RNA–Protein interactions for RNA: ENST00000296859.10

RAPGEF6-201, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF6, Length 5,618 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-201ENST00000296859 HIRIP3Q9BW71 556 aaPredicted RBP5.4□□□□□ -1.54
RAPGEF6-201ENST00000296859 MTMR7Q9Y216 660 aa5.4□□□□□ -1.54
RAPGEF6-201ENST00000296859 TTC5Q8N0Z6 440 aa5.4□□□□□ -1.55
RAPGEF6-201ENST00000296859 PIAS4Q8N2W9 510 aaPredicted RBP5.4□□□□□ -1.55
RAPGEF6-201ENST00000296859 SPAG9O60271 1321 aaKnown RBP5.39□□□□□ -1.55
RAPGEF6-201ENST00000296859 MCCP23508 829 aa5.39□□□□□ -1.55
RAPGEF6-201ENST00000296859 STK31Q9BXU1 1019 aa5.39□□□□□ -1.55
RAPGEF6-201ENST00000296859 FYB1O15117 783 aa5.39□□□□□ -1.55
RAPGEF6-201ENST00000296859 C1orf141Q5JVX7 400 aa5.39□□□□□ -1.55
RAPGEF6-201ENST00000296859 STAC3Q96MF2 364 aa5.39□□□□□ -1.55
RAPGEF6-201ENST00000296859 AKAP17AQ02040 695 aaKnown RBP5.39□□□□□ -1.55
RAPGEF6-201ENST00000296859 CCDC34Q96HJ3 373 aa5.39□□□□□ -1.55
RAPGEF6-201ENST00000296859 BEGAINQ9BUH8 593 aa5.39□□□□□ -1.55
RAPGEF6-201ENST00000296859 CC2D1BQ5T0F9 858 aaKnown RBP5.39□□□□□ -1.55
RAPGEF6-201ENST00000296859 CARD11Q9BXL7 1154 aa5.39□□□□□ -1.55
RAPGEF6-201ENST00000296859 CHMP4BQ9H444 224 aaKnown RBP5.39□□□□□ -1.55
RAPGEF6-201ENST00000296859 TCERG1O14776 1098 aaKnown RBP5.38□□□□□ -1.55
RAPGEF6-201ENST00000296859 WDR78Q5VTH9 848 aa5.38□□□□□ -1.55
RAPGEF6-201ENST00000296859 HSP90AB1P08238 724 aaKnown RBP5.38□□□□□ -1.55
RAPGEF6-201ENST00000296859 RBM5P52756 815 aaKnown RBP eCLIP5.38□□□□□ -1.55
RAPGEF6-201ENST00000296859 MORC1Q86VD1 984 aa5.38□□□□□ -1.55
RAPGEF6-201ENST00000296859 CRBNQ96SW2 442 aa5.38□□□□□ -1.55
RAPGEF6-201ENST00000296859 STRN4Q9NRL3 753 aa5.38□□□□□ -1.55
RAPGEF6-201ENST00000296859 CLEC11AQ9Y240 323 aa5.38□□□□□ -1.55
RAPGEF6-201ENST00000296859 PSME1Q06323 249 aa5.38□□□□□ -1.55
RAPGEF6-201ENST00000296859 ZNF710Q8N1W2 664 aa5.38□□□□□ -1.55
RAPGEF6-201ENST00000296859 IRX6P78412 446 aaPredicted RBP5.38□□□□□ -1.55
RAPGEF6-201ENST00000296859 ZFYVE27Q5T4F4 411 aa5.38□□□□□ -1.55
RAPGEF6-201ENST00000296859 SLC4A10Q6U841 1118 aa5.38□□□□□ -1.55
RAPGEF6-201ENST00000296859 ODF2Q5BJF6 829 aa5.37□□□□□ -1.55
RAPGEF6-201ENST00000296859 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.37□□□□□ -1.55
RAPGEF6-201ENST00000296859 IL27Q8NEV9 243 aa5.37□□□□□ -1.55
RAPGEF6-201ENST00000296859 MPHOSPH10O00566 681 aaKnown RBP5.37□□□□□ -1.55
RAPGEF6-201ENST00000296859 RGS3P49796 1198 aa5.36□□□□□ -1.55
RAPGEF6-201ENST00000296859 PDE3BQ13370 1112 aa5.36□□□□□ -1.55
RAPGEF6-201ENST00000296859 GPATCH3Q96I76 525 aa5.36□□□□□ -1.55
RAPGEF6-201ENST00000296859 CT47A1Q5JQC4 288 aaPredicted RBP5.36□□□□□ -1.55
RAPGEF6-201ENST00000296859 PODXL2Q9NZ53 605 aa5.36□□□□□ -1.55
RAPGEF6-201ENST00000296859 ECM2O94769 699 aaPredicted RBP5.36□□□□□ -1.55
RAPGEF6-201ENST00000296859 APPP05067 770 aa5.36□□□□□ -1.55
RAPGEF6-201ENST00000296859 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.36□□□□□ -1.551e-6■■■■□ 23
RAPGEF6-201ENST00000296859 CCDC27Q2M243 656 aa5.36□□□□□ -1.55
RAPGEF6-201ENST00000296859 ATP2B2Q01814 1243 aa5.35□□□□□ -1.55
RAPGEF6-201ENST00000296859 PATL2C9JE40 543 aaKnown RBP5.35□□□□□ -1.55
RAPGEF6-201ENST00000296859 TPD52L1Q16890 204 aaPredicted RBP5.35□□□□□ -1.55
RAPGEF6-201ENST00000296859 BIN2Q9UBW5 565 aaPredicted RBP5.35□□□□□ -1.55
RAPGEF6-201ENST00000296859 CHMP4AQ9BY43 222 aa5.35□□□□□ -1.55
RAPGEF6-201ENST00000296859 TRIM6-TRIM34B2RNG4 842 aa5.34□□□□□ -1.55
RAPGEF6-201ENST00000296859 KCNA4P22459 653 aa5.34□□□□□ -1.55
RAPGEF6-201ENST00000296859 NOP2P46087 812 aaKnown RBP5.34□□□□□ -1.55
RAPGEF6-201ENST00000296859 GLIPR1L2Q4G1C9 344 aa5.34□□□□□ -1.55
RAPGEF6-201ENST00000296859 FOXD4L1Q9NU39 408 aa5.34□□□□□ -1.55
RAPGEF6-201ENST00000296859 ZNF219Q9P2Y4 722 aaPredicted RBP5.34□□□□□ -1.55
RAPGEF6-201ENST00000296859 TTC16Q8NEE8 873 aa5.34□□□□□ -1.55
RAPGEF6-201ENST00000296859 VTI1AQ96AJ9 217 aa5.34□□□□□ -1.55
RAPGEF6-201ENST00000296859 TEFQ10587 303 aa5.34□□□□□ -1.55
RAPGEF6-201ENST00000296859 EP400NLQ6ZTU2 488 aa5.34□□□□□ -1.55
RAPGEF6-201ENST00000296859 RBM42Q9BTD8 480 aaKnown RBP5.34□□□□□ -1.55
RAPGEF6-201ENST00000296859 WASHC2CQ9Y4E1 1318 aa5.34□□□□□ -1.55
RAPGEF6-201ENST00000296859 TPM4P67936 248 aa5.34□□□□□ -1.55
RAPGEF6-201ENST00000296859 RSPH4AQ5TD94 716 aa5.34□□□□□ -1.55
RAPGEF6-201ENST00000296859 SYNE3Q6ZMZ3 975 aa5.34□□□□□ -1.55
RAPGEF6-201ENST00000296859 NLRP2Q9NX02 1062 aa5.34□□□□□ -1.55
RAPGEF6-201ENST00000296859 PLIN1O60240 522 aa5.34□□□□□ -1.56
RAPGEF6-201ENST00000296859 CBX1P83916 185 aa5.34□□□□□ -1.56
RAPGEF6-201ENST00000296859 FAM69CQ0P6D2 419 aa5.33□□□□□ -1.56
RAPGEF6-201ENST00000296859 WWC3Q9ULE0 1092 aa5.33□□□□□ -1.56
RAPGEF6-201ENST00000296859 HDAC5Q9UQL6 1122 aa5.33□□□□□ -1.56
RAPGEF6-201ENST00000296859 NOL8Q76FK4 1167 aaKnown RBP5.33□□□□□ -1.56
RAPGEF6-201ENST00000296859 PCMTD1Q96MG8 357 aaPredicted RBP5.33□□□□□ -1.56
RAPGEF6-201ENST00000296859 SCLT1Q96NL6 688 aa5.33□□□□□ -1.56
RAPGEF6-201ENST00000296859 TPM3P06753 285 aa5.33□□□□□ -1.56
RAPGEF6-201ENST00000296859 KIF3BO15066 747 aa5.32□□□□□ -1.56
RAPGEF6-201ENST00000296859 U2AF1L5P0DN76 240 aaPredicted RBP5.32□□□□□ -1.56
RAPGEF6-201ENST00000296859 MS4A1P11836 297 aa5.32□□□□□ -1.56
RAPGEF6-201ENST00000296859 U2AF1Q01081 240 aaKnown RBP eCLIP5.32□□□□□ -1.56
RAPGEF6-201ENST00000296859 ZSCAN29Q8IWY8 852 aaPredicted RBP5.32□□□□□ -1.56
RAPGEF6-201ENST00000296859 EIF2S2P20042 333 aaKnown RBP5.32□□□□□ -1.56
RAPGEF6-201ENST00000296859 NEBLO76041 1014 aa5.32□□□□□ -1.56
RAPGEF6-201ENST00000296859 SF3A1Q15459 793 aaKnown RBP5.32□□□□□ -1.56
RAPGEF6-201ENST00000296859 PROSER2Q86WR7 435 aaPredicted RBP5.32□□□□□ -1.56
RAPGEF6-201ENST00000296859 ZMYND15Q9H091 742 aa5.32□□□□□ -1.56
RAPGEF6-201ENST00000296859 HTATSF1O43719 755 aaKnown RBP5.32□□□□□ -1.56
RAPGEF6-201ENST00000296859 RAPGEF4Q8WZA2 1011 aa5.31□□□□□ -1.56
RAPGEF6-201ENST00000296859 BCL11BQ9C0K0 894 aaPredicted RBP5.31□□□□□ -1.56
RAPGEF6-201ENST00000296859 CFAP54Q96N23 3096 aa5.31□□□□□ -1.56
RAPGEF6-201ENST00000296859 NEXNQ0ZGT2 675 aa5.31□□□□□ -1.56
RAPGEF6-201ENST00000296859 DCAF11Q8TEB1 546 aa5.31□□□□□ -1.56
RAPGEF6-201ENST00000296859 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.31□□□□□ -1.56
RAPGEF6-201ENST00000296859 TPM2P07951 284 aa5.31□□□□□ -1.56
RAPGEF6-201ENST00000296859 OSCARQ8IYS5 282 aa5.31□□□□□ -1.56
RAPGEF6-201ENST00000296859 NUTM2GQ5VZR2 741 aa5.3□□□□□ -1.56
RAPGEF6-201ENST00000296859 EYSQ5T1H1 3165 aa5.3□□□□□ -1.56
RAPGEF6-201ENST00000296859 UQCRHP07919 91 aa5.3□□□□□ -1.56
RAPGEF6-201ENST00000296859 DRC1Q96MC2 740 aa5.3□□□□□ -1.56
RAPGEF6-201ENST00000296859 SMC4Q9NTJ3 1288 aa5.3□□□□□ -1.56
RAPGEF6-201ENST00000296859 TSR1Q2NL82 804 aaKnown RBP5.3□□□□□ -1.56
RAPGEF6-201ENST00000296859 TMF1P82094 1093 aa5.3□□□□□ -1.56
RAPGEF6-201ENST00000296859 BICDL1Q6ZP65 573 aa5.3□□□□□ -1.56
RAPGEF6-201ENST00000296859 ADAMTS2O95450 1211 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms