RNA–Protein interactions for RNA: ENST00000295598.9

ATP1A1-201, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATP1A1, Length 3,654 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-201ENST00000295598 ARHGAP5Q13017 1502 aa17.27■□□□□ 0.36
ATP1A1-201ENST00000295598 ERCC6L2Q5T890 1561 aa17.27■□□□□ 0.36
ATP1A1-201ENST00000295598 MYBBP1AQ9BQG0 1328 aaKnown RBP17.27■□□□□ 0.36
ATP1A1-201ENST00000295598 NUTM2DQ5VT03 806 aaPredicted RBP17.26■□□□□ 0.35
ATP1A1-201ENST00000295598 TNNT2P45379 298 aaPredicted RBP17.26■□□□□ 0.35
ATP1A1-201ENST00000295598 MBD5Q9P267 1494 aa17.26■□□□□ 0.35
ATP1A1-201ENST00000295598 CCDC146Q8IYE0 955 aa17.25■□□□□ 0.35
ATP1A1-201ENST00000295598 SYCP2Q9BX26 1530 aa17.25■□□□□ 0.35
ATP1A1-201ENST00000295598 RCAN3Q9UKA8 241 aa17.24■□□□□ 0.35
ATP1A1-201ENST00000295598 ADGRL2O95490 1459 aa17.24■□□□□ 0.35
ATP1A1-201ENST00000295598 CDC42BPAQ5VT25 1732 aa17.23■□□□□ 0.35
ATP1A1-201ENST00000295598 KTN1Q86UP2 1357 aaKnown RBP17.22■□□□□ 0.35
ATP1A1-201ENST00000295598 KIF3BO15066 747 aa17.22■□□□□ 0.35
ATP1A1-201ENST00000295598 TESK2Q96S53 571 aa17.22■□□□□ 0.35
ATP1A1-201ENST00000295598 NLRP13Q86W25 1043 aa17.21■□□□□ 0.35
ATP1A1-201ENST00000295598 ADAMTS8Q9UP79 889 aa17.21■□□□□ 0.35
ATP1A1-201ENST00000295598 KDM5CP41229 1560 aa17.21■□□□□ 0.35
ATP1A1-201ENST00000295598 ITSN2Q9NZM3 1697 aa17.21■□□□□ 0.35
ATP1A1-201ENST00000295598 ABCA8O94911 1581 aa17.21■□□□□ 0.34
ATP1A1-201ENST00000295598 PER1O15534 1290 aaPredicted RBP17.2■□□□□ 0.34
ATP1A1-201ENST00000295598 SMG6Q86US8 1419 aaKnown RBP17.2■□□□□ 0.34
ATP1A1-201ENST00000295598 CCDC141Q6ZP82 1450 aa17.2■□□□□ 0.34
ATP1A1-201ENST00000295598 FAM135AQ9P2D6 1515 aa17.2■□□□□ 0.34
ATP1A1-201ENST00000295598 RALBP1Q15311 655 aa17.2■□□□□ 0.34
ATP1A1-201ENST00000295598 C20orf194Q5TEA3 1177 aa17.2■□□□□ 0.34
ATP1A1-201ENST00000295598 PLA2R1Q13018 1463 aa17.2■□□□□ 0.34
ATP1A1-201ENST00000295598 RALGAPBQ86X10 1494 aa17.19■□□□□ 0.34
ATP1A1-201ENST00000295598 RRP1P56182 461 aaKnown RBP17.19■□□□□ 0.34
ATP1A1-201ENST00000295598 EFCAB2Q5VUJ9 269 aa17.19■□□□□ 0.34
ATP1A1-201ENST00000295598 TMF1P82094 1093 aa17.18■□□□□ 0.34
ATP1A1-201ENST00000295598 SPAG9O60271 1321 aaKnown RBP17.17■□□□□ 0.34
ATP1A1-201ENST00000295598 SAMD9LQ8IVG5 1584 aa17.17■□□□□ 0.34
ATP1A1-201ENST00000295598 NEUROD2Q15784 382 aa17.17■□□□□ 0.34
ATP1A1-201ENST00000295598 KNSTRNQ9Y448 316 aa17.16■□□□□ 0.34
ATP1A1-201ENST00000295598 PRAG1Q86YV5 1406 aa17.16■□□□□ 0.34
ATP1A1-201ENST00000295598 CFAP70Q5T0N1 1121 aa17.16■□□□□ 0.34
ATP1A1-201ENST00000295598 TRAPPC8Q9Y2L5 1435 aa17.16■□□□□ 0.34
ATP1A1-201ENST00000295598 FANCIQ9NVI1 1328 aa17.16■□□□□ 0.34
ATP1A1-201ENST00000295598 ADGBQ8N7X0 1667 aa17.15■□□□□ 0.34
ATP1A1-201ENST00000295598 CRBNQ96SW2 442 aa17.15■□□□□ 0.34
ATP1A1-201ENST00000295598 ARHGEF12Q9NZN5 1544 aa17.15■□□□□ 0.34
ATP1A1-201ENST00000295598 A2MP01023 1474 aa17.15■□□□□ 0.34
ATP1A1-201ENST00000295598 SAFB2Q14151 953 aaKnown RBP eCLIP17.14■□□□□ 0.33
ATP1A1-201ENST00000295598 UHRF1BP1Q6BDS2 1440 aa17.14■□□□□ 0.33
ATP1A1-201ENST00000295598 TTC37Q6PGP7 1564 aa17.14■□□□□ 0.33
ATP1A1-201ENST00000295598 ERICH6BQ5W0A0 696 aa17.12■□□□□ 0.33
ATP1A1-201ENST00000295598 GGT6Q6P531 493 aa17.12■□□□□ 0.33
ATP1A1-201ENST00000295598 BRD4O60885 1362 aaPredicted RBP17.11■□□□□ 0.33
ATP1A1-201ENST00000295598 WDR43Q15061 677 aaKnown RBP eCLIP17.11■□□□□ 0.331e-7■□□□□ 8.1
ATP1A1-201ENST00000295598 LAS1LQ9Y4W2 734 aaKnown RBP17.11■□□□□ 0.33
ATP1A1-201ENST00000295598 RSPH4AQ5TD94 716 aa17.1■□□□□ 0.33
ATP1A1-201ENST00000295598 NOP58Q9Y2X3 529 aaKnown RBP17.1■□□□□ 0.33
ATP1A1-201ENST00000295598 CROCC2H7BZ55 1655 aa17.1■□□□□ 0.33
ATP1A1-201ENST00000295598 TMEM132EQ6IEE7 984 aa17.09■□□□□ 0.33
ATP1A1-201ENST00000295598 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.09■□□□□ 0.339e-7■■■□□ 16.6
ATP1A1-201ENST00000295598 ARID4BQ4LE39 1312 aaPredicted RBP17.09■□□□□ 0.33
ATP1A1-201ENST00000295598 ERBINQ96RT1 1412 aa17.09■□□□□ 0.33
ATP1A1-201ENST00000295598 ANP32AP39687 249 aaKnown RBP17.08■□□□□ 0.32
ATP1A1-201ENST00000295598 TRAK1Q9UPV9 953 aa17.08■□□□□ 0.32
ATP1A1-201ENST00000295598 RRP7AQ9Y3A4 280 aaKnown RBP17.08■□□□□ 0.32
ATP1A1-201ENST00000295598 CDC42BPBQ9Y5S2 1711 aa17.08■□□□□ 0.32
ATP1A1-201ENST00000295598 PPP2R1AP30153 589 aa17.07■□□□□ 0.32
ATP1A1-201ENST00000295598 SLC4A3P48751 1232 aa17.07■□□□□ 0.32
ATP1A1-201ENST00000295598 BCL11AQ9H165 835 aa17.07■□□□□ 0.32
ATP1A1-201ENST00000295598 LRPPRCP42704 1394 aaKnown RBP17.07■□□□□ 0.32
ATP1A1-201ENST00000295598 ADCY10Q96PN6 1610 aa17.07■□□□□ 0.32
ATP1A1-201ENST00000295598 SHANK2Q9UPX8 1470 aa17.06■□□□□ 0.32
ATP1A1-201ENST00000295598 SCAPERQ9BY12 1400 aa17.06■□□□□ 0.32
ATP1A1-201ENST00000295598 ADGRF5Q8IZF2 1346 aa17.06■□□□□ 0.32
ATP1A1-201ENST00000295598 APAF1O14727 1248 aa17.05■□□□□ 0.32
ATP1A1-201ENST00000295598 SPINK5Q9NQ38 1064 aaPredicted RBP17.05■□□□□ 0.32
ATP1A1-201ENST00000295598 PARD3Q8TEW0 1356 aa17.05■□□□□ 0.32
ATP1A1-201ENST00000295598 KDM5DQ9BY66 1539 aa17.05■□□□□ 0.32
ATP1A1-201ENST00000295598 RGS3P49796 1198 aa17.04■□□□□ 0.32
ATP1A1-201ENST00000295598 RNF123Q5XPI4 1314 aa17.04■□□□□ 0.32
ATP1A1-201ENST00000295598 ZBTB47Q9UFB7 747 aaPredicted RBP17.03■□□□□ 0.32
ATP1A1-201ENST00000295598 DMRT2Q9Y5R5 561 aa17.03■□□□□ 0.32
ATP1A1-201ENST00000295598 PDE4AP27815 886 aa17.01■□□□□ 0.31
ATP1A1-201ENST00000295598 CHD1O14646 1710 aa17.01■□□□□ 0.31
ATP1A1-201ENST00000295598 BCAR3O75815 825 aa17■□□□□ 0.31
ATP1A1-201ENST00000295598 PLEKHH1Q9ULM0 1364 aa17■□□□□ 0.31
ATP1A1-201ENST00000295598 DEKP35659 375 aaKnown RBP16.99■□□□□ 0.31
ATP1A1-201ENST00000295598 AMER1Q5JTC6 1135 aaPredicted RBP16.99■□□□□ 0.31
ATP1A1-201ENST00000295598 MAGI2Q86UL8 1455 aa16.99■□□□□ 0.31
ATP1A1-201ENST00000295598 BCL2L13Q9BXK5 485 aa16.99■□□□□ 0.31
ATP1A1-201ENST00000295598 SLC12A5Q9H2X9 1139 aa16.98■□□□□ 0.31
ATP1A1-201ENST00000295598 STK26Q9P289 416 aa16.98■□□□□ 0.31
ATP1A1-201ENST00000295598 UGGT1Q9NYU2 1555 aa16.98■□□□□ 0.31
ATP1A1-201ENST00000295598 IPO9Q96P70 1041 aaKnown RBP16.98■□□□□ 0.31
ATP1A1-201ENST00000295598 CARD14Q9BXL6 1004 aa16.97■□□□□ 0.31
ATP1A1-201ENST00000295598 PLCH2O75038 1416 aa16.97■□□□□ 0.31
ATP1A1-201ENST00000295598 PREX2Q70Z35 1606 aa16.96■□□□□ 0.31
ATP1A1-201ENST00000295598 FRAT1Q92837 279 aaPredicted RBP16.95■□□□□ 0.3
ATP1A1-201ENST00000295598 COL17A1Q9UMD9 1497 aaPredicted RBP16.95■□□□□ 0.3
ATP1A1-201ENST00000295598 ARHGEF5Q12774 1597 aa16.95■□□□□ 0.3
ATP1A1-201ENST00000295598 RAPGEF3O95398 923 aa16.95■□□□□ 0.3
ATP1A1-201ENST00000295598 POLR1AO95602 1720 aaPredicted RBP16.93■□□□□ 0.3
ATP1A1-201ENST00000295598 GOLGA2Q08379 1002 aa16.93■□□□□ 0.3
ATP1A1-201ENST00000295598 DUSP27Q5VZP5 1158 aa16.93■□□□□ 0.3
ATP1A1-201ENST00000295598 TRPM1Q7Z4N2 1603 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms