RNA–Protein interactions for RNA: ENST00000275575.11

PHTF2-202, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene PHTF2, Length 4,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-202ENST00000275575 SPHKAPQ2M3C7 1700 aa6.29□□□□□ -1.4
PHTF2-202ENST00000275575 NALCNQ8IZF0 1738 aa6.28□□□□□ -1.4
PHTF2-202ENST00000275575 SHPRHQ149N8 1683 aa6.28□□□□□ -1.4
PHTF2-202ENST00000275575 LRRC9Q6ZRR7 1453 aa6.27□□□□□ -1.41
PHTF2-202ENST00000275575 COL22A1Q8NFW1 1626 aaPredicted RBP6.27□□□□□ -1.41
PHTF2-202ENST00000275575 ARHGAP31Q2M1Z3 1444 aa6.27□□□□□ -1.41
PHTF2-202ENST00000275575 SUPT5HO00267 1087 aaKnown RBP6.26□□□□□ -1.41
PHTF2-202ENST00000275575 COL16A1Q07092 1604 aaPredicted RBP6.26□□□□□ -1.41
PHTF2-202ENST00000275575 COL24A1Q17RW2 1714 aa6.26□□□□□ -1.41
PHTF2-202ENST00000275575 CSRNP3Q8WYN3 585 aa6.26□□□□□ -1.41
PHTF2-202ENST00000275575 SRCAPQ6ZRS2 3230 aa6.24□□□□□ -1.41
PHTF2-202ENST00000275575 CHIC1Q5VXU3 224 aa6.24□□□□□ -1.41
PHTF2-202ENST00000275575 ZFYVE9O95405 1425 aa6.24□□□□□ -1.41
PHTF2-202ENST00000275575 CLIP1P30622 1438 aa6.24□□□□□ -1.41
PHTF2-202ENST00000275575 USP54Q70EL1 1684 aa6.23□□□□□ -1.41
PHTF2-202ENST00000275575 NOS1P29475 1434 aa6.23□□□□□ -1.41
PHTF2-202ENST00000275575 SETBP1Q9Y6X0 1596 aa6.23□□□□□ -1.41
PHTF2-202ENST00000275575 ARHGAP5Q13017 1502 aa6.22□□□□□ -1.41
PHTF2-202ENST00000275575 SCAPERQ9BY12 1400 aa6.22□□□□□ -1.41
PHTF2-202ENST00000275575 USP32Q8NFA0 1604 aa6.22□□□□□ -1.41
PHTF2-202ENST00000275575 A2ML1A8K2U0 1454 aa6.21□□□□□ -1.41
PHTF2-202ENST00000275575 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.21□□□□□ -1.41
PHTF2-202ENST00000275575 WNK3Q9BYP7 1800 aa6.21□□□□□ -1.42
PHTF2-202ENST00000275575 TRPM3Q9HCF6 1732 aaPredicted RBP6.21□□□□□ -1.42
PHTF2-202ENST00000275575 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.21□□□□□ -1.42
PHTF2-202ENST00000275575 UTRNP46939 3433 aa6.21□□□□□ -1.42
PHTF2-202ENST00000275575 A2MP01023 1474 aa6.21□□□□□ -1.42
PHTF2-202ENST00000275575 ERVK-7P63135 1459 aa6.2□□□□□ -1.42
PHTF2-202ENST00000275575 ADGRB3O60242 1522 aa6.2□□□□□ -1.42
PHTF2-202ENST00000275575 ASXL1Q8IXJ9 1541 aa6.2□□□□□ -1.42
PHTF2-202ENST00000275575 RAPGEF3O95398 923 aa6.2□□□□□ -1.42
PHTF2-202ENST00000275575 CLTCL1P53675 1640 aa6.2□□□□□ -1.42
PHTF2-202ENST00000275575 TOPAZ1Q8N9V7 1692 aa6.2□□□□□ -1.42
PHTF2-202ENST00000275575 MED1Q15648 1581 aaPredicted RBP6.2□□□□□ -1.42
PHTF2-202ENST00000275575 NEXMIFQ5QGS0 1516 aa6.19□□□□□ -1.42
PHTF2-202ENST00000275575 NRAPQ86VF7 1730 aa6.19□□□□□ -1.42
PHTF2-202ENST00000275575 DUOX2Q9NRD8 1548 aa6.19□□□□□ -1.42
PHTF2-202ENST00000275575 ABCC5O15440 1437 aa6.18□□□□□ -1.42
PHTF2-202ENST00000275575 AHDC1Q5TGY3 1603 aaPredicted RBP6.18□□□□□ -1.42
PHTF2-202ENST00000275575 RGPD8O14715 1765 aaPredicted RBP6.18□□□□□ -1.42
PHTF2-202ENST00000275575 LRRC7Q96NW7 1537 aa6.18□□□□□ -1.42
PHTF2-202ENST00000275575 QRICH2Q9H0J4 1663 aa6.18□□□□□ -1.42
PHTF2-202ENST00000275575 CCDC141Q6ZP82 1450 aa6.18□□□□□ -1.42
PHTF2-202ENST00000275575 ROBO1Q9Y6N7 1651 aa6.17□□□□□ -1.42
PHTF2-202ENST00000275575 ILDR1Q86SU0 546 aaPredicted RBP6.17□□□□□ -1.42
PHTF2-202ENST00000275575 MIA2Q96PC5 1412 aa6.17□□□□□ -1.42
PHTF2-202ENST00000275575 VPS8Q8N3P4 1428 aa6.16□□□□□ -1.42
PHTF2-202ENST00000275575 CPS1P31327 1500 aa6.16□□□□□ -1.42
PHTF2-202ENST00000275575 PLEKHH2Q8IVE3 1493 aa6.16□□□□□ -1.42
PHTF2-202ENST00000275575 NRXN1Q9ULB1 1477 aa6.16□□□□□ -1.42
PHTF2-202ENST00000275575 ERBINQ96RT1 1412 aa6.15□□□□□ -1.42
PHTF2-202ENST00000275575 TRHP20396 242 aaPredicted RBP6.15□□□□□ -1.42
PHTF2-202ENST00000275575 KIF1AQ12756 1690 aa6.15□□□□□ -1.42
PHTF2-202ENST00000275575 ALS2Q96Q42 1657 aa6.15□□□□□ -1.42
PHTF2-202ENST00000275575 CFAP65Q6ZU64 1925 aaKnown RBP6.15□□□□□ -1.42
PHTF2-202ENST00000275575 CNTLNQ9NXG0 1405 aa6.15□□□□□ -1.43
PHTF2-202ENST00000275575 NLRP1Q9C000 1473 aa6.14□□□□□ -1.43
PHTF2-202ENST00000275575 DHX29Q7Z478 1369 aaKnown RBP6.13□□□□□ -1.43
PHTF2-202ENST00000275575 FMN2Q9NZ56 1722 aa6.13□□□□□ -1.43
PHTF2-202ENST00000275575 BRWD3Q6RI45 1802 aa6.13□□□□□ -1.43
PHTF2-202ENST00000275575 RPRD2Q5VT52 1461 aaKnown RBP6.12□□□□□ -1.43
PHTF2-202ENST00000275575 ADGRB2O60241 1585 aa6.12□□□□□ -1.43
PHTF2-202ENST00000275575 TRPM2O94759 1503 aa6.12□□□□□ -1.43
PHTF2-202ENST00000275575 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.11□□□□□ -1.43
PHTF2-202ENST00000275575 DAPK1P53355 1430 aa6.11□□□□□ -1.43
PHTF2-202ENST00000275575 MYOM3Q5VTT5 1437 aa6.11□□□□□ -1.43
PHTF2-202ENST00000275575 TNS1Q9HBL0 1735 aaKnown RBP6.11□□□□□ -1.43
PHTF2-202ENST00000275575 KIF1BO60333 1816 aa6.11□□□□□ -1.43
PHTF2-202ENST00000275575 NRKQ7Z2Y5 1582 aa6.11□□□□□ -1.43
PHTF2-202ENST00000275575 PEAK1Q9H792 1746 aa6.1□□□□□ -1.43
PHTF2-202ENST00000275575 ADAMTS13Q76LX8 1427 aa6.1□□□□□ -1.43
PHTF2-202ENST00000275575 ZMYM3Q14202 1370 aa6.1□□□□□ -1.43
PHTF2-202ENST00000275575 ARHGEF28Q8N1W1 1705 aaKnown RBP6.09□□□□□ -1.43
PHTF2-202ENST00000275575 SHANK3Q9BYB0 1731 aa6.09□□□□□ -1.43
PHTF2-202ENST00000275575 KIAA1210Q9ULL0 1709 aa6.09□□□□□ -1.43
PHTF2-202ENST00000275575 ZNF644Q9H582 1327 aaPredicted RBP6.09□□□□□ -1.44
PHTF2-202ENST00000275575 COL18A1P39060 1754 aa6.09□□□□□ -1.44
PHTF2-202ENST00000275575 SCAF11Q99590 1463 aaKnown RBP6.08□□□□□ -1.44
PHTF2-202ENST00000275575 RRBP1Q9P2E9 1410 aaKnown RBP6.08□□□□□ -1.44
PHTF2-202ENST00000275575 RREB1Q92766 1687 aa6.08□□□□□ -1.44
PHTF2-202ENST00000275575 GOLGB1Q14789 3259 aaKnown RBP6.08□□□□□ -1.44
PHTF2-202ENST00000275575 PTPRUQ92729 1446 aa6.08□□□□□ -1.44
PHTF2-202ENST00000275575 AFAP1Q8N556 730 aa6.08□□□□□ -1.44
PHTF2-202ENST00000275575 SBF2Q86WG5 1849 aa6.07□□□□□ -1.44
PHTF2-202ENST00000275575 ADGRB1O14514 1584 aa6.07□□□□□ -1.44
PHTF2-202ENST00000275575 RGPD3A6NKT7 1758 aaPredicted RBP6.07□□□□□ -1.44
PHTF2-202ENST00000275575 RGPD4Q7Z3J3 1758 aa6.07□□□□□ -1.44
PHTF2-202ENST00000275575 PHLPP1O60346 1717 aa6.07□□□□□ -1.44
PHTF2-202ENST00000275575 LRP6O75581 1613 aa6.06□□□□□ -1.44
PHTF2-202ENST00000275575 PLCH1Q4KWH8 1693 aa6.06□□□□□ -1.44
PHTF2-202ENST00000275575 FGD6Q6ZV73 1430 aa6.06□□□□□ -1.44
PHTF2-202ENST00000275575 PHRF1Q9P1Y6 1649 aaKnown RBP6.05□□□□□ -1.44
PHTF2-202ENST00000275575 LMO7Q8WWI1 1683 aa6.05□□□□□ -1.44
PHTF2-202ENST00000275575 THSD7AQ9UPZ6 1657 aa6.05□□□□□ -1.44
PHTF2-202ENST00000275575 NKTRP30414 1462 aaKnown RBP6.05□□□□□ -1.44
PHTF2-202ENST00000275575 NWD2Q9ULI1 1742 aa6.05□□□□□ -1.44
PHTF2-202ENST00000275575 MST1RQ04912 1400 aa6.05□□□□□ -1.44
PHTF2-202ENST00000275575 AKAP12Q02952 1782 aa6.04□□□□□ -1.44
PHTF2-202ENST00000275575 KANK4Q5T7N3 995 aaPredicted RBP6.04□□□□□ -1.44
PHTF2-202ENST00000275575 FBXO41Q8TF61 875 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms