa36.06■■■■□ 3.36
SDCCAG3-201ENST00000298537 YEATS2Q9ULM3 1422 aa36.05■■■■□ 3.36
SDCCAG3-201ENST00000298537 RALGAPBQ86X10 1494 aa36.04■■■■□ 3.36
SDCCAG3-201ENST00000298537 USP47Q96K76 1375 aa36.03■■■■□ 3.36
SDCCAG3-201ENST00000298537 PTPRTO14522 1441 aa36.02■■■■□ 3.36
SDCCAG3-201ENST00000298537 PPRC1Q5VV67 1664 aaKnown RBP36.02■■■■□ 3.36
SDCCAG3-201ENST00000298537 DIP2CQ9Y2E4 1556 aa36.01■■■■□ 3.35
SDCCAG3-201ENST00000298537 SPHKAPQ2M3C7 1700 aa36.01■■■■□ 3.35
SDCCAG3-201ENST00000298537 TRPM2O94759 1503 aa36.01■■■■□ 3.35
SDCCAG3-201ENST00000298537 PRAG1Q86YV5 1406 aa36■■■■□ 3.35
SDCCAG3-201ENST00000298537 CARD11Q9BXL7 1154 aa35.99■■■■□ 3.35
SDCCAG3-201ENST00000298537 CEP152O94986 1710 aa35.99■■■■□ 3.35
SDCCAG3-201ENST00000298537 RNF17Q9BXT8 1623 aaKnown RBP35.98■■■■□ 3.35
SDCCAG3-201ENST00000298537 CLTCL1P53675 1640 aa35.98■■■■□ 3.35
SDCCAG3-201ENST00000298537 UGGT1Q9NYU2 1555 aa35.96■■■■□ 3.35
SDCCAG3-201ENST00000298537 CCDC7Q96M83 1385 aa35.96■■■■□ 3.35
SDCCAG3-201ENST00000298537 NBPF1Q3BBV0 1214 aa35.95■■■■□ 3.35
SDCCAG3-201ENST00000298537 EFCAB6Q5THR3 1501 aa35.94■■■■□ 3.34
SDCCAG3-201ENST00000298537 KIF7Q2M1P5 1343 aa35.92■■■■□ 3.34
SDCCAG3-201ENST00000298537 ROCK2O75116 1388 aaKnown RBP35.91■■■■□ 3.34
SDCCAG3-201ENST00000298537 BCORL1Q5H9F3 1711 aa35.9■■■■□ 3.34
SDCCAG3-201ENST00000298537 TRPM1Q7Z4N2 1603 aa35.88■■■■□ 3.33
SDCCAG3-201ENST00000298537 LMTK2Q8IWU2 1503 aa35.88■■■■□ 3.33
SDCCAG3-201ENST00000298537 KIF13AQ9H1H9 1805 aa35.87■■■■□ 3.33
SDCCAG3-201ENST00000298537 WASHC2CQ9Y4E1 1318 aa35.85■■■■□ 3.33
SDCCAG3-201ENST00000298537 NPATQ14207 1427 aa35.84■■■■□ 3.33
SDCCAG3-201ENST00000298537 ST20-MTHFSA0A0A6YYL1 179 aa35.84■■■■□ 3.33
SDCCAG3-201ENST00000298537 ANP32CO43423 234 aa35.84■■■■□ 3.33
SDCCAG3-201ENST00000298537 CENPBP07199 599 aaPredicted RBP35.83■■■■□ 3.33
SDCCAG3-201ENST00000298537 CFAP65Q6ZU64 1925 aaKnown RBP35.83■■■■□ 3.33
SDCCAG3-201ENST00000298537 ABCC3O15438 1527 aa35.81■■■■□ 3.32
SDCCAG3-201ENST00000298537 COL17A1Q9UMD9 1497 aaPredicted RBP35.8■■■■□ 3.32
SDCCAG3-201ENST00000298537 POLR3GLQ9BT43 218 aa35.79■■■■□ 3.32
SDCCAG3-201ENST00000298537 ZMYM4Q5VZL5 1548 aa35.78■■■■□ 3.32
SDCCAG3-201ENST00000298537 CNTLNQ9NXG0 1405 aa35.77■■■■□ 3.32
SDCCAG3-201ENST00000298537 POLR1AO95602 1720 aaPredicted RBP35.73■■■■□ 3.31
SDCCAG3-201ENST00000298537 GPRASP1Q5JY77 1395 aa35.72■■■■□ 3.31
SDCCAG3-201ENST00000298537 MADDQ8WXG6 1647 aa35.7■■■■□ 3.31
SDCCAG3-201ENST00000298537 CAMSAP1Q5T5Y3 1602 aa35.69■■■■□ 3.3
SDCCAG3-201ENST00000298537 MROH2AA6NES4 1674 aa35.68■■■■□ 3.3
SDCCAG3-201ENST00000298537 SIGLEC1Q9BZZ2 1709 aa35.68■■■■□ 3.3
SDCCAG3-201ENST00000298537 CHGAP10645 457 aaKnown RBP35.67■■■■□ 3.3
SDCCAG3-201ENST00000298537 SCAF1Q9H7N4 1312 aaKnown RBP35.65■■■■□ 3.3
SDCCAG3-201ENST00000298537 KIF1BO60333 1816 aa35.62■■■■□ 3.29
SDCCAG3-201ENST00000298537 ADGRF5Q8IZF2 1346 aa35.61■■■■□ 3.29
SDCCAG3-201ENST00000298537 CCER2I3L3R5 266 aa35.6■■■■□ 3.29
SDCCAG3-201ENST00000298537 NOS1P29475 1434 aa35.57■■■■□ 3.29
SDCCAG3-201ENST00000298537 LAMC1P11047 1609 aa35.57■■■■□ 3.28
SDCCAG3-201ENST00000298537 ADGRB3O60242 1522 aa35.56■■■■□ 3.28
SDCCAG3-201ENST00000298537 NEURL4Q96JN8 1562 aa35.56■■■■□ 3.28
SDCCAG3-201ENST00000298537 SYNMO15061 1565 aa35.55■■■■□ 3.28
SDCCAG3-201ENST00000298537 CNGB1Q14028 1251 aaPredicted RBP35.54■■■■□ 3.28
SDCCAG3-201ENST00000298537 TESK2Q96S53 571 aa35.54■■■■□ 3.28
SDCCAG3-201ENST00000298537 MLECQ14165 292 aa35.53■■■■□ 3.28
SDCCAG3-201ENST00000298537 CFAP70Q5T0N1 1121 aa35.52■■■■□ 3.28
SDCCAG3-201ENST00000298537 ARID4BQ4LE39 1312 aaPredicted RBP35.5■■■■□ 3.27
SDCCAG3-201ENST00000298537 FBXO31Q5XUX0 539 aaPredicted RBP35.5■■■■□ 3.27
SDCCAG3-201ENST00000298537 PRKRIP1Q9H875 184 aaPredicted RBP35.5■■■■□ 3.27
SDCCAG3-201ENST00000298537 ZC3H13Q5T200 1668 aaKnown RBP35.5■■■■□ 3.27
SDCCAG3-201ENST00000298537 ARHGAP31Q2M1Z3 1444 aa35.5■■■■□ 3.27
SDCCAG3-201ENST00000298537 CCDC184Q52MB2 194 aa35.5■■■■□ 3.27
SDCCAG3-201ENST00000298537 IFT172Q9UG01 1749 aa35.49■■■■□ 3.27
SDCCAG3-201ENST00000298537 DISP3Q9P2K9 1392 aa35.48■■■■□ 3.27
SDCCAG3-201ENST00000298537 STAC3Q96MF2 364 aa35.48■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms