RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 NCOA1Q15788 1441 aa10.69□□□□□ -0.7
TRIM42-201ENST00000286349 KDM6BO15054 1643 aa10.69□□□□□ -0.7
TRIM42-201ENST00000286349 SIN3AQ96ST3 1273 aa10.69□□□□□ -0.7
TRIM42-201ENST00000286349 ADGBQ8N7X0 1667 aa10.69□□□□□ -0.7
TRIM42-201ENST00000286349 ADGRL2O95490 1459 aa10.68□□□□□ -0.7
TRIM42-201ENST00000286349 SHANK2Q9UPX8 1470 aa10.68□□□□□ -0.7
TRIM42-201ENST00000286349 ZMYM4Q5VZL5 1548 aa10.68□□□□□ -0.7
TRIM42-201ENST00000286349 PPP1R15AO75807 674 aaPredicted RBP10.67□□□□□ -0.7
TRIM42-201ENST00000286349 MAST1Q9Y2H9 1570 aa10.67□□□□□ -0.7
TRIM42-201ENST00000286349 ZFYVE16Q7Z3T8 1539 aa10.67□□□□□ -0.7
TRIM42-201ENST00000286349 CROCC2H7BZ55 1655 aa10.67□□□□□ -0.7
TRIM42-201ENST00000286349 KIDINS220Q9ULH0 1771 aa10.67□□□□□ -0.7
TRIM42-201ENST00000286349 INO80Q9ULG1 1556 aaPredicted RBP10.66□□□□□ -0.7
TRIM42-201ENST00000286349 MYT1LQ9UL68 1186 aa10.66□□□□□ -0.7
TRIM42-201ENST00000286349 ATP7AQ04656 1500 aa10.66□□□□□ -0.7
TRIM42-201ENST00000286349 MAGI2Q86UL8 1455 aa10.66□□□□□ -0.7
TRIM42-201ENST00000286349 TRIM52Q96A61 297 aa10.65□□□□□ -0.7
TRIM42-201ENST00000286349 ANKRD30AQ9BXX3 1397 aa10.65□□□□□ -0.7
TRIM42-201ENST00000286349 KIF15Q9NS87 1388 aa10.65□□□□□ -0.7
TRIM42-201ENST00000286349 HECW2Q9P2P5 1572 aa10.64□□□□□ -0.71
TRIM42-201ENST00000286349 AMER1Q5JTC6 1135 aaPredicted RBP10.64□□□□□ -0.71
TRIM42-201ENST00000286349 PDE4CQ08493 712 aa10.63□□□□□ -0.71
TRIM42-201ENST00000286349 ERICH6BQ5W0A0 696 aa10.63□□□□□ -0.71
TRIM42-201ENST00000286349 MPHOSPH9Q99550 1183 aa10.63□□□□□ -0.71
TRIM42-201ENST00000286349 ABCA6Q8N139 1617 aa10.63□□□□□ -0.71
TRIM42-201ENST00000286349 DHX29Q7Z478 1369 aaKnown RBP10.63□□□□□ -0.71
TRIM42-201ENST00000286349 ATP10AO60312 1499 aa10.63□□□□□ -0.71
TRIM42-201ENST00000286349 DIP2CQ9Y2E4 1556 aa10.63□□□□□ -0.71
TRIM42-201ENST00000286349 MIER1Q8N108 512 aa10.63□□□□□ -0.71
TRIM42-201ENST00000286349 TULP1O00294 542 aaPredicted RBP10.62□□□□□ -0.71
TRIM42-201ENST00000286349 A2MP01023 1474 aa10.62□□□□□ -0.71
TRIM42-201ENST00000286349 PLXNC1O60486 1568 aa10.61□□□□□ -0.71
TRIM42-201ENST00000286349 SIGLEC1Q9BZZ2 1709 aa10.61□□□□□ -0.71
TRIM42-201ENST00000286349 ARHGEF40Q8TER5 1519 aa10.6□□□□□ -0.71
TRIM42-201ENST00000286349 ANKRD50Q9ULJ7 1429 aa10.6□□□□□ -0.71
TRIM42-201ENST00000286349 DUOX2Q9NRD8 1548 aa10.59□□□□□ -0.71
TRIM42-201ENST00000286349 KIF3BO15066 747 aa10.59□□□□□ -0.71
TRIM42-201ENST00000286349 ANKRD30BQ9BXX2 1392 aa10.58□□□□□ -0.72
TRIM42-201ENST00000286349 RPRD2Q5VT52 1461 aaKnown RBP10.57□□□□□ -0.72
TRIM42-201ENST00000286349 SLC4A1APQ9BWU0 796 aaKnown RBP10.57□□□□□ -0.72
TRIM42-201ENST00000286349 ERBINQ96RT1 1412 aa10.57□□□□□ -0.72
TRIM42-201ENST00000286349 REREQ9P2R6 1566 aa10.57□□□□□ -0.72
TRIM42-201ENST00000286349 KDM5DQ9BY66 1539 aa10.56□□□□□ -0.72
TRIM42-201ENST00000286349 AGLP35573 1532 aa10.55□□□□□ -0.72
TRIM42-201ENST00000286349 PZPP20742 1482 aa10.55□□□□□ -0.72
TRIM42-201ENST00000286349 MLECQ14165 292 aa10.55□□□□□ -0.72
TRIM42-201ENST00000286349 GGT6Q6P531 493 aa10.55□□□□□ -0.72
TRIM42-201ENST00000286349 ARID4BQ4LE39 1312 aaPredicted RBP10.55□□□□□ -0.72
TRIM42-201ENST00000286349 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.54□□□□□ -0.72
TRIM42-201ENST00000286349 MROH1Q8NDA8 1641 aa10.52□□□□□ -0.72
TRIM42-201ENST00000286349 NUP155O75694 1391 aa10.52□□□□□ -0.73
TRIM42-201ENST00000286349 BCORL1Q5H9F3 1711 aa10.51□□□□□ -0.73
TRIM42-201ENST00000286349 EIF2AK4Q9P2K8 1649 aaKnown RBP10.5□□□□□ -0.73
TRIM42-201ENST00000286349 L3MBTL2Q969R5 705 aa10.5□□□□□ -0.73
TRIM42-201ENST00000286349 RNF17Q9BXT8 1623 aaKnown RBP10.5□□□□□ -0.73
TRIM42-201ENST00000286349 VWDEQ8N2E2 1590 aa10.49□□□□□ -0.73
TRIM42-201ENST00000286349 SALL2Q9Y467 1007 aaPredicted RBP10.49□□□□□ -0.73
TRIM42-201ENST00000286349 DEPDC5O75140 1603 aa10.49□□□□□ -0.73
TRIM42-201ENST00000286349 KDM4FA0A1W2PPD8 638 aa10.49□□□□□ -0.73
TRIM42-201ENST00000286349 TAF7LQ5H9L4 462 aa10.49□□□□□ -0.73
TRIM42-201ENST00000286349 WASHC2CQ9Y4E1 1318 aa10.49□□□□□ -0.73
TRIM42-201ENST00000286349 UNC13BO14795 1591 aa10.48□□□□□ -0.73
TRIM42-201ENST00000286349 EIF4G2P78344 907 aaKnown RBP eCLIP10.48□□□□□ -0.73
TRIM42-201ENST00000286349 FGD1P98174 961 aa10.48□□□□□ -0.73
TRIM42-201ENST00000286349 PPP6R1Q9UPN7 881 aa10.48□□□□□ -0.73
TRIM42-201ENST00000286349 PRDM15P57071 1507 aaPredicted RBP10.48□□□□□ -0.73
TRIM42-201ENST00000286349 PKD2Q13563 968 aa10.48□□□□□ -0.73
TRIM42-201ENST00000286349 FOXD1Q16676 465 aa10.48□□□□□ -0.73
TRIM42-201ENST00000286349 YTHDC1Q96MU7 727 aaKnown RBP10.48□□□□□ -0.73
TRIM42-201ENST00000286349 DDX10Q13206 875 aaKnown RBP10.47□□□□□ -0.73
TRIM42-201ENST00000286349 ABCC3O15438 1527 aa10.47□□□□□ -0.73
TRIM42-201ENST00000286349 CEBPAP49715 358 aaPredicted RBP10.46□□□□□ -0.74
TRIM42-201ENST00000286349 FAM135AQ9P2D6 1515 aa10.46□□□□□ -0.74
TRIM42-201ENST00000286349 CCER2I3L3R5 266 aa10.45□□□□□ -0.74
TRIM42-201ENST00000286349 ANP32CO43423 234 aa10.45□□□□□ -0.74
TRIM42-201ENST00000286349 ZMYM3Q14202 1370 aa10.45□□□□□ -0.74
TRIM42-201ENST00000286349 KANK1Q14678 1352 aa10.45□□□□□ -0.74
TRIM42-201ENST00000286349 LMTK2Q8IWU2 1503 aa10.45□□□□□ -0.74
TRIM42-201ENST00000286349 FBXO31Q5XUX0 539 aaPredicted RBP10.45□□□□□ -0.74
TRIM42-201ENST00000286349 ADAMTSL3P82987 1691 aa10.44□□□□□ -0.74
TRIM42-201ENST00000286349 NPM2Q86SE8 214 aaKnown RBP10.44□□□□□ -0.74
TRIM42-201ENST00000286349 IQGAP3Q86VI3 1631 aa10.44□□□□□ -0.74
TRIM42-201ENST00000286349 HSPA5P11021 654 aaKnown RBP10.44□□□□□ -0.74
TRIM42-201ENST00000286349 NPATQ14207 1427 aa10.43□□□□□ -0.74
TRIM42-201ENST00000286349 UHRF1BP1Q6BDS2 1440 aa10.42□□□□□ -0.74
TRIM42-201ENST00000286349 PLA2R1Q13018 1463 aa10.42□□□□□ -0.74
TRIM42-201ENST00000286349 MADDQ8WXG6 1647 aa10.42□□□□□ -0.74
TRIM42-201ENST00000286349 ARHGAP31Q2M1Z3 1444 aa10.41□□□□□ -0.74
TRIM42-201ENST00000286349 CLTCQ00610 1675 aaKnown RBP10.41□□□□□ -0.74
TRIM42-201ENST00000286349 HIRIP3Q9BW71 556 aaPredicted RBP10.41□□□□□ -0.74
TRIM42-201ENST00000286349 ESF1Q9H501 851 aaKnown RBP10.41□□□□□ -0.74
TRIM42-201ENST00000286349 CEP152O94986 1710 aa10.41□□□□□ -0.74
TRIM42-201ENST00000286349 CNTLNQ9NXG0 1405 aa10.4□□□□□ -0.74
TRIM42-201ENST00000286349 EFCAB6Q5THR3 1501 aa10.4□□□□□ -0.74
TRIM42-201ENST00000286349 NBPF8Q3BBV2 869 aa10.4□□□□□ -0.75
TRIM42-201ENST00000286349 SPATA31E1Q6ZUB1 1445 aa10.4□□□□□ -0.75
TRIM42-201ENST00000286349 E9PCH4 1651 aa10.39□□□□□ -0.75
TRIM42-201ENST00000286349 TET3O43151 1660 aa10.39□□□□□ -0.75
TRIM42-201ENST00000286349 CAMSAP1Q5T5Y3 1602 aa10.39□□□□□ -0.75
TRIM42-201ENST00000286349 PTPRTO14522 1441 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms