RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 C11orf95C9JLR9 678 aaPredicted RBP11.27□□□□□ -0.61
CTDSPL-201ENST00000273179 TMTC2Q8N394 836 aa11.27□□□□□ -0.61
CTDSPL-201ENST00000273179 TTC36A6NLP5 189 aa11.26□□□□□ -0.61
CTDSPL-201ENST00000273179 MYH16Q9H6N6 1097 aa11.26□□□□□ -0.61
CTDSPL-201ENST00000273179 TERF2IPQ9NYB0 399 aa11.26□□□□□ -0.61
CTDSPL-201ENST00000273179 GOLGA3Q08378 1498 aa11.26□□□□□ -0.61
CTDSPL-201ENST00000273179 PIAS4Q8N2W9 510 aaPredicted RBP11.26□□□□□ -0.61
CTDSPL-201ENST00000273179 MIER1Q8N108 512 aa11.25□□□□□ -0.61
CTDSPL-201ENST00000273179 FAM13BQ9NYF5 915 aa11.25□□□□□ -0.61
CTDSPL-201ENST00000273179 EXOC8Q8IYI6 725 aa11.25□□□□□ -0.61
CTDSPL-201ENST00000273179 FOXD1Q16676 465 aa11.25□□□□□ -0.61
CTDSPL-201ENST00000273179 TRHP20396 242 aaPredicted RBP11.24□□□□□ -0.61
CTDSPL-201ENST00000273179 SMAP1Q8IYB5 467 aaPredicted RBP11.24□□□□□ -0.61
CTDSPL-201ENST00000273179 FBXW7Q969H0 707 aa11.24□□□□□ -0.61
CTDSPL-201ENST00000273179 GZF1Q9H116 711 aaPredicted RBP11.24□□□□□ -0.61
CTDSPL-201ENST00000273179 TNNT1P13805 278 aa11.24□□□□□ -0.61
CTDSPL-201ENST00000273179 FOSBP53539 338 aa11.24□□□□□ -0.61
CTDSPL-201ENST00000273179 CGNQ9P2M7 1197 aaKnown RBP11.24□□□□□ -0.61
CTDSPL-201ENST00000273179 NAP1L1P55209 391 aaKnown RBP11.23□□□□□ -0.61
CTDSPL-201ENST00000273179 NRDCO43847 1150 aa11.23□□□□□ -0.61
CTDSPL-201ENST00000273179 ZNF771Q7L3S4 317 aaPredicted RBP11.23□□□□□ -0.61
CTDSPL-201ENST00000273179 L1TD1Q5T7N2 865 aaKnown RBP11.23□□□□□ -0.61
CTDSPL-201ENST00000273179 RBM28Q9NW13 759 aaKnown RBP11.23□□□□□ -0.61
CTDSPL-201ENST00000273179 MTERF4Q7Z6M4 381 aaKnown RBP11.22□□□□□ -0.61
CTDSPL-201ENST00000273179 MFAP1P55081 439 aaKnown RBP11.21□□□□□ -0.61
CTDSPL-201ENST00000273179 CC2D2AQ9P2K1 1620 aa11.21□□□□□ -0.62
CTDSPL-201ENST00000273179 DDRGK1Q96HY6 314 aa11.21□□□□□ -0.62
CTDSPL-201ENST00000273179 CUX1P39880 1505 aa11.2□□□□□ -0.62
CTDSPL-201ENST00000273179 CEP120Q8N960 986 aa11.2□□□□□ -0.62
CTDSPL-201ENST00000273179 NBPF1Q3BBV0 1214 aa11.2□□□□□ -0.62
CTDSPL-201ENST00000273179 CLIP1P30622 1438 aa11.2□□□□□ -0.62
CTDSPL-201ENST00000273179 CEP164Q9UPV0 1460 aa11.19□□□□□ -0.62
CTDSPL-201ENST00000273179 SEMA3FQ13275 785 aa11.19□□□□□ -0.62
CTDSPL-201ENST00000273179 HMGXB3Q12766 1538 aa11.19□□□□□ -0.62
CTDSPL-201ENST00000273179 PES1O00541 588 aaKnown RBP11.19□□□□□ -0.62
CTDSPL-201ENST00000273179 SMARCA5O60264 1052 aaPredicted RBP11.19□□□□□ -0.62
CTDSPL-201ENST00000273179 SPTY2D1Q68D10 685 aaPredicted RBP11.19□□□□□ -0.62
CTDSPL-201ENST00000273179 NESP48681 1621 aa11.18□□□□□ -0.62
CTDSPL-201ENST00000273179 TDO2P48775 406 aa11.18□□□□□ -0.62
CTDSPL-201ENST00000273179 ZNF500O60304 480 aaPredicted RBP11.17□□□□□ -0.62
CTDSPL-201ENST00000273179 RINLQ6ZS11 566 aa11.17□□□□□ -0.62
CTDSPL-201ENST00000273179 CFTRP13569 1480 aa11.17□□□□□ -0.62
CTDSPL-201ENST00000273179 HDAC1Q13547 482 aaPredicted RBP11.17□□□□□ -0.62
CTDSPL-201ENST00000273179 WDR78Q5VTH9 848 aa11.17□□□□□ -0.62
CTDSPL-201ENST00000273179 NBPF11Q86T75 865 aa11.17□□□□□ -0.62
CTDSPL-201ENST00000273179 RGL3Q3MIN7 710 aa11.17□□□□□ -0.62
CTDSPL-201ENST00000273179 TOP2BQ02880 1626 aa11.16□□□□□ -0.62
CTDSPL-201ENST00000273179 VGFO15240 615 aaPredicted RBP11.16□□□□□ -0.62
CTDSPL-201ENST00000273179 HMGN5P82970 282 aaKnown RBP11.16□□□□□ -0.62
CTDSPL-201ENST00000273179 PRDM4Q9UKN5 801 aa11.16□□□□□ -0.62
CTDSPL-201ENST00000273179 DHX16O60231 1041 aaKnown RBP11.16□□□□□ -0.62
CTDSPL-201ENST00000273179 CCDC181Q5TID7 509 aa11.16□□□□□ -0.62
CTDSPL-201ENST00000273179 SUDS3Q9H7L9 328 aaPredicted RBP11.16□□□□□ -0.62
CTDSPL-201ENST00000273179 NBPF20Q3BBV1 942 aa11.16□□□□□ -0.62
CTDSPL-201ENST00000273179 TMEM51Q9NW97 253 aa11.15□□□□□ -0.62
CTDSPL-201ENST00000273179 CADPSQ9ULU8 1353 aa11.15□□□□□ -0.62
CTDSPL-201ENST00000273179 CCDC66A2RUB6 948 aa11.15□□□□□ -0.63
CTDSPL-201ENST00000273179 GOLGA6L6A8MZA4 724 aa11.15□□□□□ -0.63
CTDSPL-201ENST00000273179 RBM27Q9P2N5 1060 aaKnown RBP11.14□□□□□ -0.63
CTDSPL-201ENST00000273179 CCER2I3L3R5 266 aa11.14□□□□□ -0.63
CTDSPL-201ENST00000273179 KIF20AO95235 890 aa11.14□□□□□ -0.63
CTDSPL-201ENST00000273179 ZRSR2Q15696 482 aaKnown RBP11.14□□□□□ -0.63
CTDSPL-201ENST00000273179 ERICH4A6NGS2 130 aa11.13□□□□□ -0.63
CTDSPL-201ENST00000273179 MEX3CQ5U5Q3 659 aaKnown RBP11.13□□□□□ -0.63
CTDSPL-201ENST00000273179 NBPF6Q5VWK0 638 aa11.13□□□□□ -0.63
CTDSPL-201ENST00000273179 NBPF5PQ86XG9 351 aaPredicted RBP11.13□□□□□ -0.63
CTDSPL-201ENST00000273179 NBPF4Q96M43 638 aa11.13□□□□□ -0.63
CTDSPL-201ENST00000273179 PEX14O75381 377 aa11.13□□□□□ -0.63
CTDSPL-201ENST00000273179 IPO9Q96P70 1041 aaKnown RBP11.13□□□□□ -0.63
CTDSPL-201ENST00000273179 TSPYL1Q9H0U9 437 aa11.13□□□□□ -0.63
CTDSPL-201ENST00000273179 GOLGA6L3A6NEY3 463 aa11.13□□□□□ -0.63
CTDSPL-201ENST00000273179 MAP2K1Q02750 393 aaPredicted RBP11.13□□□□□ -0.63
CTDSPL-201ENST00000273179 STK11IPQ8N1F8 1099 aa11.13□□□□□ -0.63
CTDSPL-201ENST00000273179 ZBTB22O15209 634 aa11.12□□□□□ -0.63
CTDSPL-201ENST00000273179 LETM1O95202 739 aaPredicted RBP11.12□□□□□ -0.63
CTDSPL-201ENST00000273179 KCNJ4P48050 445 aa11.12□□□□□ -0.63
CTDSPL-201ENST00000273179 ISY1Q9ULR0 285 aaKnown RBP11.12□□□□□ -0.63
CTDSPL-201ENST00000273179 HMGB1P1B2RPK0 211 aaPredicted RBP11.11□□□□□ -0.63
CTDSPL-201ENST00000273179 BRD1O95696 1058 aa11.11□□□□□ -0.63
CTDSPL-201ENST00000273179 KANK4Q5T7N3 995 aaPredicted RBP11.11□□□□□ -0.63
CTDSPL-201ENST00000273179 GOLGA6L1Q8N7Z2 621 aa11.11□□□□□ -0.63
CTDSPL-201ENST00000273179 CUX2O14529 1486 aa11.11□□□□□ -0.63
CTDSPL-201ENST00000273179 LOC102724159A0A0B4J2E5 919 aa11.11□□□□□ -0.63
CTDSPL-201ENST00000273179 PWP2Q15269 919 aaKnown RBP11.11□□□□□ -0.63
CTDSPL-201ENST00000273179 NEFHP12036 1026 aa11.1□□□□□ -0.63
CTDSPL-201ENST00000273179 CENPJQ9HC77 1338 aaPredicted RBP11.1□□□□□ -0.63
CTDSPL-201ENST00000273179 NBPF9Q3BBW0 867 aa11.1□□□□□ -0.63
CTDSPL-201ENST00000273179 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.1□□□□□ -0.632e-7■■■■■ 33.6
CTDSPL-201ENST00000273179 SH3BP1Q9Y3L3 701 aa11.1□□□□□ -0.63
CTDSPL-201ENST00000273179 CHMP4CQ96CF2 233 aa11.09□□□□□ -0.63
CTDSPL-201ENST00000273179 SH3BP5O60239 455 aa11.09□□□□□ -0.63
CTDSPL-201ENST00000273179 KIF27Q86VH2 1401 aa11.09□□□□□ -0.63
CTDSPL-201ENST00000273179 NGEFQ8N5V2 710 aa11.09□□□□□ -0.63
CTDSPL-201ENST00000273179 SPINK5Q9NQ38 1064 aaPredicted RBP11.09□□□□□ -0.63
CTDSPL-201ENST00000273179 KIF4AO95239 1232 aa11.09□□□□□ -0.63
CTDSPL-201ENST00000273179 APBB1IPQ7Z5R6 666 aaPredicted RBP11.09□□□□□ -0.63
CTDSPL-201ENST00000273179 EGFL6Q8IUX8 553 aa11.09□□□□□ -0.63
CTDSPL-201ENST00000273179 GTF2A1P52655 376 aaPredicted RBP11.08□□□□□ -0.64
CTDSPL-201ENST00000273179 RAD54L2Q9Y4B4 1467 aa11.08□□□□□ -0.64
CTDSPL-201ENST00000273179 KIF21BO75037 1637 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms