RNA–Protein interactions for RNA: ENST00000286448.11

VAMP7-202, Transcript of vesicle associated membrane protein 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP7, Length 2,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-202ENST00000286448 TSPY4P0CV99 314 aa17.64■□□□□ 0.41
VAMP7-202ENST00000286448 TSPY10P0CW01 314 aa17.64■□□□□ 0.41
VAMP7-202ENST00000286448 NUDCQ9Y266 331 aa17.64■□□□□ 0.41
VAMP7-202ENST00000286448 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.63■□□□□ 0.415e-7■■□□□ 12
VAMP7-202ENST00000286448 SYCP2Q9BX26 1530 aa17.62■□□□□ 0.41
VAMP7-202ENST00000286448 DCAF11Q8TEB1 546 aa17.6■□□□□ 0.41
VAMP7-202ENST00000286448 SALL2Q9Y467 1007 aaPredicted RBP17.6■□□□□ 0.41
VAMP7-202ENST00000286448 RGL3Q3MIN7 710 aa17.59■□□□□ 0.41
VAMP7-202ENST00000286448 DHX29Q7Z478 1369 aaKnown RBP17.59■□□□□ 0.41
VAMP7-202ENST00000286448 KDM5CP41229 1560 aa17.58■□□□□ 0.41
VAMP7-202ENST00000286448 IL27Q8NEV9 243 aa17.58■□□□□ 0.41
VAMP7-202ENST00000286448 PREX2Q70Z35 1606 aa17.58■□□□□ 0.4
VAMP7-202ENST00000286448 SHANK2Q9UPX8 1470 aa17.58■□□□□ 0.4
VAMP7-202ENST00000286448 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.57■□□□□ 0.4
VAMP7-202ENST00000286448 CARD11Q9BXL7 1154 aa17.56■□□□□ 0.4
VAMP7-202ENST00000286448 ARHGAP5Q13017 1502 aa17.56■□□□□ 0.4
VAMP7-202ENST00000286448 ST20-MTHFSA0A0A6YYL1 179 aa17.56■□□□□ 0.4
VAMP7-202ENST00000286448 CCDC141Q6ZP82 1450 aa17.55■□□□□ 0.4
VAMP7-202ENST00000286448 ARHGEF12Q9NZN5 1544 aa17.55■□□□□ 0.4
VAMP7-202ENST00000286448 FAM135AQ9P2D6 1515 aa17.53■□□□□ 0.4
VAMP7-202ENST00000286448 NBPF1Q3BBV0 1214 aa17.53■□□□□ 0.4
VAMP7-202ENST00000286448 ARHGEF5Q12774 1597 aa17.52■□□□□ 0.4
VAMP7-202ENST00000286448 PLEKHH2Q8IVE3 1493 aa17.52■□□□□ 0.39
VAMP7-202ENST00000286448 USP35Q9P2H5 1018 aa17.51■□□□□ 0.39
VAMP7-202ENST00000286448 PLA2R1Q13018 1463 aa17.51■□□□□ 0.39
VAMP7-202ENST00000286448 SHROOM2Q13796 1616 aa17.51■□□□□ 0.39
VAMP7-202ENST00000286448 KDM5DQ9BY66 1539 aa17.5■□□□□ 0.39
VAMP7-202ENST00000286448 RALGAPBQ86X10 1494 aa17.5■□□□□ 0.39
VAMP7-202ENST00000286448 NPM2Q86SE8 214 aaKnown RBP17.49■□□□□ 0.39
VAMP7-202ENST00000286448 RTN4Q9NQC3 1192 aaKnown RBP17.49■□□□□ 0.39
VAMP7-202ENST00000286448 NEFMP07197 916 aa17.48■□□□□ 0.39
VAMP7-202ENST00000286448 UHRF1BP1Q6BDS2 1440 aa17.47■□□□□ 0.39
VAMP7-202ENST00000286448 ABCC2Q92887 1545 aa17.47■□□□□ 0.39
VAMP7-202ENST00000286448 TCERG1O14776 1098 aaKnown RBP17.46■□□□□ 0.39
VAMP7-202ENST00000286448 LAS1LQ9Y4W2 734 aaKnown RBP17.46■□□□□ 0.39
VAMP7-202ENST00000286448 ROCK2O75116 1388 aaKnown RBP17.45■□□□□ 0.38
VAMP7-202ENST00000286448 MYO5CQ9NQX4 1742 aa17.44■□□□□ 0.38
VAMP7-202ENST00000286448 WASHC2CQ9Y4E1 1318 aa17.44■□□□□ 0.38
VAMP7-202ENST00000286448 TRAPPC8Q9Y2L5 1435 aa17.44■□□□□ 0.38
VAMP7-202ENST00000286448 PNISRQ8TF01 805 aaKnown RBP17.43■□□□□ 0.38
VAMP7-202ENST00000286448 ZCCHC11Q5TAX3 1644 aaKnown RBP17.43■□□□□ 0.38
VAMP7-202ENST00000286448 PDE4AP27815 886 aa17.43■□□□□ 0.38
VAMP7-202ENST00000286448 CCDC144AA2RUR9 1427 aa17.42■□□□□ 0.38
VAMP7-202ENST00000286448 AFAP1Q8N556 730 aa17.42■□□□□ 0.38
VAMP7-202ENST00000286448 A2MP01023 1474 aa17.42■□□□□ 0.38
VAMP7-202ENST00000286448 PPM1GO15355 546 aaPredicted RBP17.42■□□□□ 0.38
VAMP7-202ENST00000286448 RRP1P56182 461 aaKnown RBP17.41■□□□□ 0.38
VAMP7-202ENST00000286448 BACH2Q9BYV9 841 aa17.4■□□□□ 0.38
VAMP7-202ENST00000286448 PRAG1Q86YV5 1406 aa17.4■□□□□ 0.38
VAMP7-202ENST00000286448 EXOC6Q8TAG9 804 aa17.39■□□□□ 0.37
VAMP7-202ENST00000286448 TMC1Q8TDI8 760 aa17.39■□□□□ 0.37
VAMP7-202ENST00000286448 TRPM1Q7Z4N2 1603 aa17.39■□□□□ 0.37
VAMP7-202ENST00000286448 MS4A1P11836 297 aa17.38■□□□□ 0.37
VAMP7-202ENST00000286448 UNC13BO14795 1591 aa17.38■□□□□ 0.37
VAMP7-202ENST00000286448 LRPPRCP42704 1394 aaKnown RBP17.37■□□□□ 0.37
VAMP7-202ENST00000286448 ARID4BQ4LE39 1312 aaPredicted RBP17.36■□□□□ 0.37
VAMP7-202ENST00000286448 DISP3Q9P2K9 1392 aa17.36■□□□□ 0.37
VAMP7-202ENST00000286448 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.36■□□□□ 0.37
VAMP7-202ENST00000286448 CLASP1Q7Z460 1538 aa17.35■□□□□ 0.37
VAMP7-202ENST00000286448 MAST1Q9Y2H9 1570 aa17.35■□□□□ 0.37
VAMP7-202ENST00000286448 PLCH2O75038 1416 aa17.34■□□□□ 0.37
VAMP7-202ENST00000286448 IQGAP3Q86VI3 1631 aa17.33■□□□□ 0.37
VAMP7-202ENST00000286448 RCAN3Q9UKA8 241 aa17.33■□□□□ 0.36
VAMP7-202ENST00000286448 E9PCH4 1651 aa17.33■□□□□ 0.36
VAMP7-202ENST00000286448 PLXNC1O60486 1568 aa17.32■□□□□ 0.36
VAMP7-202ENST00000286448 ABCC1P33527 1531 aa17.32■□□□□ 0.36
VAMP7-202ENST00000286448 CC2D1BQ5T0F9 858 aaKnown RBP17.32■□□□□ 0.36
VAMP7-202ENST00000286448 RSPH4AQ5TD94 716 aa17.32■□□□□ 0.36
VAMP7-202ENST00000286448 TESK2Q96S53 571 aa17.31■□□□□ 0.36
VAMP7-202ENST00000286448 BRD4O60885 1362 aaPredicted RBP17.31■□□□□ 0.36
VAMP7-202ENST00000286448 EFCAB2Q5VUJ9 269 aa17.31■□□□□ 0.36
VAMP7-202ENST00000286448 DDRGK1Q96HY6 314 aa17.31■□□□□ 0.36
VAMP7-202ENST00000286448 GSE1Q14687 1217 aa17.3■□□□□ 0.36
VAMP7-202ENST00000286448 BRPF3Q9ULD4 1205 aa17.29■□□□□ 0.36
VAMP7-202ENST00000286448 DUOX2Q9NRD8 1548 aa17.29■□□□□ 0.36
VAMP7-202ENST00000286448 MYBBP1AQ9BQG0 1328 aaKnown RBP17.27■□□□□ 0.36
VAMP7-202ENST00000286448 SPAG9O60271 1321 aaKnown RBP17.27■□□□□ 0.36
VAMP7-202ENST00000286448 KTN1Q86UP2 1357 aaKnown RBP17.27■□□□□ 0.35
VAMP7-202ENST00000286448 PER1O15534 1290 aaPredicted RBP17.26■□□□□ 0.35
VAMP7-202ENST00000286448 MAGI2Q86UL8 1455 aa17.26■□□□□ 0.35
VAMP7-202ENST00000286448 PANK3Q9H999 370 aa17.25■□□□□ 0.35
VAMP7-202ENST00000286448 PDE3BQ13370 1112 aa17.24■□□□□ 0.35
VAMP7-202ENST00000286448 UGGT1Q9NYU2 1555 aa17.24■□□□□ 0.35
VAMP7-202ENST00000286448 PRDM15P57071 1507 aaPredicted RBP17.24■□□□□ 0.35
VAMP7-202ENST00000286448 ZFYVE16Q7Z3T8 1539 aa17.24■□□□□ 0.35
VAMP7-202ENST00000286448 RALBP1Q15311 655 aa17.24■□□□□ 0.35
VAMP7-202ENST00000286448 NFKBIBQ15653 356 aa17.24■□□□□ 0.35
VAMP7-202ENST00000286448 UBE2Q2Q8WVN8 375 aa17.24■□□□□ 0.35
VAMP7-202ENST00000286448 ERBINQ96RT1 1412 aa17.24■□□□□ 0.35
VAMP7-202ENST00000286448 COL17A1Q9UMD9 1497 aaPredicted RBP17.23■□□□□ 0.35
VAMP7-202ENST00000286448 GPRASP1Q5JY77 1395 aa17.23■□□□□ 0.35
VAMP7-202ENST00000286448 ATP10AO60312 1499 aa17.22■□□□□ 0.35
VAMP7-202ENST00000286448 CDCA7LQ96GN5 454 aa17.21■□□□□ 0.35
VAMP7-202ENST00000286448 UHRF1BP1LA0JNW5 1464 aa17.21■□□□□ 0.34
VAMP7-202ENST00000286448 SCAPERQ9BY12 1400 aa17.21■□□□□ 0.34
VAMP7-202ENST00000286448 KIF3BO15066 747 aa17.2■□□□□ 0.34
VAMP7-202ENST00000286448 PARD3Q8TEW0 1356 aa17.2■□□□□ 0.34
VAMP7-202ENST00000286448 CLTCL1P53675 1640 aa17.2■□□□□ 0.34
VAMP7-202ENST00000286448 FRAT1Q92837 279 aaPredicted RBP17.19■□□□□ 0.34
VAMP7-202ENST00000286448 FANCAO15360 1455 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms