RNA–Protein interactions for RNA: ENST00000288139.9

CACNA1D-201, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACNA1D, Length 9,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-201ENST00000288139 ROCK1Q13464 1354 aa10.38□□□□□ -0.75
CACNA1D-201ENST00000288139 ST18O60284 1047 aa10.37□□□□□ -0.75
CACNA1D-201ENST00000288139 AKNAQ7Z591 1439 aa10.37□□□□□ -0.75
CACNA1D-201ENST00000288139 LMOD3Q0VAK6 560 aa10.37□□□□□ -0.75
CACNA1D-201ENST00000288139 B4GALNT3Q6L9W6 998 aa10.37□□□□□ -0.75
CACNA1D-201ENST00000288139 TSR1Q2NL82 804 aaKnown RBP10.37□□□□□ -0.75
CACNA1D-201ENST00000288139 TOP2BQ02880 1626 aa10.37□□□□□ -0.75
CACNA1D-201ENST00000288139 MYOM3Q5VTT5 1437 aa10.36□□□□□ -0.75
CACNA1D-201ENST00000288139 RRP9O43818 475 aaKnown RBP10.36□□□□□ -0.75
CACNA1D-201ENST00000288139 RDXP35241 583 aaKnown RBP10.36□□□□□ -0.75
CACNA1D-201ENST00000288139 TPRNQ4KMQ1 711 aa10.36□□□□□ -0.75
CACNA1D-201ENST00000288139 CAVIN1Q6NZI2 390 aaKnown RBP10.36□□□□□ -0.75
CACNA1D-201ENST00000288139 HSP90B1P14625 803 aaKnown RBP10.36□□□□□ -0.75
CACNA1D-201ENST00000288139 PDS5BQ9NTI5 1447 aa10.35□□□□□ -0.75
CACNA1D-201ENST00000288139 GPS2Q13227 327 aa10.35□□□□□ -0.75
CACNA1D-201ENST00000288139 FAM43AQ8N2R8 423 aa10.35□□□□□ -0.75
CACNA1D-201ENST00000288139 EHBP1L1Q8N3D4 1523 aa10.35□□□□□ -0.75
CACNA1D-201ENST00000288139 P3H3Q8IVL6 736 aa10.34□□□□□ -0.75
CACNA1D-201ENST00000288139 FBXO3Q9UK99 471 aa10.34□□□□□ -0.75
CACNA1D-201ENST00000288139 PLEKHG5O94827 1062 aa10.34□□□□□ -0.75
CACNA1D-201ENST00000288139 CT47B1P0C2W7 299 aaPredicted RBP10.34□□□□□ -0.75
CACNA1D-201ENST00000288139 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.34□□□□□ -0.75
CACNA1D-201ENST00000288139 CASKIN1Q8WXD9 1431 aa10.34□□□□□ -0.75
CACNA1D-201ENST00000288139 MRE11P49959 708 aa10.33□□□□□ -0.76
CACNA1D-201ENST00000288139 ZRSR2Q15696 482 aaKnown RBP10.33□□□□□ -0.76
CACNA1D-201ENST00000288139 PRKRIP1Q9H875 184 aaPredicted RBP10.33□□□□□ -0.76
CACNA1D-201ENST00000288139 RGS3P49796 1198 aa10.33□□□□□ -0.76
CACNA1D-201ENST00000288139 AMER1Q5JTC6 1135 aaPredicted RBP10.33□□□□□ -0.76
CACNA1D-201ENST00000288139 THOC2Q8NI27 1593 aaKnown RBP10.33□□□□□ -0.76
CACNA1D-201ENST00000288139 FGD6Q6ZV73 1430 aa10.33□□□□□ -0.76
CACNA1D-201ENST00000288139 RRP7BPQ9NSQ0 103 aa10.33□□□□□ -0.76
CACNA1D-201ENST00000288139 E9PSI1 815 aa10.33□□□□□ -0.76
CACNA1D-201ENST00000288139 AQRO60306 1485 aaKnown RBP eCLIP10.33□□□□□ -0.76
CACNA1D-201ENST00000288139 REC8O95072 547 aa10.32□□□□□ -0.76
CACNA1D-201ENST00000288139 TIAM1Q13009 1591 aa10.32□□□□□ -0.76
CACNA1D-201ENST00000288139 HFM1A2PYH4 1435 aa10.32□□□□□ -0.76
CACNA1D-201ENST00000288139 KIAA1211Q6ZU35 1233 aa10.32□□□□□ -0.76
CACNA1D-201ENST00000288139 PDE4CQ08493 712 aa10.32□□□□□ -0.76
CACNA1D-201ENST00000288139 HSPA5P11021 654 aaKnown RBP10.32□□□□□ -0.76
CACNA1D-201ENST00000288139 RASSF8Q8NHQ8 419 aa10.32□□□□□ -0.76
CACNA1D-201ENST00000288139 IRX6P78412 446 aaPredicted RBP10.31□□□□□ -0.76
CACNA1D-201ENST00000288139 CHIC2Q9UKJ5 165 aa10.31□□□□□ -0.76
CACNA1D-201ENST00000288139 CUL7Q14999 1698 aa10.31□□□□□ -0.76
CACNA1D-201ENST00000288139 LRRC9Q6ZRR7 1453 aa10.31□□□□□ -0.76
CACNA1D-201ENST00000288139 WWC1Q8IX03 1113 aa10.31□□□□□ -0.76
CACNA1D-201ENST00000288139 CCDC66A2RUB6 948 aa10.31□□□□□ -0.76
CACNA1D-201ENST00000288139 STK11IPQ8N1F8 1099 aa10.31□□□□□ -0.76
CACNA1D-201ENST00000288139 NUCB2P80303 420 aa10.31□□□□□ -0.76
CACNA1D-201ENST00000288139 CIZ1Q9ULV3 898 aaPredicted RBP10.31□□□□□ -0.76
CACNA1D-201ENST00000288139 HMGXB3Q12766 1538 aa10.3□□□□□ -0.76
CACNA1D-201ENST00000288139 CENPJQ9HC77 1338 aaPredicted RBP10.3□□□□□ -0.76
CACNA1D-201ENST00000288139 HDGFP51858 240 aaKnown RBP10.3□□□□□ -0.76
CACNA1D-201ENST00000288139 HECW1Q76N89 1606 aa10.3□□□□□ -0.76
CACNA1D-201ENST00000288139 VPS53Q5VIR6 699 aa10.3□□□□□ -0.76
CACNA1D-201ENST00000288139 DHX29Q7Z478 1369 aaKnown RBP10.3□□□□□ -0.76
CACNA1D-201ENST00000288139 RRP1P56182 461 aaKnown RBP10.3□□□□□ -0.76
CACNA1D-201ENST00000288139 PDE4AP27815 886 aa10.3□□□□□ -0.76
CACNA1D-201ENST00000288139 GPATCH3Q96I76 525 aa10.3□□□□□ -0.76
CACNA1D-201ENST00000288139 USP47Q96K76 1375 aa10.3□□□□□ -0.76
CACNA1D-201ENST00000288139 MYO10Q9HD67 2058 aa10.3□□□□□ -0.76
CACNA1D-201ENST00000288139 MBD3O95983 291 aa10.3□□□□□ -0.76
CACNA1D-201ENST00000288139 SMG6Q86US8 1419 aaKnown RBP10.29□□□□□ -0.76
CACNA1D-201ENST00000288139 CWC22Q9HCG8 908 aaKnown RBP10.29□□□□□ -0.76
CACNA1D-201ENST00000288139 TEX35Q5T0J7 233 aa10.29□□□□□ -0.76
CACNA1D-201ENST00000288139 TSPYL1Q9H0U9 437 aa10.29□□□□□ -0.76
CACNA1D-201ENST00000288139 CHMP7Q8WUX9 453 aaPredicted RBP10.29□□□□□ -0.76
CACNA1D-201ENST00000288139 DIAPH3Q9NSV4 1193 aa10.29□□□□□ -0.76
CACNA1D-201ENST00000288139 CHMP5Q9NZZ3 219 aa10.29□□□□□ -0.76
CACNA1D-201ENST00000288139 KIF21AQ7Z4S6 1674 aa10.29□□□□□ -0.76
CACNA1D-201ENST00000288139 LMOD2Q6P5Q4 547 aa10.28□□□□□ -0.76
CACNA1D-201ENST00000288139 NOM1Q5C9Z4 860 aaKnown RBP10.28□□□□□ -0.76
CACNA1D-201ENST00000288139 CCDC7Q96M83 1385 aa10.28□□□□□ -0.76
CACNA1D-201ENST00000288139 MARCH6O60337 910 aa10.28□□□□□ -0.76
CACNA1D-201ENST00000288139 CTDP1Q9Y5B0 961 aaPredicted RBP10.28□□□□□ -0.76
CACNA1D-201ENST00000288139 MCM2P49736 904 aa10.28□□□□□ -0.76
CACNA1D-201ENST00000288139 CDR1P51861 262 aa10.28□□□□□ -0.76
CACNA1D-201ENST00000288139 TPM1P09493 284 aa10.27□□□□□ -0.76
CACNA1D-201ENST00000288139 ODF2Q5BJF6 829 aa10.27□□□□□ -0.76
CACNA1D-201ENST00000288139 PDCL2Q8N4E4 241 aa10.27□□□□□ -0.77
CACNA1D-201ENST00000288139 LETM1O95202 739 aaPredicted RBP10.27□□□□□ -0.77
CACNA1D-201ENST00000288139 MPHOSPH9Q99550 1183 aa10.27□□□□□ -0.77
CACNA1D-201ENST00000288139 WWC2Q6AWC2 1192 aa10.26□□□□□ -0.77
CACNA1D-201ENST00000288139 FAM184AQ8NB25 1140 aa10.26□□□□□ -0.77
CACNA1D-201ENST00000288139 CWC15Q9P013 229 aaKnown RBP10.26□□□□□ -0.77
CACNA1D-201ENST00000288139 R3HCC1Q9Y3T6 440 aaKnown RBP10.26□□□□□ -0.77
CACNA1D-201ENST00000288139 SALL2Q9Y467 1007 aaPredicted RBP10.26□□□□□ -0.77
CACNA1D-201ENST00000288139 KIF7Q2M1P5 1343 aa10.26□□□□□ -0.77
CACNA1D-201ENST00000288139 POLA1P09884 1462 aaPredicted RBP10.26□□□□□ -0.77
CACNA1D-201ENST00000288139 CCP110O43303 1012 aa10.26□□□□□ -0.77
CACNA1D-201ENST00000288139 ZNF428Q96B54 188 aa10.26□□□□□ -0.77
CACNA1D-201ENST00000288139 NEXNQ0ZGT2 675 aa10.26□□□□□ -0.77
CACNA1D-201ENST00000288139 PAF1Q8N7H5 531 aa10.25□□□□□ -0.77
CACNA1D-201ENST00000288139 FOXD1Q16676 465 aa10.25□□□□□ -0.77
CACNA1D-201ENST00000288139 DDX19BQ9UMR2 479 aa10.25□□□□□ -0.77
CACNA1D-201ENST00000288139 ARGLU1Q9NWB6 273 aaPredicted RBP10.25□□□□□ -0.77
CACNA1D-201ENST00000288139 ACBD3Q9H3P7 528 aa10.25□□□□□ -0.77
CACNA1D-201ENST00000288139 ATAD2BQ9ULI0 1458 aa10.24□□□□□ -0.77
CACNA1D-201ENST00000288139 MCM5P33992 734 aa10.24□□□□□ -0.77
CACNA1D-201ENST00000288139 APPP05067 770 aa10.24□□□□□ -0.77
CACNA1D-201ENST00000288139 TRIM34Q9BYJ4 488 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms