RNA–Protein interactions for RNA: ENST00000273027.6

CPNE9-201, Transcript of copine family member 9, humanhuman

TSL 3

Gene CPNE9, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-201ENST00000273027 NCOA1Q15788 1441 aa14.2□□□□□ -0.14
CPNE9-201ENST00000273027 ARHGAP5Q13017 1502 aa14.2□□□□□ -0.14
CPNE9-201ENST00000273027 ITSN2Q9NZM3 1697 aa14.2□□□□□ -0.14
CPNE9-201ENST00000273027 REREQ9P2R6 1566 aa14.19□□□□□ -0.14
CPNE9-201ENST00000273027 DNMT1P26358 1616 aaKnown RBP14.19□□□□□ -0.14
CPNE9-201ENST00000273027 ANP32CO43423 234 aa14.18□□□□□ -0.14
CPNE9-201ENST00000273027 DIP2CQ9Y2E4 1556 aa14.17□□□□□ -0.14
CPNE9-201ENST00000273027 CDC42BPAQ5VT25 1732 aa14.16□□□□□ -0.14
CPNE9-201ENST00000273027 CAMSAP1Q5T5Y3 1602 aa14.15□□□□□ -0.14
CPNE9-201ENST00000273027 MLH3Q9UHC1 1453 aa14.14□□□□□ -0.15
CPNE9-201ENST00000273027 PIP4K2BP78356 416 aa14.14□□□□□ -0.15
CPNE9-201ENST00000273027 ABCA6Q8N139 1617 aa14.14□□□□□ -0.15
CPNE9-201ENST00000273027 ABCC1P33527 1531 aa14.14□□□□□ -0.15
CPNE9-201ENST00000273027 CNTLNQ9NXG0 1405 aa14.14□□□□□ -0.15
CPNE9-201ENST00000273027 ZMYM3Q14202 1370 aa14.13□□□□□ -0.15
CPNE9-201ENST00000273027 HSPA1LP34931 641 aa14.13□□□□□ -0.15
CPNE9-201ENST00000273027 PKD2Q13563 968 aa14.13□□□□□ -0.15
CPNE9-201ENST00000273027 AGLP35573 1532 aa14.13□□□□□ -0.15
CPNE9-201ENST00000273027 ADGBQ8N7X0 1667 aa14.13□□□□□ -0.15
CPNE9-201ENST00000273027 DDX10Q13206 875 aaKnown RBP14.12□□□□□ -0.15
CPNE9-201ENST00000273027 POLR1AO95602 1720 aaPredicted RBP14.11□□□□□ -0.15
CPNE9-201ENST00000273027 DAPK1P53355 1430 aa14.11□□□□□ -0.15
CPNE9-201ENST00000273027 NPATQ14207 1427 aa14.1□□□□□ -0.15
CPNE9-201ENST00000273027 KIDINS220Q9ULH0 1771 aa14.1□□□□□ -0.15
CPNE9-201ENST00000273027 ZNF777Q9ULD5 760 aaPredicted RBP14.1□□□□□ -0.15
CPNE9-201ENST00000273027 PPP6R1Q9UPN7 881 aa14.09□□□□□ -0.15
CPNE9-201ENST00000273027 SUPT16HQ9Y5B9 1047 aaKnown RBP14.09□□□□□ -0.15
CPNE9-201ENST00000273027 TOM1O60784 492 aa14.08□□□□□ -0.16
CPNE9-201ENST00000273027 ADGRL2O95490 1459 aa14.07□□□□□ -0.16
CPNE9-201ENST00000273027 PHF23Q9BUL5 403 aaPredicted RBP14.07□□□□□ -0.16
CPNE9-201ENST00000273027 RPRD2Q5VT52 1461 aaKnown RBP14.06□□□□□ -0.16
CPNE9-201ENST00000273027 GGT6Q6P531 493 aa14.06□□□□□ -0.16
CPNE9-201ENST00000273027 MROH2AA6NES4 1674 aa14.06□□□□□ -0.16
CPNE9-201ENST00000273027 CROCC2H7BZ55 1655 aa14.06□□□□□ -0.16
CPNE9-201ENST00000273027 SPAG9O60271 1321 aaKnown RBP14.06□□□□□ -0.16
CPNE9-201ENST00000273027 HNRNPMP52272 730 aaKnown RBP eCLIP14.05□□□□□ -0.16
CPNE9-201ENST00000273027 EIF4G2P78344 907 aaKnown RBP eCLIP14.05□□□□□ -0.16
CPNE9-201ENST00000273027 MPHOSPH9Q99550 1183 aa14.05□□□□□ -0.16
CPNE9-201ENST00000273027 SAMD9LQ8IVG5 1584 aa14.05□□□□□ -0.16
CPNE9-201ENST00000273027 ABCC5O15440 1437 aa14.04□□□□□ -0.16
CPNE9-201ENST00000273027 MED1Q15648 1581 aaPredicted RBP14.04□□□□□ -0.16
CPNE9-201ENST00000273027 TRIM52Q96A61 297 aa14.03□□□□□ -0.16
CPNE9-201ENST00000273027 SENP3Q9H4L4 574 aaPredicted RBP14.03□□□□□ -0.16
CPNE9-201ENST00000273027 PLA2R1Q13018 1463 aa14.02□□□□□ -0.16
CPNE9-201ENST00000273027 ANKRD30BQ9BXX2 1392 aa14.02□□□□□ -0.17
CPNE9-201ENST00000273027 NEFLP07196 543 aa14.02□□□□□ -0.17
CPNE9-201ENST00000273027 RRP7BPQ9NSQ0 103 aa14.02□□□□□ -0.17
CPNE9-201ENST00000273027 SHANK2Q9UPX8 1470 aa14.01□□□□□ -0.17
CPNE9-201ENST00000273027 INO80Q9ULG1 1556 aaPredicted RBP14□□□□□ -0.17
CPNE9-201ENST00000273027 SYCP2Q9BX26 1530 aa14□□□□□ -0.17
CPNE9-201ENST00000273027 GPATCH8Q9UKJ3 1502 aaKnown RBP14□□□□□ -0.17
CPNE9-201ENST00000273027 CLTCQ00610 1675 aaKnown RBP13.99□□□□□ -0.17
CPNE9-201ENST00000273027 ERICH6BQ5W0A0 696 aa13.99□□□□□ -0.17
CPNE9-201ENST00000273027 CEP170BQ9Y4F5 1589 aaPredicted RBP13.99□□□□□ -0.17
CPNE9-201ENST00000273027 CAMSAP2Q08AD1 1489 aa13.99□□□□□ -0.17
CPNE9-201ENST00000273027 PLEKHH2Q8IVE3 1493 aa13.99□□□□□ -0.17
CPNE9-201ENST00000273027 PLXNC1O60486 1568 aa13.98□□□□□ -0.17
CPNE9-201ENST00000273027 ATP7AQ04656 1500 aa13.98□□□□□ -0.17
CPNE9-201ENST00000273027 KIAA1107Q9UPP5 1409 aa13.98□□□□□ -0.17
CPNE9-201ENST00000273027 MYO3AQ8NEV4 1616 aa13.97□□□□□ -0.17
CPNE9-201ENST00000273027 ANKRD30AQ9BXX3 1397 aa13.97□□□□□ -0.17
CPNE9-201ENST00000273027 CHIC2Q9UKJ5 165 aa13.96□□□□□ -0.17
CPNE9-201ENST00000273027 ZNF142P52746 1687 aaPredicted RBP13.95□□□□□ -0.18
CPNE9-201ENST00000273027 A2MP01023 1474 aa13.95□□□□□ -0.18
CPNE9-201ENST00000273027 FBXO31Q5XUX0 539 aaPredicted RBP13.95□□□□□ -0.18
CPNE9-201ENST00000273027 ANKLE2Q86XL3 938 aa13.95□□□□□ -0.18
CPNE9-201ENST00000273027 CFDP1Q9UEE9 299 aaPredicted RBP13.95□□□□□ -0.18
CPNE9-201ENST00000273027 KDM5DQ9BY66 1539 aa13.95□□□□□ -0.18
CPNE9-201ENST00000273027 A2ML1A8K2U0 1454 aa13.94□□□□□ -0.18
CPNE9-201ENST00000273027 HSPA5P11021 654 aaKnown RBP13.94□□□□□ -0.18
CPNE9-201ENST00000273027 ARHGEF5Q12774 1597 aa13.94□□□□□ -0.18
CPNE9-201ENST00000273027 RSPH4AQ5TD94 716 aa13.94□□□□□ -0.18
CPNE9-201ENST00000273027 L3MBTL2Q969R5 705 aa13.93□□□□□ -0.18
CPNE9-201ENST00000273027 CPS1P31327 1500 aa13.93□□□□□ -0.18
CPNE9-201ENST00000273027 SLC4A1APQ9BWU0 796 aaKnown RBP13.92□□□□□ -0.18
CPNE9-201ENST00000273027 PZPP20742 1482 aa13.92□□□□□ -0.18
CPNE9-201ENST00000273027 THEMISQ8N1K5 641 aaPredicted RBP13.91□□□□□ -0.18
CPNE9-201ENST00000273027 WASHC2AQ641Q2 1341 aa13.9□□□□□ -0.18
CPNE9-201ENST00000273027 SPATA31E1Q6ZUB1 1445 aa13.9□□□□□ -0.18
CPNE9-201ENST00000273027 TNRQ92752 1358 aa13.9□□□□□ -0.18
CPNE9-201ENST00000273027 CCDC7Q96M83 1385 aa13.9□□□□□ -0.18
CPNE9-201ENST00000273027 MBD5Q9P267 1494 aa13.89□□□□□ -0.19
CPNE9-201ENST00000273027 ROCK2O75116 1388 aaKnown RBP13.88□□□□□ -0.19
CPNE9-201ENST00000273027 KIF3BO15066 747 aa13.88□□□□□ -0.19
CPNE9-201ENST00000273027 ZNF644Q9H582 1327 aaPredicted RBP13.88□□□□□ -0.19
CPNE9-201ENST00000273027 RGS17Q9UGC6 210 aaPredicted RBP13.87□□□□□ -0.19
CPNE9-201ENST00000273027 RTEL1-TNFRSF6BF6WH68 1400 aa13.87□□□□□ -0.19
CPNE9-201ENST00000273027 ANKRD50Q9ULJ7 1429 aa13.87□□□□□ -0.19
CPNE9-201ENST00000273027 NEURL4Q96JN8 1562 aa13.86□□□□□ -0.19
CPNE9-201ENST00000273027 WASHC2CQ9Y4E1 1318 aa13.86□□□□□ -0.19
CPNE9-201ENST00000273027 FAM135AQ9P2D6 1515 aa13.85□□□□□ -0.19
CPNE9-201ENST00000273027 MAST1Q9Y2H9 1570 aa13.85□□□□□ -0.19
CPNE9-201ENST00000273027 NPHP4O75161 1426 aaPredicted RBP13.85□□□□□ -0.19
CPNE9-201ENST00000273027 FKBP8Q14318 412 aa13.85□□□□□ -0.19
CPNE9-201ENST00000273027 HIRIP3Q9BW71 556 aaPredicted RBP13.85□□□□□ -0.19
CPNE9-201ENST00000273027 VWDEQ8N2E2 1590 aa13.84□□□□□ -0.19
CPNE9-201ENST00000273027 ALKQ9UM73 1620 aa13.84□□□□□ -0.19
CPNE9-201ENST00000273027 TSPY4P0CV99 314 aa13.84□□□□□ -0.19
CPNE9-201ENST00000273027 TSPY10P0CW01 314 aa13.84□□□□□ -0.19
CPNE9-201ENST00000273027 DHX29Q7Z478 1369 aaKnown RBP13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms