RNA–Protein interactions for RNA: ENST00000296800.4

PRKAA1-201, Transcript of protein kinase AMP-activated catalytic subunit alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PRKAA1, Length 1,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAA1-201ENST00000296800 NBPF3Q9H094 633 aa12.97□□□□□ -0.33
PRKAA1-201ENST00000296800 EMILIN3Q9NT22 766 aa12.95□□□□□ -0.34
PRKAA1-201ENST00000296800 PROX2Q3B8N5 592 aa12.91□□□□□ -0.34
PRKAA1-201ENST00000296800 PPP1R3GB7ZBB8 358 aa12.88□□□□□ -0.35
PRKAA1-201ENST00000296800 COL9A1P20849 921 aa12.88□□□□□ -0.35
PRKAA1-201ENST00000296800 RABGEF1Q9UJ41 708 aa12.88□□□□□ -0.35
PRKAA1-201ENST00000296800 BCAMP50895 628 aa12.87□□□□□ -0.35
PRKAA1-201ENST00000296800 ANKK1Q8NFD2 765 aa12.87□□□□□ -0.35
PRKAA1-201ENST00000296800 PCDHGA10Q9Y5H3 936 aa12.87□□□□□ -0.35
PRKAA1-201ENST00000296800 ITGBL1O95965 494 aaPredicted RBP12.86□□□□□ -0.35
PRKAA1-201ENST00000296800 BBXQ8WY36 941 aaPredicted RBP12.86□□□□□ -0.35
PRKAA1-201ENST00000296800 CAMK2BQ13554 666 aa12.82□□□□□ -0.36
PRKAA1-201ENST00000296800 SUPT5HO00267 1087 aaKnown RBP12.81□□□□□ -0.36
PRKAA1-201ENST00000296800 NACADO15069 1562 aa12.81□□□□□ -0.36
PRKAA1-201ENST00000296800 SOWAHBA6NEL2 793 aa12.8□□□□□ -0.36
PRKAA1-201ENST00000296800 PHF14O94880 888 aa12.79□□□□□ -0.36
PRKAA1-201ENST00000296800 SCRIBQ14160 1630 aa12.79□□□□□ -0.36
PRKAA1-201ENST00000296800 TYW1BQ6NUM6 668 aa12.78□□□□□ -0.36
PRKAA1-201ENST00000296800 Q6ZNB5 142 aa12.78□□□□□ -0.36
PRKAA1-201ENST00000296800 FBXW7Q969H0 707 aa12.78□□□□□ -0.36
PRKAA1-201ENST00000296800 KIAA1468Q9P260 1216 aa12.78□□□□□ -0.36
PRKAA1-201ENST00000296800 LAPTM4BQ86VI4 370 aa12.77□□□□□ -0.37
PRKAA1-201ENST00000296800 ZFRQ96KR1 1074 aaKnown RBP12.77□□□□□ -0.37
PRKAA1-201ENST00000296800 WBP1LQ9NX94 342 aa12.77□□□□□ -0.37
PRKAA1-201ENST00000296800 DPYSL4O14531 572 aa12.76□□□□□ -0.37
PRKAA1-201ENST00000296800 SEPT9Q9UHD8 586 aaPredicted RBP12.75□□□□□ -0.37
PRKAA1-201ENST00000296800 KCNC4Q03721 635 aa12.73□□□□□ -0.37
PRKAA1-201ENST00000296800 SPRYD3Q8NCJ5 442 aa12.73□□□□□ -0.37
PRKAA1-201ENST00000296800 NYAP1Q6ZVC0 841 aa12.72□□□□□ -0.37
PRKAA1-201ENST00000296800 EPAS1Q99814 870 aa12.71□□□□□ -0.37
PRKAA1-201ENST00000296800 AMER1Q5JTC6 1135 aaPredicted RBP12.69□□□□□ -0.38
PRKAA1-201ENST00000296800 C6orf132Q5T0Z8 1188 aa12.69□□□□□ -0.38
PRKAA1-201ENST00000296800 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.69□□□□□ -0.38
PRKAA1-201ENST00000296800 ONECUT3O60422 494 aaPredicted RBP12.67□□□□□ -0.38
PRKAA1-201ENST00000296800 TRIM6-TRIM34B2RNG4 842 aa12.65□□□□□ -0.38
PRKAA1-201ENST00000296800 DDX12PQ92771 950 aa12.65□□□□□ -0.38
PRKAA1-201ENST00000296800 FAM98CQ17RN3 349 aaKnown RBP12.64□□□□□ -0.39
PRKAA1-201ENST00000296800 RBM33Q96EV2 1170 aaKnown RBP12.64□□□□□ -0.39
PRKAA1-201ENST00000296800 HPS5Q9UPZ3 1129 aa12.64□□□□□ -0.39
PRKAA1-201ENST00000296800 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.63□□□□□ -0.39
PRKAA1-201ENST00000296800 TSR3Q9UJK0 312 aaKnown RBP12.63□□□□□ -0.39
PRKAA1-201ENST00000296800 RB1CC1Q8TDY2 1594 aa12.63□□□□□ -0.39
PRKAA1-201ENST00000296800 LCE2BO14633 110 aa12.62□□□□□ -0.39
PRKAA1-201ENST00000296800 LRCH3Q96II8 777 aa12.61□□□□□ -0.39
PRKAA1-201ENST00000296800 RTN4Q9NQC3 1192 aaKnown RBP12.61□□□□□ -0.39
PRKAA1-201ENST00000296800 PDIA6Q15084 440 aa12.6□□□□□ -0.39
PRKAA1-201ENST00000296800 SPDYE16A6NNV3 312 aaPredicted RBP12.58□□□□□ -0.4
PRKAA1-201ENST00000296800 PAXIP1Q6ZW49 1069 aaPredicted RBP12.58□□□□□ -0.4
PRKAA1-201ENST00000296800 CFAP44Q96MT7 982 aa12.58□□□□□ -0.4
PRKAA1-201ENST00000296800 GFRA3O60609 400 aa12.57□□□□□ -0.4
PRKAA1-201ENST00000296800 NBR1Q14596 966 aa12.57□□□□□ -0.4
PRKAA1-201ENST00000296800 E2F4Q16254 413 aa12.57□□□□□ -0.4
PRKAA1-201ENST00000296800 EN1Q05925 392 aaPredicted RBP12.56□□□□□ -0.4
PRKAA1-201ENST00000296800 LAPTM4AQ15012 233 aa12.56□□□□□ -0.4
PRKAA1-201ENST00000296800 WDR70Q9NW82 654 aa12.54□□□□□ -0.4
PRKAA1-201ENST00000296800 TSKSQ9UJT2 592 aa12.54□□□□□ -0.4
PRKAA1-201ENST00000296800 MAP3K7O43318 606 aa12.53□□□□□ -0.4
PRKAA1-201ENST00000296800 TSR1Q2NL82 804 aaKnown RBP12.53□□□□□ -0.4
PRKAA1-201ENST00000296800 TRAF7Q6Q0C0 670 aa12.53□□□□□ -0.4
PRKAA1-201ENST00000296800 ARIH1Q9Y4X5 557 aaPredicted RBP12.53□□□□□ -0.4
PRKAA1-201ENST00000296800 PPP4CP60510 307 aa12.51□□□□□ -0.41
PRKAA1-201ENST00000296800 TJAP1Q5JTD0 557 aa12.5□□□□□ -0.41
PRKAA1-201ENST00000296800 PACS2Q86VP3 889 aa12.5□□□□□ -0.41
PRKAA1-201ENST00000296800 RSF1Q96T23 1441 aaPredicted RBP12.5□□□□□ -0.41
PRKAA1-201ENST00000296800 PRKD2Q9BZL6 878 aa12.49□□□□□ -0.41
PRKAA1-201ENST00000296800 SMAPO00193 183 aa12.48□□□□□ -0.41
PRKAA1-201ENST00000296800 SAMD7Q7Z3H4 446 aa12.47□□□□□ -0.41
PRKAA1-201ENST00000296800 GRXCR2A6NFK2 248 aa12.46□□□□□ -0.41
PRKAA1-201ENST00000296800 PRIM1P49642 420 aaKnown RBP12.45□□□□□ -0.42
PRKAA1-201ENST00000296800 CDCA7LQ96GN5 454 aa12.44□□□□□ -0.42
PRKAA1-201ENST00000296800 MTRQ99707 1265 aa12.44□□□□□ -0.42
PRKAA1-201ENST00000296800 UNC13AQ9UPW8 1703 aa12.43□□□□□ -0.42
PRKAA1-201ENST00000296800 C3orf80F5H4A9 247 aa12.43□□□□□ -0.42
PRKAA1-201ENST00000296800 PRSS12P56730 875 aa12.43□□□□□ -0.42
PRKAA1-201ENST00000296800 PPP1R18Q6NYC8 613 aa12.43□□□□□ -0.42
PRKAA1-201ENST00000296800 CERKQ8TCT0 537 aa12.43□□□□□ -0.42
PRKAA1-201ENST00000296800 FAM198AQ9UFP1 575 aa12.43□□□□□ -0.42
PRKAA1-201ENST00000296800 NRG2O14511 850 aaPredicted RBP12.42□□□□□ -0.42
PRKAA1-201ENST00000296800 OSBPP22059 807 aa12.4□□□□□ -0.42
PRKAA1-201ENST00000296800 ZNF516Q92618 1163 aa12.4□□□□□ -0.42
PRKAA1-201ENST00000296800 IL21Q9HBE4 155 aa12.4□□□□□ -0.42
PRKAA1-201ENST00000296800 BAZ1AQ9NRL2 1556 aaPredicted RBP12.39□□□□□ -0.43
PRKAA1-201ENST00000296800 V9GY48 417 aaPredicted RBP12.37□□□□□ -0.43
PRKAA1-201ENST00000296800 MROH2BQ7Z745 1585 aa12.36□□□□□ -0.43
PRKAA1-201ENST00000296800 TATDN2Q93075 761 aa12.36□□□□□ -0.43
PRKAA1-201ENST00000296800 CECR2Q9BXF3 1484 aa12.35□□□□□ -0.43
PRKAA1-201ENST00000296800 CDHR5Q9HBB8 845 aa12.35□□□□□ -0.43
PRKAA1-201ENST00000296800 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.35□□□□□ -0.43
PRKAA1-201ENST00000296800 PNMA3Q9UL41 463 aa12.35□□□□□ -0.43
PRKAA1-201ENST00000296800 RNF40O75150 1001 aa12.34□□□□□ -0.43
PRKAA1-201ENST00000296800 NKX2-3Q8TAU0 364 aa12.34□□□□□ -0.43
PRKAA1-201ENST00000296800 NBPF26B4DH59 902 aa12.33□□□□□ -0.44
PRKAA1-201ENST00000296800 APLP1P51693 650 aa12.33□□□□□ -0.44
PRKAA1-201ENST00000296800 WIZO95785 1651 aa12.32□□□□□ -0.44
PRKAA1-201ENST00000296800 RBM27Q9P2N5 1060 aaKnown RBP12.31□□□□□ -0.44
PRKAA1-201ENST00000296800 PDZRN3Q9UPQ7 1066 aa12.31□□□□□ -0.44
PRKAA1-201ENST00000296800 ZNF787Q6DD87 383 aa12.3□□□□□ -0.44
PRKAA1-201ENST00000296800 NUDT18Q6ZVK8 323 aa12.3□□□□□ -0.44
PRKAA1-201ENST00000296800 SMARCA4P51532 1647 aa12.29□□□□□ -0.44
PRKAA1-201ENST00000296800 TSHZ2Q9NRE2 1034 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms