RNA–Protein interactions for RNA: ENST00000296137.6

FYCO1-201, Transcript of FYVE and coiled-coil domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene FYCO1, Length 8,504 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1-201ENST00000296137 SLC4A3P48751 1232 aa13.49□□□□□ -0.25
FYCO1-201ENST00000296137 ERICH4A6NGS2 130 aa13.49□□□□□ -0.25
FYCO1-201ENST00000296137 ZRSR2Q15696 482 aaKnown RBP13.49□□□□□ -0.25
FYCO1-201ENST00000296137 GOLGA6L7A0A1B0GV03 622 aa13.48□□□□□ -0.25
FYCO1-201ENST00000296137 PPP1R15AO75807 674 aaPredicted RBP13.48□□□□□ -0.25
FYCO1-201ENST00000296137 DNAJC2Q99543 621 aaKnown RBP13.48□□□□□ -0.25
FYCO1-201ENST00000296137 U2SURPO15042 1029 aaKnown RBP13.48□□□□□ -0.25
FYCO1-201ENST00000296137 RSPH4AQ5TD94 716 aa13.47□□□□□ -0.25
FYCO1-201ENST00000296137 CENPQQ7L2Z9 268 aaPredicted RBP13.47□□□□□ -0.25
FYCO1-201ENST00000296137 NUDCQ9Y266 331 aa13.47□□□□□ -0.25
FYCO1-201ENST00000296137 NEXNQ0ZGT2 675 aa13.47□□□□□ -0.25
FYCO1-201ENST00000296137 IPO8O15397 1037 aaKnown RBP13.46□□□□□ -0.25
FYCO1-201ENST00000296137 TPD52L1Q16890 204 aaPredicted RBP13.46□□□□□ -0.25
FYCO1-201ENST00000296137 IPO7O95373 1038 aaKnown RBP13.46□□□□□ -0.25
FYCO1-201ENST00000296137 CGNQ9P2M7 1197 aaKnown RBP13.46□□□□□ -0.25
FYCO1-201ENST00000296137 PRM3Q9NNZ6 103 aa13.45□□□□□ -0.26
FYCO1-201ENST00000296137 DDX11Q96FC9 970 aa13.45□□□□□ -0.26
FYCO1-201ENST00000296137 RB1CC1Q8TDY2 1594 aa13.45□□□□□ -0.26
FYCO1-201ENST00000296137 FOXD4L5Q5VV16 416 aaPredicted RBP13.45□□□□□ -0.26
FYCO1-201ENST00000296137 FOXD4L4Q8WXT5 416 aaPredicted RBP13.45□□□□□ -0.26
FYCO1-201ENST00000296137 E9PSI1 815 aa13.44□□□□□ -0.26
FYCO1-201ENST00000296137 CHMP4AQ9BY43 222 aa13.44□□□□□ -0.26
FYCO1-201ENST00000296137 CHMP5Q9NZZ3 219 aa13.44□□□□□ -0.26
FYCO1-201ENST00000296137 PLEKHG5O94827 1062 aa13.44□□□□□ -0.26
FYCO1-201ENST00000296137 HMGB1P09429 215 aaKnown RBP13.44□□□□□ -0.26
FYCO1-201ENST00000296137 PRDM10Q9NQV6 1147 aa13.43□□□□□ -0.26
FYCO1-201ENST00000296137 SSR1P43307 286 aaKnown RBP13.43□□□□□ -0.26
FYCO1-201ENST00000296137 CHIC2Q9UKJ5 165 aa13.43□□□□□ -0.26
FYCO1-201ENST00000296137 ZHX1Q9UKY1 873 aaPredicted RBP13.43□□□□□ -0.26
FYCO1-201ENST00000296137 GTF2A1P52655 376 aaPredicted RBP13.42□□□□□ -0.26
FYCO1-201ENST00000296137 ITPRIPQ8IWB1 547 aa13.41□□□□□ -0.26
FYCO1-201ENST00000296137 RBM25P49756 843 aaKnown RBP13.41□□□□□ -0.26
FYCO1-201ENST00000296137 GOLGA2Q08379 1002 aa13.41□□□□□ -0.26
FYCO1-201ENST00000296137 SF3A1Q15459 793 aaKnown RBP13.41□□□□□ -0.26
FYCO1-201ENST00000296137 AXDND1Q5T1B0 1012 aaPredicted RBP13.41□□□□□ -0.26
FYCO1-201ENST00000296137 PDCL2Q8N4E4 241 aa13.41□□□□□ -0.26
FYCO1-201ENST00000296137 ZNF526Q8TF50 670 aaPredicted RBP13.41□□□□□ -0.26
FYCO1-201ENST00000296137 CCP110O43303 1012 aa13.41□□□□□ -0.26
FYCO1-201ENST00000296137 EIF3JO75822 258 aaKnown RBP13.41□□□□□ -0.26
FYCO1-201ENST00000296137 BCL11BQ9C0K0 894 aaPredicted RBP13.4□□□□□ -0.26
FYCO1-201ENST00000296137 CAGE1Q8TC20 777 aa13.4□□□□□ -0.26
FYCO1-201ENST00000296137 H3BQV1 296 aa13.39□□□□□ -0.27
FYCO1-201ENST00000296137 IFFO2Q5TF58 517 aa13.39□□□□□ -0.27
FYCO1-201ENST00000296137 CARD11Q9BXL7 1154 aa13.39□□□□□ -0.27
FYCO1-201ENST00000296137 CLIP1P30622 1438 aa13.39□□□□□ -0.27
FYCO1-201ENST00000296137 GPATCH3Q96I76 525 aa13.39□□□□□ -0.27
FYCO1-201ENST00000296137 SKIDA1Q1XH10 827 aa13.39□□□□□ -0.27
FYCO1-201ENST00000296137 CT47B1P0C2W7 299 aaPredicted RBP13.39□□□□□ -0.27
FYCO1-201ENST00000296137 ISY1Q9ULR0 285 aaKnown RBP13.39□□□□□ -0.27
FYCO1-201ENST00000296137 TIGD1Q96MW7 591 aa13.38□□□□□ -0.27
FYCO1-201ENST00000296137 CHMP7Q8WUX9 453 aaPredicted RBP13.38□□□□□ -0.27
FYCO1-201ENST00000296137 ZCCHC6Q5VYS8 1495 aaKnown RBP13.38□□□□□ -0.27
FYCO1-201ENST00000296137 TNNT1P13805 278 aa13.38□□□□□ -0.27
FYCO1-201ENST00000296137 MCTP1Q6DN14 999 aa13.38□□□□□ -0.27
FYCO1-201ENST00000296137 MYO6Q9UM54 1294 aa13.38□□□□□ -0.27
FYCO1-201ENST00000296137 TRIM6-TRIM34B2RNG4 842 aa13.38□□□□□ -0.27
FYCO1-201ENST00000296137 CAVIN1Q6NZI2 390 aaKnown RBP13.38□□□□□ -0.27
FYCO1-201ENST00000296137 KTN1Q86UP2 1357 aaKnown RBP13.37□□□□□ -0.27
FYCO1-201ENST00000296137 CENPHQ9H3R5 247 aa13.37□□□□□ -0.27
FYCO1-201ENST00000296137 TRAK2O60296 914 aa13.37□□□□□ -0.27
FYCO1-201ENST00000296137 NOL8Q76FK4 1167 aaKnown RBP13.37□□□□□ -0.27
FYCO1-201ENST00000296137 IPO4Q8TEX9 1081 aaKnown RBP13.37□□□□□ -0.27
FYCO1-201ENST00000296137 SASS6Q6UVJ0 657 aa13.37□□□□□ -0.27
FYCO1-201ENST00000296137 ESPNB1AK53 854 aa13.37□□□□□ -0.27
FYCO1-201ENST00000296137 ANKRD20A12PQ8NF67 263 aa13.37□□□□□ -0.27
FYCO1-201ENST00000296137 GOLGA6L10A6NI86 522 aa13.36□□□□□ -0.27
FYCO1-201ENST00000296137 RASSF8Q8NHQ8 419 aa13.36□□□□□ -0.27
FYCO1-201ENST00000296137 NAT10Q9H0A0 1025 aaKnown RBP13.36□□□□□ -0.27
FYCO1-201ENST00000296137 NUCB2P80303 420 aa13.36□□□□□ -0.27
FYCO1-201ENST00000296137 FAM107BQ9H098 131 aa13.36□□□□□ -0.27
FYCO1-201ENST00000296137 CEP162Q5TB80 1403 aa13.36□□□□□ -0.27
FYCO1-201ENST00000296137 LETM1O95202 739 aaPredicted RBP13.35□□□□□ -0.27
FYCO1-201ENST00000296137 FOXD4L6Q3SYB3 417 aaPredicted RBP13.35□□□□□ -0.27
FYCO1-201ENST00000296137 FOXD4L3Q6VB84 417 aaPredicted RBP13.35□□□□□ -0.27
FYCO1-201ENST00000296137 CLASRPQ8N2M8 674 aaKnown RBP13.35□□□□□ -0.27
FYCO1-201ENST00000296137 HOOK1Q9UJC3 728 aaKnown RBP13.35□□□□□ -0.27
FYCO1-201ENST00000296137 CBX1P83916 185 aa13.35□□□□□ -0.27
FYCO1-201ENST00000296137 APBB1O00213 710 aa13.35□□□□□ -0.27
FYCO1-201ENST00000296137 PAXIP1Q6ZW49 1069 aaPredicted RBP13.35□□□□□ -0.27
FYCO1-201ENST00000296137 GOLGA3Q08378 1498 aa13.34□□□□□ -0.27
FYCO1-201ENST00000296137 PHLDB1Q86UU1 1377 aa13.33□□□□□ -0.28
FYCO1-201ENST00000296137 CCDC112Q8NEF3 446 aa13.33□□□□□ -0.28
FYCO1-201ENST00000296137 RALBP1Q15311 655 aa13.32□□□□□ -0.28
FYCO1-201ENST00000296137 GRPEL1Q9HAV7 217 aa13.32□□□□□ -0.28
FYCO1-201ENST00000296137 TICAM2Q86XR7 235 aa13.31□□□□□ -0.28
FYCO1-201ENST00000296137 GORABQ5T7V8 394 aa13.31□□□□□ -0.28
FYCO1-201ENST00000296137 PDE3BQ13370 1112 aa13.31□□□□□ -0.28
FYCO1-201ENST00000296137 CHMP4CQ96CF2 233 aa13.31□□□□□ -0.28
FYCO1-201ENST00000296137 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.31□□□□□ -0.28
FYCO1-201ENST00000296137 ERLIN1O75477 346 aa13.3□□□□□ -0.28
FYCO1-201ENST00000296137 CT47A1Q5JQC4 288 aaPredicted RBP13.3□□□□□ -0.28
FYCO1-201ENST00000296137 HOMEZQ8IX15 550 aa13.3□□□□□ -0.28
FYCO1-201ENST00000296137 ZBED9Q6R2W3 1325 aa13.3□□□□□ -0.28
FYCO1-201ENST00000296137 RNF20Q5VTR2 975 aa13.3□□□□□ -0.28
FYCO1-201ENST00000296137 TSPY26PQ9H489 355 aa13.29□□□□□ -0.28
FYCO1-201ENST00000296137 CGNL1Q0VF96 1302 aa13.29□□□□□ -0.28
FYCO1-201ENST00000296137 FAM184AQ8NB25 1140 aa13.29□□□□□ -0.28
FYCO1-201ENST00000296137 PLEKHD1A6NEE1 506 aa13.29□□□□□ -0.28
FYCO1-201ENST00000296137 DHX8Q14562 1220 aaKnown RBP13.29□□□□□ -0.28
FYCO1-201ENST00000296137 TDO2P48775 406 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms