RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 TAOK2Q9UL54 1235 aa22.46■■□□□ 1.19
CDC42EP3-201ENST00000295324 ANKRD50Q9ULJ7 1429 aa22.46■■□□□ 1.19
CDC42EP3-201ENST00000295324 DHX57Q6P158 1386 aaKnown RBP22.45■■□□□ 1.19
CDC42EP3-201ENST00000295324 MCCP23508 829 aa22.45■■□□□ 1.18
CDC42EP3-201ENST00000295324 PSME1Q06323 249 aa22.45■■□□□ 1.18
CDC42EP3-201ENST00000295324 SNAPC4Q5SXM2 1469 aa22.45■■□□□ 1.18
CDC42EP3-201ENST00000295324 RCAN3Q9UKA8 241 aa22.44■■□□□ 1.18
CDC42EP3-201ENST00000295324 ITPRIPQ8IWB1 547 aa22.44■■□□□ 1.18
CDC42EP3-201ENST00000295324 ATF3P18847 181 aa22.43■■□□□ 1.18
CDC42EP3-201ENST00000295324 ERICH3Q5RHP9 1530 aa22.43■■□□□ 1.18
CDC42EP3-201ENST00000295324 SMC4Q9NTJ3 1288 aa22.42■■□□□ 1.18
CDC42EP3-201ENST00000295324 LRRC9Q6ZRR7 1453 aa22.42■■□□□ 1.18
CDC42EP3-201ENST00000295324 TAF7LQ5H9L4 462 aa22.41■■□□□ 1.18
CDC42EP3-201ENST00000295324 NCOA2Q15596 1464 aa22.41■■□□□ 1.18
CDC42EP3-201ENST00000295324 C1orf141Q5JVX7 400 aa22.41■■□□□ 1.18
CDC42EP3-201ENST00000295324 APBB1O00213 710 aa22.41■■□□□ 1.18
CDC42EP3-201ENST00000295324 B4GALNT3Q6L9W6 998 aa22.41■■□□□ 1.18
CDC42EP3-201ENST00000295324 USP47Q96K76 1375 aa22.4■■□□□ 1.18
CDC42EP3-201ENST00000295324 RWDD1Q9H446 243 aaPredicted RBP22.4■■□□□ 1.18
CDC42EP3-201ENST00000295324 CCDC146Q8IYE0 955 aa22.39■■□□□ 1.18
CDC42EP3-201ENST00000295324 KIF21BO75037 1637 aa22.39■■□□□ 1.18
CDC42EP3-201ENST00000295324 TULP1O00294 542 aaPredicted RBP22.39■■□□□ 1.17
CDC42EP3-201ENST00000295324 HSP90AB1P08238 724 aaKnown RBP22.39■■□□□ 1.17
CDC42EP3-201ENST00000295324 GTF2E1P29083 439 aaPredicted RBP22.39■■□□□ 1.17
CDC42EP3-201ENST00000295324 ISY1Q9ULR0 285 aaKnown RBP22.39■■□□□ 1.17
CDC42EP3-201ENST00000295324 GORABQ5T7V8 394 aa22.38■■□□□ 1.17
CDC42EP3-201ENST00000295324 CHMP3Q9Y3E7 222 aa22.38■■□□□ 1.17
CDC42EP3-201ENST00000295324 CENPJQ9HC77 1338 aaPredicted RBP22.38■■□□□ 1.17
CDC42EP3-201ENST00000295324 HMMRO75330 724 aa22.38■■□□□ 1.17
CDC42EP3-201ENST00000295324 PDE3BQ13370 1112 aa22.38■■□□□ 1.17
CDC42EP3-201ENST00000295324 MYBBP1AQ9BQG0 1328 aaKnown RBP22.38■■□□□ 1.17
CDC42EP3-201ENST00000295324 DNMBPQ6XZF7 1577 aa22.37■■□□□ 1.17
CDC42EP3-201ENST00000295324 KIAA1211Q6ZU35 1233 aa22.37■■□□□ 1.17
CDC42EP3-201ENST00000295324 SYNJ1O43426 1573 aa22.36■■□□□ 1.17
CDC42EP3-201ENST00000295324 PLEKHH2Q8IVE3 1493 aa22.36■■□□□ 1.17
CDC42EP3-201ENST00000295324 MEX3CQ5U5Q3 659 aaKnown RBP22.35■■□□□ 1.17
CDC42EP3-201ENST00000295324 TPRNQ4KMQ1 711 aa22.35■■□□□ 1.17
CDC42EP3-201ENST00000295324 TEFQ10587 303 aa22.35■■□□□ 1.17
CDC42EP3-201ENST00000295324 EFCAB5A4FU69 1503 aa22.34■■□□□ 1.17
CDC42EP3-201ENST00000295324 SLC4A10Q6U841 1118 aa22.34■■□□□ 1.17
CDC42EP3-201ENST00000295324 DNAJC5BQ9UF47 199 aa22.34■■□□□ 1.17
CDC42EP3-201ENST00000295324 G3V3G9 751 aa22.32■■□□□ 1.16
CDC42EP3-201ENST00000295324 DCAF8Q5TAQ9 597 aa22.32■■□□□ 1.16
CDC42EP3-201ENST00000295324 TXNDC2Q86VQ3 553 aa22.32■■□□□ 1.16
CDC42EP3-201ENST00000295324 TOP2BQ02880 1626 aa22.31■■□□□ 1.16
CDC42EP3-201ENST00000295324 LAMC3Q9Y6N6 1575 aa22.31■■□□□ 1.16
CDC42EP3-201ENST00000295324 GPATCH3Q96I76 525 aa22.31■■□□□ 1.16
CDC42EP3-201ENST00000295324 THEMISQ8N1K5 641 aaPredicted RBP22.3■■□□□ 1.16
CDC42EP3-201ENST00000295324 HSCBQ8IWL3 235 aa22.29■■□□□ 1.16
CDC42EP3-201ENST00000295324 TROQ12816 1431 aaPredicted RBP22.29■■□□□ 1.16
CDC42EP3-201ENST00000295324 PMFBP1Q8TBY8 1022 aa22.29■■□□□ 1.16
CDC42EP3-201ENST00000295324 TTC5Q8N0Z6 440 aa22.28■■□□□ 1.16
CDC42EP3-201ENST00000295324 ERICH6BQ5W0A0 696 aa22.28■■□□□ 1.16
CDC42EP3-201ENST00000295324 KIAA0586Q9BVV6 1533 aa22.27■■□□□ 1.16
CDC42EP3-201ENST00000295324 SCAPERQ9BY12 1400 aa22.27■■□□□ 1.16
CDC42EP3-201ENST00000295324 DIAPH1O60610 1272 aaKnown RBP22.27■■□□□ 1.16
CDC42EP3-201ENST00000295324 PRXQ9BXM0 1461 aa22.26■■□□□ 1.15
CDC42EP3-201ENST00000295324 RRP7AQ9Y3A4 280 aaKnown RBP22.26■■□□□ 1.15
CDC42EP3-201ENST00000295324 GOLGA6L4A6NEF3 574 aa22.26■■□□□ 1.15
CDC42EP3-201ENST00000295324 TRIM44Q96DX7 344 aaPredicted RBP22.26■■□□□ 1.15
CDC42EP3-201ENST00000295324 POGZQ7Z3K3 1410 aa22.24■■□□□ 1.15
CDC42EP3-201ENST00000295324 MIA2Q96PC5 1412 aa22.24■■□□□ 1.15
CDC42EP3-201ENST00000295324 CLUAP1Q96AJ1 413 aa22.24■■□□□ 1.15
CDC42EP3-201ENST00000295324 ARAP1Q96P48 1450 aa22.24■■□□□ 1.15
CDC42EP3-201ENST00000295324 RRBP1Q9P2E9 1410 aaKnown RBP22.24■■□□□ 1.15
CDC42EP3-201ENST00000295324 PROSER2Q86WR7 435 aaPredicted RBP22.23■■□□□ 1.15
CDC42EP3-201ENST00000295324 SLC52A1Q9NWF4 448 aa22.22■■□□□ 1.15
CDC42EP3-201ENST00000295324 MSH5O43196 834 aa22.22■■□□□ 1.15
CDC42EP3-201ENST00000295324 RAPGEF3O95398 923 aa22.22■■□□□ 1.15
CDC42EP3-201ENST00000295324 TMEM132EQ6IEE7 984 aa22.21■■□□□ 1.15
CDC42EP3-201ENST00000295324 BICRAQ9NZM4 1560 aa22.21■■□□□ 1.15
CDC42EP3-201ENST00000295324 PTMAP06454 111 aaKnown RBP22.21■■□□□ 1.15
CDC42EP3-201ENST00000295324 RAPGEF4Q8WZA2 1011 aa22.2■■□□□ 1.14
CDC42EP3-201ENST00000295324 FRAT2O75474 233 aaPredicted RBP22.2■■□□□ 1.14
CDC42EP3-201ENST00000295324 C9orf84Q5VXU9 1444 aa22.2■■□□□ 1.14
CDC42EP3-201ENST00000295324 PRKRIP1Q9H875 184 aaPredicted RBP22.19■■□□□ 1.14
CDC42EP3-201ENST00000295324 EHBP1L1Q8N3D4 1523 aa22.19■■□□□ 1.14
CDC42EP3-201ENST00000295324 GPRASP1Q5JY77 1395 aa22.19■■□□□ 1.14
CDC42EP3-201ENST00000295324 ABCA10Q8WWZ4 1543 aa22.18■■□□□ 1.14
CDC42EP3-201ENST00000295324 NGEFQ8N5V2 710 aa22.18■■□□□ 1.14
CDC42EP3-201ENST00000295324 ELL2O00472 640 aaPredicted RBP22.18■■□□□ 1.14
CDC42EP3-201ENST00000295324 HFM1A2PYH4 1435 aa22.18■■□□□ 1.14
CDC42EP3-201ENST00000295324 NEXNQ0ZGT2 675 aa22.17■■□□□ 1.14
CDC42EP3-201ENST00000295324 GNL2Q13823 731 aaKnown RBP22.17■■□□□ 1.14
CDC42EP3-201ENST00000295324 E9PSI1 815 aa22.17■■□□□ 1.14
CDC42EP3-201ENST00000295324 SYTL4Q96C24 671 aaPredicted RBP22.17■■□□□ 1.14
CDC42EP3-201ENST00000295324 NLRP6P59044 892 aa22.16■■□□□ 1.14
CDC42EP3-201ENST00000295324 HECW1Q76N89 1606 aa22.16■■□□□ 1.14
CDC42EP3-201ENST00000295324 CFAP70Q5T0N1 1121 aa22.15■■□□□ 1.14
CDC42EP3-201ENST00000295324 TRIM6-TRIM34B2RNG4 842 aa22.15■■□□□ 1.14
CDC42EP3-201ENST00000295324 CABP2Q9NPB3 220 aa22.14■■□□□ 1.14
CDC42EP3-201ENST00000295324 ANKLE2Q86XL3 938 aa22.14■■□□□ 1.13
CDC42EP3-201ENST00000295324 NLRP2Q9NX02 1062 aa22.13■■□□□ 1.13
CDC42EP3-201ENST00000295324 ESCO1Q5FWF5 840 aa22.11■■□□□ 1.13
CDC42EP3-201ENST00000295324 APAF1O14727 1248 aa22.1■■□□□ 1.13
CDC42EP3-201ENST00000295324 EIF2S2P20042 333 aaKnown RBP22.1■■□□□ 1.13
CDC42EP3-201ENST00000295324 MAGI1Q96QZ7 1491 aaPredicted RBP22.1■■□□□ 1.13
CDC42EP3-201ENST00000295324 GGNBP2Q9H3C7 697 aa22.1■■□□□ 1.13
CDC42EP3-201ENST00000295324 RIPK4P57078 832 aa22.09■■□□□ 1.13
CDC42EP3-201ENST00000295324 PLCB2Q00722 1185 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms