RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 ADGBQ8N7X0 1667 aa20.86■□□□□ 0.93
CTDSP1-201ENST00000273062 HNRNPMP52272 730 aaKnown RBP eCLIP20.86■□□□□ 0.93
CTDSP1-201ENST00000273062 SKAP1Q86WV1 359 aa20.86■□□□□ 0.93
CTDSP1-201ENST00000273062 PZPP20742 1482 aa20.86■□□□□ 0.93
CTDSP1-201ENST00000273062 HSP90AA2PQ14568 343 aaPredicted RBP20.86■□□□□ 0.93
CTDSP1-201ENST00000273062 FRAT2O75474 233 aaPredicted RBP20.85■□□□□ 0.93
CTDSP1-201ENST00000273062 ADGRL2O95490 1459 aa20.84■□□□□ 0.93
CTDSP1-201ENST00000273062 NUDCQ9Y266 331 aa20.84■□□□□ 0.93
CTDSP1-201ENST00000273062 TCERG1O14776 1098 aaKnown RBP20.83■□□□□ 0.93
CTDSP1-201ENST00000273062 A0A0U1RQG5 324 aaPredicted RBP20.83■□□□□ 0.92
CTDSP1-201ENST00000273062 ANKRD30AQ9BXX3 1397 aa20.82■□□□□ 0.92
CTDSP1-201ENST00000273062 C9orf84Q5VXU9 1444 aa20.82■□□□□ 0.92
CTDSP1-201ENST00000273062 HSPA5P11021 654 aaKnown RBP20.81■□□□□ 0.92
CTDSP1-201ENST00000273062 RPRD2Q5VT52 1461 aaKnown RBP20.8■□□□□ 0.92
CTDSP1-201ENST00000273062 ANKRD50Q9ULJ7 1429 aa20.8■□□□□ 0.92
CTDSP1-201ENST00000273062 NAP1L5Q96NT1 182 aaPredicted RBP20.79■□□□□ 0.92
CTDSP1-201ENST00000273062 DAXXQ9UER7 740 aaPredicted RBP20.79■□□□□ 0.92
CTDSP1-201ENST00000273062 NBPF8Q3BBV2 869 aa20.78■□□□□ 0.92
CTDSP1-201ENST00000273062 TEX14Q8IWB6 1497 aa20.78■□□□□ 0.92
CTDSP1-201ENST00000273062 CNTLNQ9NXG0 1405 aa20.78■□□□□ 0.92
CTDSP1-201ENST00000273062 EXOC6Q8TAG9 804 aa20.77■□□□□ 0.92
CTDSP1-201ENST00000273062 TTC37Q6PGP7 1564 aa20.77■□□□□ 0.92
CTDSP1-201ENST00000273062 SAMD9LQ8IVG5 1584 aa20.77■□□□□ 0.92
CTDSP1-201ENST00000273062 CDC42BPBQ9Y5S2 1711 aa20.76■□□□□ 0.91
CTDSP1-201ENST00000273062 PKD2Q13563 968 aa20.76■□□□□ 0.91
CTDSP1-201ENST00000273062 MBD5Q9P267 1494 aa20.76■□□□□ 0.91
CTDSP1-201ENST00000273062 RRP9O43818 475 aaKnown RBP20.75■□□□□ 0.91
CTDSP1-201ENST00000273062 TSPY4P0CV99 314 aa20.74■□□□□ 0.91
CTDSP1-201ENST00000273062 TSPY10P0CW01 314 aa20.74■□□□□ 0.91
CTDSP1-201ENST00000273062 ABCC2Q92887 1545 aa20.74■□□□□ 0.91
CTDSP1-201ENST00000273062 SHANK2Q9UPX8 1470 aa20.74■□□□□ 0.91
CTDSP1-201ENST00000273062 PREX2Q70Z35 1606 aa20.74■□□□□ 0.91
CTDSP1-201ENST00000273062 CNGB1Q14028 1251 aaPredicted RBP20.73■□□□□ 0.91
CTDSP1-201ENST00000273062 CLASP1Q7Z460 1538 aa20.73■□□□□ 0.91
CTDSP1-201ENST00000273062 DDRGK1Q96HY6 314 aa20.73■□□□□ 0.91
CTDSP1-201ENST00000273062 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.72■□□□□ 0.913e-9■■■■■ 48.7
CTDSP1-201ENST00000273062 NUP155O75694 1391 aa20.72■□□□□ 0.91
CTDSP1-201ENST00000273062 KIF15Q9NS87 1388 aa20.72■□□□□ 0.91
CTDSP1-201ENST00000273062 HSP90AA1P07900 732 aaKnown RBP20.72■□□□□ 0.91
CTDSP1-201ENST00000273062 KIAA1107Q9UPP5 1409 aa20.71■□□□□ 0.91
CTDSP1-201ENST00000273062 RBM10P98175 930 aaKnown RBP20.71■□□□□ 0.91
CTDSP1-201ENST00000273062 POGKQ9P215 609 aa20.7■□□□□ 0.9
CTDSP1-201ENST00000273062 ARHGAP5Q13017 1502 aa20.69■□□□□ 0.9
CTDSP1-201ENST00000273062 SYCP2Q9BX26 1530 aa20.69■□□□□ 0.9
CTDSP1-201ENST00000273062 EIF4G2P78344 907 aaKnown RBP eCLIP20.69■□□□□ 0.9
CTDSP1-201ENST00000273062 MS4A1P11836 297 aa20.69■□□□□ 0.9
CTDSP1-201ENST00000273062 ARHGEF5Q12774 1597 aa20.68■□□□□ 0.9
CTDSP1-201ENST00000273062 CCDC141Q6ZP82 1450 aa20.68■□□□□ 0.9
CTDSP1-201ENST00000273062 ZNF326Q5BKZ1 582 aaKnown RBP20.66■□□□□ 0.9
CTDSP1-201ENST00000273062 ARXQ96QS3 562 aa20.64■□□□□ 0.89
CTDSP1-201ENST00000273062 PNNQ9H307 717 aaKnown RBP20.64■□□□□ 0.89
CTDSP1-201ENST00000273062 ZCCHC11Q5TAX3 1644 aaKnown RBP20.64■□□□□ 0.89
CTDSP1-201ENST00000273062 ARID4BQ4LE39 1312 aaPredicted RBP20.64■□□□□ 0.89
CTDSP1-201ENST00000273062 RRP1P56182 461 aaKnown RBP20.62■□□□□ 0.89
CTDSP1-201ENST00000273062 AAMPQ13685 434 aa20.62■□□□□ 0.89
CTDSP1-201ENST00000273062 ARHGEF12Q9NZN5 1544 aa20.61■□□□□ 0.89
CTDSP1-201ENST00000273062 CCDC7Q96M83 1385 aa20.6■□□□□ 0.89
CTDSP1-201ENST00000273062 MYO5CQ9NQX4 1742 aa20.59■□□□□ 0.89
CTDSP1-201ENST00000273062 KDM5DQ9BY66 1539 aa20.57■□□□□ 0.88
CTDSP1-201ENST00000273062 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.56■□□□□ 0.884e-17■□□□□ 10.2
CTDSP1-201ENST00000273062 SPATA31E1Q6ZUB1 1445 aa20.56■□□□□ 0.88
CTDSP1-201ENST00000273062 UHRF1BP1LA0JNW5 1464 aa20.55■□□□□ 0.88
CTDSP1-201ENST00000273062 CLCN1P35523 988 aa20.54■□□□□ 0.88
CTDSP1-201ENST00000273062 FAM135AQ9P2D6 1515 aa20.54■□□□□ 0.88
CTDSP1-201ENST00000273062 FGD1P98174 961 aa20.54■□□□□ 0.88
CTDSP1-201ENST00000273062 RSPH4AQ5TD94 716 aa20.54■□□□□ 0.88
CTDSP1-201ENST00000273062 PRDM4Q9UKN5 801 aa20.53■□□□□ 0.88
CTDSP1-201ENST00000273062 PLCH2O75038 1416 aa20.53■□□□□ 0.88
CTDSP1-201ENST00000273062 KDM2AQ9Y2K7 1162 aa20.52■□□□□ 0.88
CTDSP1-201ENST00000273062 PANK2Q9BZ23 570 aa20.51■□□□□ 0.87
CTDSP1-201ENST00000273062 PLEKHH2Q8IVE3 1493 aa20.51■□□□□ 0.87
CTDSP1-201ENST00000273062 KIF7Q2M1P5 1343 aa20.51■□□□□ 0.87
CTDSP1-201ENST00000273062 RGS3P49796 1198 aa20.5■□□□□ 0.87
CTDSP1-201ENST00000273062 MAST1Q9Y2H9 1570 aa20.5■□□□□ 0.87
CTDSP1-201ENST00000273062 TRAPPC8Q9Y2L5 1435 aa20.49■□□□□ 0.87
CTDSP1-201ENST00000273062 XRCC6P12956 609 aaKnown RBP eCLIP20.48■□□□□ 0.878e-6■□□□□ 10.2
CTDSP1-201ENST00000273062 EFCAB2Q5VUJ9 269 aa20.48■□□□□ 0.87
CTDSP1-201ENST00000273062 USP47Q96K76 1375 aa20.47■□□□□ 0.87
CTDSP1-201ENST00000273062 PLIN1O60240 522 aa20.47■□□□□ 0.87
CTDSP1-201ENST00000273062 RCAN3Q9UKA8 241 aa20.46■□□□□ 0.87
CTDSP1-201ENST00000273062 ABCC1P33527 1531 aa20.45■□□□□ 0.86
CTDSP1-201ENST00000273062 AFAP1Q8N556 730 aa20.45■□□□□ 0.86
CTDSP1-201ENST00000273062 PLXNC1O60486 1568 aa20.45■□□□□ 0.86
CTDSP1-201ENST00000273062 POLR3GLQ9BT43 218 aa20.44■□□□□ 0.86
CTDSP1-201ENST00000273062 L1TD1Q5T7N2 865 aaKnown RBP20.44■□□□□ 0.86
CTDSP1-201ENST00000273062 UNC13BO14795 1591 aa20.44■□□□□ 0.86
CTDSP1-201ENST00000273062 C8orf34Q49A92 452 aa20.43■□□□□ 0.86
CTDSP1-201ENST00000273062 BCORL1Q5H9F3 1711 aa20.43■□□□□ 0.86
CTDSP1-201ENST00000273062 PLA2R1Q13018 1463 aa20.43■□□□□ 0.86
CTDSP1-201ENST00000273062 RGL3Q3MIN7 710 aa20.42■□□□□ 0.86
CTDSP1-201ENST00000273062 UHRF1BP1Q6BDS2 1440 aa20.41■□□□□ 0.86
CTDSP1-201ENST00000273062 PNISRQ8TF01 805 aaKnown RBP20.41■□□□□ 0.86
CTDSP1-201ENST00000273062 KDM5CP41229 1560 aa20.41■□□□□ 0.86
CTDSP1-201ENST00000273062 WDR7Q9Y4E6 1490 aa20.4■□□□□ 0.86
CTDSP1-201ENST00000273062 CARD11Q9BXL7 1154 aa20.4■□□□□ 0.86
CTDSP1-201ENST00000273062 DUOX2Q9NRD8 1548 aa20.4■□□□□ 0.86
CTDSP1-201ENST00000273062 ERBB4Q15303 1308 aa20.4■□□□□ 0.86
CTDSP1-201ENST00000273062 CCDC144AA2RUR9 1427 aa20.4■□□□□ 0.86
CTDSP1-201ENST00000273062 RALGAPBQ86X10 1494 aa20.39■□□□□ 0.86
CTDSP1-201ENST00000273062 DHX29Q7Z478 1369 aaKnown RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms