RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 ASXL2Q76L83 1435 aa19.39■□□□□ 0.69
NXF1-201ENST00000294172 MYT1LQ9UL68 1186 aa19.39■□□□□ 0.69
NXF1-201ENST00000294172 FANCAO15360 1455 aa19.39■□□□□ 0.69
NXF1-201ENST00000294172 PLA2R1Q13018 1463 aa19.39■□□□□ 0.69
NXF1-201ENST00000294172 ARAP3Q8WWN8 1544 aa19.38■□□□□ 0.69
NXF1-201ENST00000294172 IQGAP3Q86VI3 1631 aa19.38■□□□□ 0.69
NXF1-201ENST00000294172 NPM1P06748 294 aaKnown RBP eCLIP19.37■□□□□ 0.69
NXF1-201ENST00000294172 PRKRIP1Q9H875 184 aaPredicted RBP19.36■□□□□ 0.69
NXF1-201ENST00000294172 KDM5CP41229 1560 aa19.36■□□□□ 0.69
NXF1-201ENST00000294172 RTEL1-TNFRSF6BF6WH68 1400 aa19.35■□□□□ 0.69
NXF1-201ENST00000294172 MAGI2Q86UL8 1455 aa19.34■□□□□ 0.69
NXF1-201ENST00000294172 ROCK2O75116 1388 aaKnown RBP19.34■□□□□ 0.69
NXF1-201ENST00000294172 ABCA9Q8IUA7 1624 aa19.34■□□□□ 0.69
NXF1-201ENST00000294172 SUPT16HQ9Y5B9 1047 aaKnown RBP19.34■□□□□ 0.69
NXF1-201ENST00000294172 ZFYVE16Q7Z3T8 1539 aa19.33■□□□□ 0.69
NXF1-201ENST00000294172 BCORL1Q5H9F3 1711 aa19.33■□□□□ 0.69
NXF1-201ENST00000294172 POLR1AO95602 1720 aaPredicted RBP19.33■□□□□ 0.68
NXF1-201ENST00000294172 ST20-MTHFSA0A0A6YYL1 179 aa19.33■□□□□ 0.68
NXF1-201ENST00000294172 SCAPERQ9BY12 1400 aa19.32■□□□□ 0.68
NXF1-201ENST00000294172 ADGRL1O94910 1474 aa19.32■□□□□ 0.68
NXF1-201ENST00000294172 CNGB1Q14028 1251 aaPredicted RBP19.32■□□□□ 0.68
NXF1-201ENST00000294172 CCDC184Q52MB2 194 aa19.32■□□□□ 0.68
NXF1-201ENST00000294172 HNRNPUQ00839 825 aaKnown RBP eCLIP19.3■□□□□ 0.68
NXF1-201ENST00000294172 PRAG1Q86YV5 1406 aa19.3■□□□□ 0.68
NXF1-201ENST00000294172 A2MP01023 1474 aa19.28■□□□□ 0.68
NXF1-201ENST00000294172 ARID4BQ4LE39 1312 aaPredicted RBP19.28■□□□□ 0.68
NXF1-201ENST00000294172 NBPF1Q3BBV0 1214 aa19.28■□□□□ 0.68
NXF1-201ENST00000294172 MRS2Q9HD23 443 aa19.28■□□□□ 0.68
NXF1-201ENST00000294172 ATP7AQ04656 1500 aa19.27■□□□□ 0.68
NXF1-201ENST00000294172 ATP10AO60312 1499 aa19.27■□□□□ 0.68
NXF1-201ENST00000294172 KIF3BO15066 747 aa19.26■□□□□ 0.67
NXF1-201ENST00000294172 FAM9BQ8IZU0 186 aa19.25■□□□□ 0.67
NXF1-201ENST00000294172 INO80Q9ULG1 1556 aaPredicted RBP19.24■□□□□ 0.67
NXF1-201ENST00000294172 DHX29Q7Z478 1369 aaKnown RBP19.23■□□□□ 0.67
NXF1-201ENST00000294172 KANK1Q14678 1352 aa19.23■□□□□ 0.67
NXF1-201ENST00000294172 TRPM1Q7Z4N2 1603 aa19.22■□□□□ 0.67
NXF1-201ENST00000294172 E9PCH4 1651 aa19.21■□□□□ 0.67
NXF1-201ENST00000294172 CD109Q6YHK3 1445 aa19.2■□□□□ 0.66
NXF1-201ENST00000294172 FKBP8Q14318 412 aa19.19■□□□□ 0.66
NXF1-201ENST00000294172 DEPDC5O75140 1603 aa19.18■□□□□ 0.66
NXF1-201ENST00000294172 GPRASP1Q5JY77 1395 aa19.17■□□□□ 0.66
NXF1-201ENST00000294172 ZNF518AQ6AHZ1 1483 aa19.16■□□□□ 0.66
NXF1-201ENST00000294172 NEFLP07196 543 aa19.16■□□□□ 0.66
NXF1-201ENST00000294172 TRPM2O94759 1503 aa19.15■□□□□ 0.66
NXF1-201ENST00000294172 BCANQ96GW7 911 aa19.15■□□□□ 0.66
NXF1-201ENST00000294172 PTPRTO14522 1441 aa19.15■□□□□ 0.66
NXF1-201ENST00000294172 TET3O43151 1660 aa19.13■□□□□ 0.65
NXF1-201ENST00000294172 EIF2AK4Q9P2K8 1649 aaKnown RBP19.13■□□□□ 0.65
NXF1-201ENST00000294172 KIDINS220Q9ULH0 1771 aa19.12■□□□□ 0.65
NXF1-201ENST00000294172 SPHKAPQ2M3C7 1700 aa19.12■□□□□ 0.65
NXF1-201ENST00000294172 VWDEQ8N2E2 1590 aa19.11■□□□□ 0.65
NXF1-201ENST00000294172 PRDM15P57071 1507 aaPredicted RBP19.1■□□□□ 0.65
NXF1-201ENST00000294172 CLTCL1P53675 1640 aa19.1■□□□□ 0.65
NXF1-201ENST00000294172 POGZQ7Z3K3 1410 aa19.1■□□□□ 0.65
NXF1-201ENST00000294172 TESK2Q96S53 571 aa19.09■□□□□ 0.65
NXF1-201ENST00000294172 MROH1Q8NDA8 1641 aa19.09■□□□□ 0.65
NXF1-201ENST00000294172 LAMC1P11047 1609 aa19.08■□□□□ 0.64
NXF1-201ENST00000294172 CFAP74Q9C0B2 1584 aa19.08■□□□□ 0.64
NXF1-201ENST00000294172 DISP3Q9P2K9 1392 aa19.07■□□□□ 0.64
NXF1-201ENST00000294172 CYB5RLQ6IPT4 315 aa19.07■□□□□ 0.64
NXF1-201ENST00000294172 GGT6Q6P531 493 aa19.07■□□□□ 0.64
NXF1-201ENST00000294172 RAPGEF3O95398 923 aa19.07■□□□□ 0.64
NXF1-201ENST00000294172 CEP152O94986 1710 aa19.07■□□□□ 0.64
NXF1-201ENST00000294172 TMF1P82094 1093 aa19.06■□□□□ 0.64
NXF1-201ENST00000294172 TMC1Q8TDI8 760 aa19.06■□□□□ 0.64
NXF1-201ENST00000294172 MADDQ8WXG6 1647 aa19.04■□□□□ 0.64
NXF1-201ENST00000294172 COL17A1Q9UMD9 1497 aaPredicted RBP19.04■□□□□ 0.64
NXF1-201ENST00000294172 UGGT1Q9NYU2 1555 aa19.04■□□□□ 0.64
NXF1-201ENST00000294172 STAC3Q96MF2 364 aa19.04■□□□□ 0.64
NXF1-201ENST00000294172 ZBED9Q6R2W3 1325 aa19.04■□□□□ 0.64
NXF1-201ENST00000294172 MLH3Q9UHC1 1453 aa19.04■□□□□ 0.64
NXF1-201ENST00000294172 RALBP1Q15311 655 aa19.03■□□□□ 0.64
NXF1-201ENST00000294172 EFCAB6Q5THR3 1501 aa19.02■□□□□ 0.64
NXF1-201ENST00000294172 RNF17Q9BXT8 1623 aaKnown RBP19.02■□□□□ 0.64
NXF1-201ENST00000294172 HECW2Q9P2P5 1572 aa19.01■□□□□ 0.63
NXF1-201ENST00000294172 MYBBP1AQ9BQG0 1328 aaKnown RBP19.01■□□□□ 0.63
NXF1-201ENST00000294172 CHGAP10645 457 aaKnown RBP19■□□□□ 0.63
NXF1-201ENST00000294172 PPRC1Q5VV67 1664 aaKnown RBP19■□□□□ 0.63
NXF1-201ENST00000294172 PNISRQ8TF01 805 aaKnown RBP19■□□□□ 0.63
NXF1-201ENST00000294172 PANK3Q9H999 370 aa19■□□□□ 0.63
NXF1-201ENST00000294172 NEO1Q92859 1461 aa18.99■□□□□ 0.63
NXF1-201ENST00000294172 FRMPD1Q5SYB0 1578 aa18.99■□□□□ 0.63
NXF1-201ENST00000294172 KTN1Q86UP2 1357 aaKnown RBP18.99■□□□□ 0.63
NXF1-201ENST00000294172 WASHC2CQ9Y4E1 1318 aa18.99■□□□□ 0.63
NXF1-201ENST00000294172 PER1O15534 1290 aaPredicted RBP18.99■□□□□ 0.63
NXF1-201ENST00000294172 SENP3-EIF4A1A0A087X0R7 540 aa18.98■□□□□ 0.63
NXF1-201ENST00000294172 IRX6P78412 446 aaPredicted RBP18.97■□□□□ 0.63
NXF1-201ENST00000294172 LMTK2Q8IWU2 1503 aa18.97■□□□□ 0.63
NXF1-201ENST00000294172 ADGRF5Q8IZF2 1346 aa18.97■□□□□ 0.63
NXF1-201ENST00000294172 CC2D1BQ5T0F9 858 aaKnown RBP18.97■□□□□ 0.63
NXF1-201ENST00000294172 SCAF11Q99590 1463 aaKnown RBP18.97■□□□□ 0.63
NXF1-201ENST00000294172 CFAP70Q5T0N1 1121 aa18.96■□□□□ 0.63
NXF1-201ENST00000294172 ABCA6Q8N139 1617 aa18.96■□□□□ 0.63
NXF1-201ENST00000294172 BRD4O60885 1362 aaPredicted RBP18.95■□□□□ 0.62
NXF1-201ENST00000294172 NPATQ14207 1427 aa18.95■□□□□ 0.62
NXF1-201ENST00000294172 CFAP65Q6ZU64 1925 aaKnown RBP18.94■□□□□ 0.62
NXF1-201ENST00000294172 IQGAP1P46940 1657 aa18.93■□□□□ 0.62
NXF1-201ENST00000294172 KIF1BO60333 1816 aa18.93■□□□□ 0.62
NXF1-201ENST00000294172 PARD3Q8TEW0 1356 aa18.93■□□□□ 0.62
NXF1-201ENST00000294172 NLRP13Q86W25 1043 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms