RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 TROQ12816 1431 aaPredicted RBP8.53□□□□□ -1.04
VCAM1-201ENST00000294728 C9orf84Q5VXU9 1444 aa8.53□□□□□ -1.04
VCAM1-201ENST00000294728 HSPA2P54652 639 aa8.52□□□□□ -1.04
VCAM1-201ENST00000294728 E9PCH4 1651 aa8.52□□□□□ -1.04
VCAM1-201ENST00000294728 KTN1Q86UP2 1357 aaKnown RBP8.52□□□□□ -1.04
VCAM1-201ENST00000294728 LAMC1P11047 1609 aa8.52□□□□□ -1.04
VCAM1-201ENST00000294728 ATP10AO60312 1499 aa8.52□□□□□ -1.05
VCAM1-201ENST00000294728 ARHGEF5Q12774 1597 aa8.52□□□□□ -1.05
VCAM1-201ENST00000294728 HSPA5P11021 654 aaKnown RBP8.52□□□□□ -1.05
VCAM1-201ENST00000294728 PTPRTO14522 1441 aa8.52□□□□□ -1.05
VCAM1-201ENST00000294728 RBM19Q9Y4C8 960 aaKnown RBP8.51□□□□□ -1.05
VCAM1-201ENST00000294728 PLCH2O75038 1416 aa8.51□□□□□ -1.05
VCAM1-201ENST00000294728 CAMSAP2Q08AD1 1489 aa8.51□□□□□ -1.05
VCAM1-201ENST00000294728 ROCK2O75116 1388 aaKnown RBP8.51□□□□□ -1.05
VCAM1-201ENST00000294728 ILDR2Q71H61 639 aa8.51□□□□□ -1.05
VCAM1-201ENST00000294728 CDC42BPAQ5VT25 1732 aa8.51□□□□□ -1.05
VCAM1-201ENST00000294728 RALGAPBQ86X10 1494 aa8.51□□□□□ -1.05
VCAM1-201ENST00000294728 KIAA1107Q9UPP5 1409 aa8.5□□□□□ -1.05
VCAM1-201ENST00000294728 INSRP06213 1382 aa8.5□□□□□ -1.05
VCAM1-201ENST00000294728 LTBP4Q8N2S1 1624 aa8.5□□□□□ -1.05
VCAM1-201ENST00000294728 MYT1LQ9UL68 1186 aa8.5□□□□□ -1.05
VCAM1-201ENST00000294728 ATP1B4Q9UN42 357 aaPredicted RBP8.5□□□□□ -1.05
VCAM1-201ENST00000294728 MYO5CQ9NQX4 1742 aa8.5□□□□□ -1.05
VCAM1-201ENST00000294728 ARID3CA6NKF2 412 aa8.5□□□□□ -1.05
VCAM1-201ENST00000294728 PRKRIP1Q9H875 184 aaPredicted RBP8.5□□□□□ -1.05
VCAM1-201ENST00000294728 RNF123Q5XPI4 1314 aa8.49□□□□□ -1.05
VCAM1-201ENST00000294728 GPATCH8Q9UKJ3 1502 aaKnown RBP8.49□□□□□ -1.05
VCAM1-201ENST00000294728 SMG6Q86US8 1419 aaKnown RBP8.49□□□□□ -1.05
VCAM1-201ENST00000294728 CDK11AQ9UQ88 783 aaPredicted RBP8.49□□□□□ -1.05
VCAM1-201ENST00000294728 PLEKHD1A6NEE1 506 aa8.49□□□□□ -1.05
VCAM1-201ENST00000294728 DMRT2Q9Y5R5 561 aa8.49□□□□□ -1.05
VCAM1-201ENST00000294728 PPP4R2Q9NY27 417 aa8.48□□□□□ -1.05
VCAM1-201ENST00000294728 DISP3Q9P2K9 1392 aa8.48□□□□□ -1.05
VCAM1-201ENST00000294728 C3P01024 1663 aa8.48□□□□□ -1.05
VCAM1-201ENST00000294728 L3MBTL2Q969R5 705 aa8.48□□□□□ -1.05
VCAM1-201ENST00000294728 MAST1Q9Y2H9 1570 aa8.48□□□□□ -1.05
VCAM1-201ENST00000294728 SCAPERQ9BY12 1400 aa8.48□□□□□ -1.05
VCAM1-201ENST00000294728 AGLP35573 1532 aa8.48□□□□□ -1.05
VCAM1-201ENST00000294728 DIP2CQ9Y2E4 1556 aa8.48□□□□□ -1.05
VCAM1-201ENST00000294728 DHX29Q7Z478 1369 aaKnown RBP8.47□□□□□ -1.05
VCAM1-201ENST00000294728 SETD1BQ9UPS6 1966 aaKnown RBP8.47□□□□□ -1.05
VCAM1-201ENST00000294728 TRIM52Q96A61 297 aa8.46□□□□□ -1.05
VCAM1-201ENST00000294728 ZNF518AQ6AHZ1 1483 aa8.46□□□□□ -1.06
VCAM1-201ENST00000294728 MROH2AA6NES4 1674 aa8.45□□□□□ -1.06
VCAM1-201ENST00000294728 ABCA6Q8N139 1617 aa8.45□□□□□ -1.06
VCAM1-201ENST00000294728 HNRNPUQ00839 825 aaKnown RBP eCLIP8.45□□□□□ -1.06
VCAM1-201ENST00000294728 RRP7BPQ9NSQ0 103 aa8.45□□□□□ -1.06
VCAM1-201ENST00000294728 ANKRD30AQ9BXX3 1397 aa8.44□□□□□ -1.06
VCAM1-201ENST00000294728 KIF7Q2M1P5 1343 aa8.44□□□□□ -1.06
VCAM1-201ENST00000294728 UNC13BO14795 1591 aa8.44□□□□□ -1.06
VCAM1-201ENST00000294728 MLH3Q9UHC1 1453 aa8.44□□□□□ -1.06
VCAM1-201ENST00000294728 PREX2Q70Z35 1606 aa8.43□□□□□ -1.06
VCAM1-201ENST00000294728 TRPM1Q7Z4N2 1603 aa8.43□□□□□ -1.06
VCAM1-201ENST00000294728 NBPF8Q3BBV2 869 aa8.43□□□□□ -1.06
VCAM1-201ENST00000294728 ZNF142P52746 1687 aaPredicted RBP8.42□□□□□ -1.06
VCAM1-201ENST00000294728 HIRIP3Q9BW71 556 aaPredicted RBP8.42□□□□□ -1.06
VCAM1-201ENST00000294728 LRPPRCP42704 1394 aaKnown RBP8.42□□□□□ -1.06
VCAM1-201ENST00000294728 CDC42BPBQ9Y5S2 1711 aa8.42□□□□□ -1.06
VCAM1-201ENST00000294728 PLXNC1O60486 1568 aa8.42□□□□□ -1.06
VCAM1-201ENST00000294728 TRAPPC8Q9Y2L5 1435 aa8.41□□□□□ -1.06
VCAM1-201ENST00000294728 EIF2AK4Q9P2K8 1649 aaKnown RBP8.41□□□□□ -1.06
VCAM1-201ENST00000294728 C11orf95C9JLR9 678 aaPredicted RBP8.41□□□□□ -1.06
VCAM1-201ENST00000294728 MLECQ14165 292 aa8.41□□□□□ -1.06
VCAM1-201ENST00000294728 NPATQ14207 1427 aa8.41□□□□□ -1.06
VCAM1-201ENST00000294728 EFCAB2Q5VUJ9 269 aa8.41□□□□□ -1.06
VCAM1-201ENST00000294728 ANKRD50Q9ULJ7 1429 aa8.41□□□□□ -1.06
VCAM1-201ENST00000294728 ABCC1P33527 1531 aa8.41□□□□□ -1.06
VCAM1-201ENST00000294728 USP47Q96K76 1375 aa8.4□□□□□ -1.06
VCAM1-201ENST00000294728 BRD4O60885 1362 aaPredicted RBP8.4□□□□□ -1.07
VCAM1-201ENST00000294728 IQGAP3Q86VI3 1631 aa8.4□□□□□ -1.07
VCAM1-201ENST00000294728 CEBPAP49715 358 aaPredicted RBP8.4□□□□□ -1.07
VCAM1-201ENST00000294728 KIDINS220Q9ULH0 1771 aa8.4□□□□□ -1.07
VCAM1-201ENST00000294728 ARHGAP5Q13017 1502 aa8.39□□□□□ -1.07
VCAM1-201ENST00000294728 BCANQ96GW7 911 aa8.39□□□□□ -1.07
VCAM1-201ENST00000294728 WASHC2CQ9Y4E1 1318 aa8.39□□□□□ -1.07
VCAM1-201ENST00000294728 GPRASP1Q5JY77 1395 aa8.39□□□□□ -1.07
VCAM1-201ENST00000294728 RSPH4AQ5TD94 716 aa8.39□□□□□ -1.07
VCAM1-201ENST00000294728 PLPPR3Q6T4P5 718 aa8.39□□□□□ -1.07
VCAM1-201ENST00000294728 SLC4A1APQ9BWU0 796 aaKnown RBP8.39□□□□□ -1.07
VCAM1-201ENST00000294728 PLA2R1Q13018 1463 aa8.39□□□□□ -1.07
VCAM1-201ENST00000294728 KIF15Q9NS87 1388 aa8.39□□□□□ -1.07
VCAM1-201ENST00000294728 NEURL4Q96JN8 1562 aa8.38□□□□□ -1.07
VCAM1-201ENST00000294728 CAMSAP1Q5T5Y3 1602 aa8.38□□□□□ -1.07
VCAM1-201ENST00000294728 RNF17Q9BXT8 1623 aaKnown RBP8.38□□□□□ -1.07
VCAM1-201ENST00000294728 CHIC2Q9UKJ5 165 aa8.38□□□□□ -1.07
VCAM1-201ENST00000294728 MRS2Q9HD23 443 aa8.38□□□□□ -1.07
VCAM1-201ENST00000294728 PRDM15P57071 1507 aaPredicted RBP8.38□□□□□ -1.07
VCAM1-201ENST00000294728 MYO3AQ8NEV4 1616 aa8.37□□□□□ -1.07
VCAM1-201ENST00000294728 NUDCQ9Y266 331 aa8.37□□□□□ -1.07
VCAM1-201ENST00000294728 PLEKHH2Q8IVE3 1493 aa8.37□□□□□ -1.07
VCAM1-201ENST00000294728 MSH5O43196 834 aa8.36□□□□□ -1.07
VCAM1-201ENST00000294728 RALBP1Q15311 655 aa8.36□□□□□ -1.07
VCAM1-201ENST00000294728 CCDC141Q6ZP82 1450 aa8.36□□□□□ -1.07
VCAM1-201ENST00000294728 SAMD9LQ8IVG5 1584 aa8.36□□□□□ -1.07
VCAM1-201ENST00000294728 CFDP1Q9UEE9 299 aaPredicted RBP8.36□□□□□ -1.07
VCAM1-201ENST00000294728 FAM135AQ9P2D6 1515 aa8.35□□□□□ -1.07
VCAM1-201ENST00000294728 CCDC184Q52MB2 194 aa8.35□□□□□ -1.07
VCAM1-201ENST00000294728 PNISRQ8TF01 805 aaKnown RBP8.35□□□□□ -1.07
VCAM1-201ENST00000294728 PDE3BQ13370 1112 aa8.34□□□□□ -1.07
VCAM1-201ENST00000294728 AFAP1Q8N556 730 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms