RNA–Protein interactions for RNA: ENST00000295971.11

RBM47-201, Transcript of RNA binding motif protein 47, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene RBM47, Length 4,056 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-201ENST00000295971 HECW1Q76N89 1606 aa17.33■□□□□ 0.36
RBM47-201ENST00000295971 CLUAP1Q96AJ1 413 aa17.32■□□□□ 0.36
RBM47-201ENST00000295971 TROQ12816 1431 aaPredicted RBP17.31■□□□□ 0.36
RBM47-201ENST00000295971 BRD4O60885 1362 aaPredicted RBP17.31■□□□□ 0.36
RBM47-201ENST00000295971 U2AF1L5P0DN76 240 aaPredicted RBP17.31■□□□□ 0.36
RBM47-201ENST00000295971 U2AF1Q01081 240 aaKnown RBP eCLIP17.31■□□□□ 0.36
RBM47-201ENST00000295971 APAF1O14727 1248 aa17.31■□□□□ 0.36
RBM47-201ENST00000295971 SRPK2P78362 688 aaKnown RBP17.31■□□□□ 0.36
RBM47-201ENST00000295971 STK26Q9P289 416 aa17.31■□□□□ 0.36
RBM47-201ENST00000295971 CUL7Q14999 1698 aa17.31■□□□□ 0.36
RBM47-201ENST00000295971 PAK3O75914 559 aaPredicted RBP17.31■□□□□ 0.36
RBM47-201ENST00000295971 MYH16Q9H6N6 1097 aa17.3■□□□□ 0.36
RBM47-201ENST00000295971 RRP7AQ9Y3A4 280 aaKnown RBP17.3■□□□□ 0.36
RBM47-201ENST00000295971 SPRYD3Q8NCJ5 442 aa17.3■□□□□ 0.36
RBM47-201ENST00000295971 URB2Q14146 1524 aaKnown RBP17.29■□□□□ 0.36
RBM47-201ENST00000295971 ABCC5O15440 1437 aa17.29■□□□□ 0.36
RBM47-201ENST00000295971 SLKQ9H2G2 1235 aaPredicted RBP17.29■□□□□ 0.36
RBM47-201ENST00000295971 TRAK1Q9UPV9 953 aa17.29■□□□□ 0.36
RBM47-201ENST00000295971 NUTM2DQ5VT03 806 aaPredicted RBP17.28■□□□□ 0.36
RBM47-201ENST00000295971 NCOA1Q15788 1441 aa17.28■□□□□ 0.36
RBM47-201ENST00000295971 ANP32BQ92688 251 aaKnown RBP17.27■□□□□ 0.36
RBM47-201ENST00000295971 ADAMTS8Q9UP79 889 aa17.27■□□□□ 0.36
RBM47-201ENST00000295971 ROCK1Q13464 1354 aa17.27■□□□□ 0.36
RBM47-201ENST00000295971 C9orf84Q5VXU9 1444 aa17.26■□□□□ 0.35
RBM47-201ENST00000295971 EIF3AQ14152 1382 aaKnown RBP17.26■□□□□ 0.35
RBM47-201ENST00000295971 BCL2L13Q9BXK5 485 aa17.26■□□□□ 0.35
RBM47-201ENST00000295971 CENPJQ9HC77 1338 aaPredicted RBP17.25■□□□□ 0.35
RBM47-201ENST00000295971 IQGAP2Q13576 1575 aa17.25■□□□□ 0.35
RBM47-201ENST00000295971 SMG6Q86US8 1419 aaKnown RBP17.25■□□□□ 0.35
RBM47-201ENST00000295971 CENPQQ7L2Z9 268 aaPredicted RBP17.25■□□□□ 0.35
RBM47-201ENST00000295971 MS4A1P11836 297 aa17.23■□□□□ 0.35
RBM47-201ENST00000295971 RPRD2Q5VT52 1461 aaKnown RBP17.23■□□□□ 0.35
RBM47-201ENST00000295971 SNAPC4Q5SXM2 1469 aa17.22■□□□□ 0.35
RBM47-201ENST00000295971 COG6Q9Y2V7 657 aa17.21■□□□□ 0.35
RBM47-201ENST00000295971 MRC2Q9UBG0 1479 aa17.21■□□□□ 0.35
RBM47-201ENST00000295971 FAM161AQ3B820 660 aa17.21■□□□□ 0.35
RBM47-201ENST00000295971 KIAA0586Q9BVV6 1533 aa17.2■□□□□ 0.34
RBM47-201ENST00000295971 PLB1Q6P1J6 1458 aa17.19■□□□□ 0.34
RBM47-201ENST00000295971 AFAP1Q8N556 730 aa17.18■□□□□ 0.34
RBM47-201ENST00000295971 LAMC3Q9Y6N6 1575 aa17.18■□□□□ 0.34
RBM47-201ENST00000295971 RWDD1Q9H446 243 aaPredicted RBP17.18■□□□□ 0.34
RBM47-201ENST00000295971 E9PSI1 815 aa17.17■□□□□ 0.34
RBM47-201ENST00000295971 ITPRIPQ8IWB1 547 aa17.17■□□□□ 0.34
RBM47-201ENST00000295971 IFT140Q96RY7 1462 aa17.17■□□□□ 0.34
RBM47-201ENST00000295971 THOC2Q8NI27 1593 aaKnown RBP17.17■□□□□ 0.34
RBM47-201ENST00000295971 SMC4Q9NTJ3 1288 aa17.16■□□□□ 0.34
RBM47-201ENST00000295971 UGGT2Q9NYU1 1516 aa17.15■□□□□ 0.34
RBM47-201ENST00000295971 CAMSAP2Q08AD1 1489 aa17.15■□□□□ 0.34
RBM47-201ENST00000295971 PPP2R1AP30153 589 aa17.15■□□□□ 0.34
RBM47-201ENST00000295971 CFAP43Q8NDM7 1665 aa17.15■□□□□ 0.34
RBM47-201ENST00000295971 USP35Q9P2H5 1018 aa17.15■□□□□ 0.34
RBM47-201ENST00000295971 PMFBP1Q8TBY8 1022 aa17.14■□□□□ 0.33
RBM47-201ENST00000295971 WASHC2CQ9Y4E1 1318 aa17.14■□□□□ 0.33
RBM47-201ENST00000295971 PLEKHG5O94827 1062 aa17.13■□□□□ 0.33
RBM47-201ENST00000295971 SKAP1Q86WV1 359 aa17.13■□□□□ 0.33
RBM47-201ENST00000295971 SYNJ2O15056 1496 aa17.13■□□□□ 0.33
RBM47-201ENST00000295971 HSP90AB1P08238 724 aaKnown RBP17.13■□□□□ 0.33
RBM47-201ENST00000295971 CFAP70Q5T0N1 1121 aa17.13■□□□□ 0.33
RBM47-201ENST00000295971 NCLP19338 710 aaKnown RBP17.12■□□□□ 0.33
RBM47-201ENST00000295971 GZF1Q9H116 711 aaPredicted RBP17.12■□□□□ 0.33
RBM47-201ENST00000295971 MFAP1P55081 439 aaKnown RBP17.12■□□□□ 0.33
RBM47-201ENST00000295971 MLECQ14165 292 aa17.12■□□□□ 0.33
RBM47-201ENST00000295971 HSCBQ8IWL3 235 aa17.12■□□□□ 0.33
RBM47-201ENST00000295971 TRIM44Q96DX7 344 aaPredicted RBP17.12■□□□□ 0.33
RBM47-201ENST00000295971 ARHGEF11O15085 1522 aa17.12■□□□□ 0.33
RBM47-201ENST00000295971 SOX12O15370 315 aa17.11■□□□□ 0.33
RBM47-201ENST00000295971 ARHGAP5Q13017 1502 aa17.11■□□□□ 0.33
RBM47-201ENST00000295971 ZNF608Q9ULD9 1512 aaPredicted RBP17.11■□□□□ 0.33
RBM47-201ENST00000295971 CGNL1Q0VF96 1302 aa17.11■□□□□ 0.33
RBM47-201ENST00000295971 GOLGA6L22H0YM25 854 aa17.11■□□□□ 0.33
RBM47-201ENST00000295971 BACH2Q9BYV9 841 aa17.11■□□□□ 0.33
RBM47-201ENST00000295971 PNNQ9H307 717 aaKnown RBP17.1■□□□□ 0.33
RBM47-201ENST00000295971 PANK1Q8TE04 598 aa17.09■□□□□ 0.33
RBM47-201ENST00000295971 HDGFL2Q7Z4V5 671 aaPredicted RBP17.09■□□□□ 0.33
RBM47-201ENST00000295971 IPO8O15397 1037 aaKnown RBP17.08■□□□□ 0.33
RBM47-201ENST00000295971 C14orf37Q86TY3 774 aa17.07■□□□□ 0.32
RBM47-201ENST00000295971 GSE1Q14687 1217 aa17.07■□□□□ 0.32
RBM47-201ENST00000295971 TMEM132EQ6IEE7 984 aa17.06■□□□□ 0.32
RBM47-201ENST00000295971 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.06■□□□□ 0.32
RBM47-201ENST00000295971 APBB1O00213 710 aa17.06■□□□□ 0.32
RBM47-201ENST00000295971 BCAR3O75815 825 aa17.06■□□□□ 0.32
RBM47-201ENST00000295971 ERBINQ96RT1 1412 aa17.05■□□□□ 0.32
RBM47-201ENST00000295971 CTTNBP2Q8WZ74 1663 aa17.05■□□□□ 0.32
RBM47-201ENST00000295971 ZBTB7CA1YPR0 619 aa17.05■□□□□ 0.32
RBM47-201ENST00000295971 CHMP4BQ9H444 224 aaKnown RBP17.05■□□□□ 0.32
RBM47-201ENST00000295971 C20orf194Q5TEA3 1177 aa17.04■□□□□ 0.32
RBM47-201ENST00000295971 GRIN2AQ12879 1464 aa17.04■□□□□ 0.32
RBM47-201ENST00000295971 TERF2IPQ9NYB0 399 aa17.04■□□□□ 0.32
RBM47-201ENST00000295971 MAGI1Q96QZ7 1491 aaPredicted RBP17.04■□□□□ 0.32
RBM47-201ENST00000295971 NFKBIBQ15653 356 aa17.03■□□□□ 0.32
RBM47-201ENST00000295971 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.03■□□□□ 0.32
RBM47-201ENST00000295971 GPATCH8Q9UKJ3 1502 aaKnown RBP17.03■□□□□ 0.32
RBM47-201ENST00000295971 ELL2O00472 640 aaPredicted RBP17.02■□□□□ 0.32
RBM47-201ENST00000295971 ZKSCAN2Q63HK3 967 aa17.01■□□□□ 0.31
RBM47-201ENST00000295971 TPRNQ4KMQ1 711 aa17.01■□□□□ 0.31
RBM47-201ENST00000295971 L1TD1Q5T7N2 865 aaKnown RBP17.01■□□□□ 0.31
RBM47-201ENST00000295971 RUNDC1Q96C34 613 aa17.01■□□□□ 0.31
RBM47-201ENST00000295971 STAC3Q96MF2 364 aa17.01■□□□□ 0.31
RBM47-201ENST00000295971 TCOF1Q13428 1488 aaKnown RBP17.01■□□□□ 0.31
RBM47-201ENST00000295971 CASC1Q6TDU7 716 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms