RNA–Protein interactions for RNA: ENST00000286428.5

VBP1-201, Transcript of VHL binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VBP1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-201ENST00000286428 MIER1Q8N108 512 aa26.74■■□□□ 1.87
VBP1-201ENST00000286428 EIF2AK4Q9P2K8 1649 aaKnown RBP26.74■■□□□ 1.87
VBP1-201ENST00000286428 ATP10AO60312 1499 aa26.73■■□□□ 1.87
VBP1-201ENST00000286428 KDM5CP41229 1560 aa26.72■■□□□ 1.87
VBP1-201ENST00000286428 KIF3BO15066 747 aa26.7■■□□□ 1.87
VBP1-201ENST00000286428 MAP3K4Q9Y6R4 1608 aa26.7■■□□□ 1.86
VBP1-201ENST00000286428 DEPDC5O75140 1603 aa26.68■■□□□ 1.86
VBP1-201ENST00000286428 UHRF1BP1Q6BDS2 1440 aa26.68■■□□□ 1.86
VBP1-201ENST00000286428 NBPF8Q3BBV2 869 aa26.67■■□□□ 1.86
VBP1-201ENST00000286428 A2MP01023 1474 aa26.67■■□□□ 1.86
VBP1-201ENST00000286428 FAM69CQ0P6D2 419 aa26.66■■□□□ 1.86
VBP1-201ENST00000286428 KIDINS220Q9ULH0 1771 aa26.66■■□□□ 1.86
VBP1-201ENST00000286428 HSPA5P11021 654 aaKnown RBP26.65■■□□□ 1.86
VBP1-201ENST00000286428 HECW2Q9P2P5 1572 aa26.64■■□□□ 1.86
VBP1-201ENST00000286428 PLA2R1Q13018 1463 aa26.62■■□□□ 1.85
VBP1-201ENST00000286428 DDX10Q13206 875 aaKnown RBP26.61■■□□□ 1.85
VBP1-201ENST00000286428 HIRIP3Q9BW71 556 aaPredicted RBP26.61■■□□□ 1.85
VBP1-201ENST00000286428 VWDEQ8N2E2 1590 aa26.61■■□□□ 1.85
VBP1-201ENST00000286428 DCAF11Q8TEB1 546 aa26.6■■□□□ 1.85
VBP1-201ENST00000286428 PRDM15P57071 1507 aaPredicted RBP26.6■■□□□ 1.85
VBP1-201ENST00000286428 STAC3Q96MF2 364 aa26.6■■□□□ 1.85
VBP1-201ENST00000286428 TET3O43151 1660 aa26.58■■□□□ 1.85
VBP1-201ENST00000286428 DIP2BQ9P265 1576 aa26.58■■□□□ 1.85
VBP1-201ENST00000286428 CENPBP07199 599 aaPredicted RBP26.57■■□□□ 1.84
VBP1-201ENST00000286428 RAPGEF3O95398 923 aa26.56■■□□□ 1.84
VBP1-201ENST00000286428 ZNF326Q5BKZ1 582 aaKnown RBP26.56■■□□□ 1.84
VBP1-201ENST00000286428 PTPRTO14522 1441 aa26.55■■□□□ 1.84
VBP1-201ENST00000286428 RALGAPBQ86X10 1494 aa26.54■■□□□ 1.84
VBP1-201ENST00000286428 LMTK2Q8IWU2 1503 aa26.53■■□□□ 1.84
VBP1-201ENST00000286428 KDM2AQ9Y2K7 1162 aa26.53■■□□□ 1.84
VBP1-201ENST00000286428 TRPM2O94759 1503 aa26.52■■□□□ 1.84
VBP1-201ENST00000286428 SPATA31E1Q6ZUB1 1445 aa26.51■■□□□ 1.84
VBP1-201ENST00000286428 RNF17Q9BXT8 1623 aaKnown RBP26.51■■□□□ 1.83
VBP1-201ENST00000286428 E9PCH4 1651 aa26.5■■□□□ 1.83
VBP1-201ENST00000286428 BCORL1Q5H9F3 1711 aa26.49■■□□□ 1.83
VBP1-201ENST00000286428 RGL3Q3MIN7 710 aa26.49■■□□□ 1.83
VBP1-201ENST00000286428 MROH1Q8NDA8 1641 aa26.48■■□□□ 1.83
VBP1-201ENST00000286428 ANP32CO43423 234 aa26.47■■□□□ 1.83
VBP1-201ENST00000286428 CARD11Q9BXL7 1154 aa26.47■■□□□ 1.83
VBP1-201ENST00000286428 RICTORQ6R327 1708 aa26.47■■□□□ 1.83
VBP1-201ENST00000286428 ARID4BQ4LE39 1312 aaPredicted RBP26.46■■□□□ 1.83
VBP1-201ENST00000286428 USP47Q96K76 1375 aa26.45■■□□□ 1.83
VBP1-201ENST00000286428 ABCA6Q8N139 1617 aa26.45■■□□□ 1.83
VBP1-201ENST00000286428 FRMPD1Q5SYB0 1578 aa26.45■■□□□ 1.82
VBP1-201ENST00000286428 PRAG1Q86YV5 1406 aa26.45■■□□□ 1.82
VBP1-201ENST00000286428 SPHKAPQ2M3C7 1700 aa26.44■■□□□ 1.82
VBP1-201ENST00000286428 EFCAB6Q5THR3 1501 aa26.44■■□□□ 1.82
VBP1-201ENST00000286428 GGT6Q6P531 493 aa26.44■■□□□ 1.82
VBP1-201ENST00000286428 WASHC2AQ641Q2 1341 aa26.43■■□□□ 1.82
VBP1-201ENST00000286428 NEURL4Q96JN8 1562 aa26.43■■□□□ 1.82
VBP1-201ENST00000286428 ROCK2O75116 1388 aaKnown RBP26.43■■□□□ 1.82
VBP1-201ENST00000286428 ZMYM4Q5VZL5 1548 aa26.42■■□□□ 1.82
VBP1-201ENST00000286428 WASHC2CQ9Y4E1 1318 aa26.42■■□□□ 1.82
VBP1-201ENST00000286428 DIP2CQ9Y2E4 1556 aa26.42■■□□□ 1.82
VBP1-201ENST00000286428 CCDC7Q96M83 1385 aa26.39■■□□□ 1.82
VBP1-201ENST00000286428 CCER2I3L3R5 266 aa26.36■■□□□ 1.81
VBP1-201ENST00000286428 GPRASP1Q5JY77 1395 aa26.35■■□□□ 1.81
VBP1-201ENST00000286428 CEP152O94986 1710 aa26.35■■□□□ 1.81
VBP1-201ENST00000286428 PPP6R1Q9UPN7 881 aa26.34■■□□□ 1.81
VBP1-201ENST00000286428 CNTLNQ9NXG0 1405 aa26.32■■□□□ 1.8
VBP1-201ENST00000286428 CLTCL1P53675 1640 aa26.32■■□□□ 1.8
VBP1-201ENST00000286428 PPRC1Q5VV67 1664 aaKnown RBP26.32■■□□□ 1.8
VBP1-201ENST00000286428 YEATS2Q9ULM3 1422 aa26.32■■□□□ 1.8
VBP1-201ENST00000286428 ABCC3O15438 1527 aa26.32■■□□□ 1.8
VBP1-201ENST00000286428 TRPM1Q7Z4N2 1603 aa26.31■■□□□ 1.8
VBP1-201ENST00000286428 KIF7Q2M1P5 1343 aa26.3■■□□□ 1.8
VBP1-201ENST00000286428 NPATQ14207 1427 aa26.3■■□□□ 1.8
VBP1-201ENST00000286428 ARHGAP31Q2M1Z3 1444 aa26.3■■□□□ 1.8
VBP1-201ENST00000286428 YTHDC1Q96MU7 727 aaKnown RBP26.29■■□□□ 1.8
VBP1-201ENST00000286428 LAMC1P11047 1609 aa26.29■■□□□ 1.8
VBP1-201ENST00000286428 REREQ9P2R6 1566 aa26.28■■□□□ 1.8
VBP1-201ENST00000286428 TSPOAP1O95153 1857 aa26.28■■□□□ 1.8
VBP1-201ENST00000286428 ZC3H13Q5T200 1668 aaKnown RBP26.28■■□□□ 1.8
VBP1-201ENST00000286428 C11orf95C9JLR9 678 aaPredicted RBP26.28■■□□□ 1.8
VBP1-201ENST00000286428 POLR1AO95602 1720 aaPredicted RBP26.27■■□□□ 1.8
VBP1-201ENST00000286428 ST20-MTHFSA0A0A6YYL1 179 aa26.25■■□□□ 1.79
VBP1-201ENST00000286428 AGLP35573 1532 aa26.24■■□□□ 1.79
VBP1-201ENST00000286428 RPGRIP1LQ68CZ1 1315 aa26.22■■□□□ 1.79
VBP1-201ENST00000286428 KIF1BO60333 1816 aa26.22■■□□□ 1.79
VBP1-201ENST00000286428 KIF13AQ9H1H9 1805 aa26.22■■□□□ 1.79
VBP1-201ENST00000286428 NBPF1Q3BBV0 1214 aa26.22■■□□□ 1.79
VBP1-201ENST00000286428 MYOM2P54296 1465 aa26.21■■□□□ 1.79
VBP1-201ENST00000286428 CAMSAP1Q5T5Y3 1602 aa26.21■■□□□ 1.79
VBP1-201ENST00000286428 NOS1P29475 1434 aa26.2■■□□□ 1.78
VBP1-201ENST00000286428 SLC24A1O60721 1099 aa26.19■■□□□ 1.78
VBP1-201ENST00000286428 SLC52A1Q9NWF4 448 aa26.19■■□□□ 1.78
VBP1-201ENST00000286428 MADDQ8WXG6 1647 aa26.17■■□□□ 1.78
VBP1-201ENST00000286428 CHGAP10645 457 aaKnown RBP26.14■■□□□ 1.78
VBP1-201ENST00000286428 ADGRB3O60242 1522 aa26.14■■□□□ 1.77
VBP1-201ENST00000286428 UGGT1Q9NYU2 1555 aa26.13■■□□□ 1.77
VBP1-201ENST00000286428 KIAA1210Q9ULL0 1709 aa26.12■■□□□ 1.77
VBP1-201ENST00000286428 EIF3AQ14152 1382 aaKnown RBP26.12■■□□□ 1.77
VBP1-201ENST00000286428 TMF1P82094 1093 aa26.11■■□□□ 1.77
VBP1-201ENST00000286428 POLR3GLQ9BT43 218 aa26.11■■□□□ 1.77
VBP1-201ENST00000286428 SCAF11Q99590 1463 aaKnown RBP26.1■■□□□ 1.77
VBP1-201ENST00000286428 ARHGEF40Q8TER5 1519 aa26.09■■□□□ 1.77
VBP1-201ENST00000286428 CDCA8Q53HL2 280 aa26.08■■□□□ 1.77
VBP1-201ENST00000286428 COL17A1Q9UMD9 1497 aaPredicted RBP26.08■■□□□ 1.76
VBP1-201ENST00000286428 PRKRIP1Q9H875 184 aaPredicted RBP26.07■■□□□ 1.76
VBP1-201ENST00000286428 NRXN1Q9ULB1 1477 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms