RNA–Protein interactions for RNA: ENST00000296875.3

GDF9-201, Transcript of growth differentiation factor 9, humanhuman

TSL 5 BASIC

Gene GDF9, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9-201ENST00000296875 CNTLNQ9NXG0 1405 aa20.24■□□□□ 0.83
GDF9-201ENST00000296875 AFAP1Q8N556 730 aa20.23■□□□□ 0.83
GDF9-201ENST00000296875 INO80Q9ULG1 1556 aaPredicted RBP20.22■□□□□ 0.83
GDF9-201ENST00000296875 ZFYVE16Q7Z3T8 1539 aa20.22■□□□□ 0.83
GDF9-201ENST00000296875 WASHC2AQ641Q2 1341 aa20.22■□□□□ 0.83
GDF9-201ENST00000296875 RTEL1-TNFRSF6BF6WH68 1400 aa20.21■□□□□ 0.83
GDF9-201ENST00000296875 POGZQ7Z3K3 1410 aa20.21■□□□□ 0.83
GDF9-201ENST00000296875 KDM5CP41229 1560 aa20.21■□□□□ 0.83
GDF9-201ENST00000296875 ARID4BQ4LE39 1312 aaPredicted RBP20.21■□□□□ 0.83
GDF9-201ENST00000296875 RICTORQ6R327 1708 aa20.21■□□□□ 0.83
GDF9-201ENST00000296875 CCDC7Q96M83 1385 aa20.2■□□□□ 0.82
GDF9-201ENST00000296875 ZNF518AQ6AHZ1 1483 aa20.19■□□□□ 0.82
GDF9-201ENST00000296875 KIDINS220Q9ULH0 1771 aa20.19■□□□□ 0.82
GDF9-201ENST00000296875 UHRF1BP1Q6BDS2 1440 aa20.19■□□□□ 0.82
GDF9-201ENST00000296875 SPATA31E1Q6ZUB1 1445 aa20.17■□□□□ 0.82
GDF9-201ENST00000296875 ATP7AQ04656 1500 aa20.17■□□□□ 0.82
GDF9-201ENST00000296875 SPAG9O60271 1321 aaKnown RBP20.17■□□□□ 0.82
GDF9-201ENST00000296875 FRMPD1Q5SYB0 1578 aa20.17■□□□□ 0.82
GDF9-201ENST00000296875 NBPF8Q3BBV2 869 aa20.16■□□□□ 0.82
GDF9-201ENST00000296875 UNC13BO14795 1591 aa20.15■□□□□ 0.82
GDF9-201ENST00000296875 DUOX2Q9NRD8 1548 aa20.14■□□□□ 0.81
GDF9-201ENST00000296875 FAM135AQ9P2D6 1515 aa20.14■□□□□ 0.81
GDF9-201ENST00000296875 RALGAPBQ86X10 1494 aa20.13■□□□□ 0.81
GDF9-201ENST00000296875 MLH3Q9UHC1 1453 aa20.13■□□□□ 0.81
GDF9-201ENST00000296875 RAPGEF3O95398 923 aa20.12■□□□□ 0.81
GDF9-201ENST00000296875 NEFLP07196 543 aa20.12■□□□□ 0.81
GDF9-201ENST00000296875 HECW2Q9P2P5 1572 aa20.12■□□□□ 0.81
GDF9-201ENST00000296875 ERBINQ96RT1 1412 aa20.12■□□□□ 0.81
GDF9-201ENST00000296875 ROCK2O75116 1388 aaKnown RBP20.12■□□□□ 0.81
GDF9-201ENST00000296875 SUPT16HQ9Y5B9 1047 aaKnown RBP20.11■□□□□ 0.81
GDF9-201ENST00000296875 USP47Q96K76 1375 aa20.1■□□□□ 0.81
GDF9-201ENST00000296875 COL17A1Q9UMD9 1497 aaPredicted RBP20.09■□□□□ 0.81
GDF9-201ENST00000296875 ZMYM4Q5VZL5 1548 aa20.08■□□□□ 0.81
GDF9-201ENST00000296875 CCDC144AA2RUR9 1427 aa20.07■□□□□ 0.8
GDF9-201ENST00000296875 IQGAP3Q86VI3 1631 aa20.07■□□□□ 0.8
GDF9-201ENST00000296875 ABCA6Q8N139 1617 aa20.07■□□□□ 0.8
GDF9-201ENST00000296875 KIF7Q2M1P5 1343 aa20.06■□□□□ 0.8
GDF9-201ENST00000296875 DIP2CQ9Y2E4 1556 aa20.03■□□□□ 0.8
GDF9-201ENST00000296875 MAGI2Q86UL8 1455 aa20.03■□□□□ 0.8
GDF9-201ENST00000296875 DHX29Q7Z478 1369 aaKnown RBP20.02■□□□□ 0.8
GDF9-201ENST00000296875 PRKRIP1Q9H875 184 aaPredicted RBP20.02■□□□□ 0.8
GDF9-201ENST00000296875 EIF2AK4Q9P2K8 1649 aaKnown RBP20.01■□□□□ 0.79
GDF9-201ENST00000296875 DEPDC5O75140 1603 aa20.01■□□□□ 0.79
GDF9-201ENST00000296875 ATP10AO60312 1499 aa20.01■□□□□ 0.79
GDF9-201ENST00000296875 ZNF326Q5BKZ1 582 aaKnown RBP20■□□□□ 0.79
GDF9-201ENST00000296875 CARD11Q9BXL7 1154 aa20■□□□□ 0.79
GDF9-201ENST00000296875 YEATS2Q9ULM3 1422 aa20■□□□□ 0.79
GDF9-201ENST00000296875 A2MP01023 1474 aa19.99■□□□□ 0.79
GDF9-201ENST00000296875 BCORL1Q5H9F3 1711 aa19.98■□□□□ 0.79
GDF9-201ENST00000296875 C11orf95C9JLR9 678 aaPredicted RBP19.97■□□□□ 0.79
GDF9-201ENST00000296875 AEBP2Q6ZN18 517 aaPredicted RBP19.97■□□□□ 0.79
GDF9-201ENST00000296875 KTN1Q86UP2 1357 aaKnown RBP19.97■□□□□ 0.79
GDF9-201ENST00000296875 MROH1Q8NDA8 1641 aa19.97■□□□□ 0.79
GDF9-201ENST00000296875 HNRNPUQ00839 825 aaKnown RBP eCLIP19.96■□□□□ 0.79
GDF9-201ENST00000296875 DCAF11Q8TEB1 546 aa19.96■□□□□ 0.79
GDF9-201ENST00000296875 MYT1LQ9UL68 1186 aa19.96■□□□□ 0.79
GDF9-201ENST00000296875 LAMC1P11047 1609 aa19.96■□□□□ 0.79
GDF9-201ENST00000296875 STAC3Q96MF2 364 aa19.95■□□□□ 0.78
GDF9-201ENST00000296875 RNF17Q9BXT8 1623 aaKnown RBP19.95■□□□□ 0.78
GDF9-201ENST00000296875 VWDEQ8N2E2 1590 aa19.93■□□□□ 0.78
GDF9-201ENST00000296875 MRS2Q9HD23 443 aa19.93■□□□□ 0.78
GDF9-201ENST00000296875 PRAG1Q86YV5 1406 aa19.92■□□□□ 0.78
GDF9-201ENST00000296875 REREQ9P2R6 1566 aa19.92■□□□□ 0.78
GDF9-201ENST00000296875 PRDM15P57071 1507 aaPredicted RBP19.91■□□□□ 0.78
GDF9-201ENST00000296875 ARHGEF40Q8TER5 1519 aa19.91■□□□□ 0.78
GDF9-201ENST00000296875 TRPM1Q7Z4N2 1603 aa19.91■□□□□ 0.78
GDF9-201ENST00000296875 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.9■□□□□ 0.78
GDF9-201ENST00000296875 SIGLEC1Q9BZZ2 1709 aa19.9■□□□□ 0.78
GDF9-201ENST00000296875 KIF3BO15066 747 aa19.9■□□□□ 0.78
GDF9-201ENST00000296875 KDM2AQ9Y2K7 1162 aa19.9■□□□□ 0.78
GDF9-201ENST00000296875 KANK1Q14678 1352 aa19.9■□□□□ 0.78
GDF9-201ENST00000296875 FKBP8Q14318 412 aa19.89■□□□□ 0.77
GDF9-201ENST00000296875 GPRASP1Q5JY77 1395 aa19.89■□□□□ 0.77
GDF9-201ENST00000296875 ERICH6BQ5W0A0 696 aa19.88■□□□□ 0.77
GDF9-201ENST00000296875 ZBED9Q6R2W3 1325 aa19.86■□□□□ 0.77
GDF9-201ENST00000296875 PLA2R1Q13018 1463 aa19.86■□□□□ 0.77
GDF9-201ENST00000296875 KDM4FA0A1W2PPD8 638 aa19.85■□□□□ 0.77
GDF9-201ENST00000296875 TET3O43151 1660 aa19.84■□□□□ 0.77
GDF9-201ENST00000296875 AGLP35573 1532 aa19.84■□□□□ 0.77
GDF9-201ENST00000296875 E9PCH4 1651 aa19.83■□□□□ 0.77
GDF9-201ENST00000296875 CEP152O94986 1710 aa19.82■□□□□ 0.76
GDF9-201ENST00000296875 TRPM2O94759 1503 aa19.82■□□□□ 0.76
GDF9-201ENST00000296875 LMTK2Q8IWU2 1503 aa19.82■□□□□ 0.76
GDF9-201ENST00000296875 ST20-MTHFSA0A0A6YYL1 179 aa19.82■□□□□ 0.76
GDF9-201ENST00000296875 RALBP1Q15311 655 aa19.82■□□□□ 0.76
GDF9-201ENST00000296875 POLR3GLQ9BT43 218 aa19.82■□□□□ 0.76
GDF9-201ENST00000296875 NEURL4Q96JN8 1562 aa19.8■□□□□ 0.76
GDF9-201ENST00000296875 FAM9BQ8IZU0 186 aa19.8■□□□□ 0.76
GDF9-201ENST00000296875 WASHC2CQ9Y4E1 1318 aa19.79■□□□□ 0.76
GDF9-201ENST00000296875 ABCC3O15438 1527 aa19.78■□□□□ 0.76
GDF9-201ENST00000296875 RGL3Q3MIN7 710 aa19.78■□□□□ 0.76
GDF9-201ENST00000296875 EFCAB6Q5THR3 1501 aa19.77■□□□□ 0.76
GDF9-201ENST00000296875 SPHKAPQ2M3C7 1700 aa19.77■□□□□ 0.75
GDF9-201ENST00000296875 PTPRTO14522 1441 aa19.76■□□□□ 0.75
GDF9-201ENST00000296875 SLC24A1O60721 1099 aa19.76■□□□□ 0.75
GDF9-201ENST00000296875 BRD4O60885 1362 aaPredicted RBP19.76■□□□□ 0.75
GDF9-201ENST00000296875 GGT6Q6P531 493 aa19.75■□□□□ 0.75
GDF9-201ENST00000296875 MYBBP1AQ9BQG0 1328 aaKnown RBP19.74■□□□□ 0.75
GDF9-201ENST00000296875 TMC1Q8TDI8 760 aa19.74■□□□□ 0.75
GDF9-201ENST00000296875 ZC3H13Q5T200 1668 aaKnown RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms