RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 MROH1Q8NDA8 1641 aa17.47■□□□□ 0.39
SDE2-201ENST00000272091 HECW2Q9P2P5 1572 aa17.46■□□□□ 0.39
SDE2-201ENST00000272091 FRMPD1Q5SYB0 1578 aa17.45■□□□□ 0.38
SDE2-201ENST00000272091 L3MBTL2Q969R5 705 aa17.45■□□□□ 0.38
SDE2-201ENST00000272091 ABCA6Q8N139 1617 aa17.45■□□□□ 0.38
SDE2-201ENST00000272091 VWDEQ8N2E2 1590 aa17.45■□□□□ 0.38
SDE2-201ENST00000272091 KIF13AQ9H1H9 1805 aa17.44■□□□□ 0.38
SDE2-201ENST00000272091 PLA2R1Q13018 1463 aa17.44■□□□□ 0.38
SDE2-201ENST00000272091 MLH3Q9UHC1 1453 aa17.44■□□□□ 0.38
SDE2-201ENST00000272091 E9PCH4 1651 aa17.43■□□□□ 0.38
SDE2-201ENST00000272091 DHX29Q7Z478 1369 aaKnown RBP17.42■□□□□ 0.38
SDE2-201ENST00000272091 TSPOAP1O95153 1857 aa17.42■□□□□ 0.38
SDE2-201ENST00000272091 PRDM15P57071 1507 aaPredicted RBP17.42■□□□□ 0.38
SDE2-201ENST00000272091 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.41■□□□□ 0.382e-6■■■■□ 20.6
SDE2-201ENST00000272091 RNF17Q9BXT8 1623 aaKnown RBP17.4■□□□□ 0.38
SDE2-201ENST00000272091 BCORL1Q5H9F3 1711 aa17.39■□□□□ 0.37
SDE2-201ENST00000272091 TET3O43151 1660 aa17.39■□□□□ 0.37
SDE2-201ENST00000272091 DIP2CQ9Y2E4 1556 aa17.38■□□□□ 0.37
SDE2-201ENST00000272091 FAM69CQ0P6D2 419 aa17.38■□□□□ 0.37
SDE2-201ENST00000272091 A2MP01023 1474 aa17.38■□□□□ 0.37
SDE2-201ENST00000272091 ATP10AO60312 1499 aa17.37■□□□□ 0.37
SDE2-201ENST00000272091 NBPF8Q3BBV2 869 aa17.37■□□□□ 0.37
SDE2-201ENST00000272091 RAPGEF3O95398 923 aa17.37■□□□□ 0.37
SDE2-201ENST00000272091 CEP152O94986 1710 aa17.34■□□□□ 0.37
SDE2-201ENST00000272091 SPHKAPQ2M3C7 1700 aa17.34■□□□□ 0.37
SDE2-201ENST00000272091 ZMYM4Q5VZL5 1548 aa17.33■□□□□ 0.37
SDE2-201ENST00000272091 MYT1LQ9UL68 1186 aa17.33■□□□□ 0.36
SDE2-201ENST00000272091 KIF3BO15066 747 aa17.32■□□□□ 0.36
SDE2-201ENST00000272091 HIRIP3Q9BW71 556 aaPredicted RBP17.32■□□□□ 0.36
SDE2-201ENST00000272091 YEATS2Q9ULM3 1422 aa17.31■□□□□ 0.36
SDE2-201ENST00000272091 TRPM2O94759 1503 aa17.31■□□□□ 0.36
SDE2-201ENST00000272091 CCDC144AA2RUR9 1427 aa17.3■□□□□ 0.36
SDE2-201ENST00000272091 LMTK2Q8IWU2 1503 aa17.3■□□□□ 0.36
SDE2-201ENST00000272091 UHRF1BP1Q6BDS2 1440 aa17.3■□□□□ 0.36
SDE2-201ENST00000272091 EFCAB6Q5THR3 1501 aa17.3■□□□□ 0.36
SDE2-201ENST00000272091 PTPRTO14522 1441 aa17.29■□□□□ 0.36
SDE2-201ENST00000272091 CLTCL1P53675 1640 aa17.29■□□□□ 0.36
SDE2-201ENST00000272091 KANK1Q14678 1352 aa17.26■□□□□ 0.35
SDE2-201ENST00000272091 MIER1Q8N108 512 aa17.25■□□□□ 0.35
SDE2-201ENST00000272091 SIGLEC1Q9BZZ2 1709 aa17.25■□□□□ 0.35
SDE2-201ENST00000272091 COL17A1Q9UMD9 1497 aaPredicted RBP17.24■□□□□ 0.35
SDE2-201ENST00000272091 SPATA31E1Q6ZUB1 1445 aa17.24■□□□□ 0.35
SDE2-201ENST00000272091 RALGAPBQ86X10 1494 aa17.23■□□□□ 0.35
SDE2-201ENST00000272091 HSPA5P11021 654 aaKnown RBP17.23■□□□□ 0.35
SDE2-201ENST00000272091 ABCC3O15438 1527 aa17.23■□□□□ 0.35
SDE2-201ENST00000272091 TRPM1Q7Z4N2 1603 aa17.23■□□□□ 0.35
SDE2-201ENST00000272091 CAMSAP1Q5T5Y3 1602 aa17.22■□□□□ 0.35
SDE2-201ENST00000272091 UGGT1Q9NYU2 1555 aa17.22■□□□□ 0.35
SDE2-201ENST00000272091 PRAG1Q86YV5 1406 aa17.2■□□□□ 0.34
SDE2-201ENST00000272091 REREQ9P2R6 1566 aa17.19■□□□□ 0.34
SDE2-201ENST00000272091 POLR1AO95602 1720 aaPredicted RBP17.19■□□□□ 0.34
SDE2-201ENST00000272091 DCAF11Q8TEB1 546 aa17.19■□□□□ 0.34
SDE2-201ENST00000272091 MROH2AA6NES4 1674 aa17.19■□□□□ 0.34
SDE2-201ENST00000272091 ZC3H13Q5T200 1668 aaKnown RBP17.19■□□□□ 0.34
SDE2-201ENST00000272091 EIF4G2P78344 907 aaKnown RBP eCLIP17.18■□□□□ 0.34
SDE2-201ENST00000272091 NPATQ14207 1427 aa17.18■□□□□ 0.34
SDE2-201ENST00000272091 NEURL4Q96JN8 1562 aa17.18■□□□□ 0.34
SDE2-201ENST00000272091 ZNF326Q5BKZ1 582 aaKnown RBP17.17■□□□□ 0.34
SDE2-201ENST00000272091 KDM2AQ9Y2K7 1162 aa17.17■□□□□ 0.34
SDE2-201ENST00000272091 GGT6Q6P531 493 aa17.16■□□□□ 0.34
SDE2-201ENST00000272091 RGL3Q3MIN7 710 aa17.16■□□□□ 0.34
SDE2-201ENST00000272091 MADDQ8WXG6 1647 aa17.15■□□□□ 0.34
SDE2-201ENST00000272091 ARHGEF40Q8TER5 1519 aa17.15■□□□□ 0.34
SDE2-201ENST00000272091 IFT172Q9UG01 1749 aa17.15■□□□□ 0.34
SDE2-201ENST00000272091 DDX10Q13206 875 aaKnown RBP17.15■□□□□ 0.34
SDE2-201ENST00000272091 KIF1BO60333 1816 aa17.15■□□□□ 0.34
SDE2-201ENST00000272091 CFAP65Q6ZU64 1925 aaKnown RBP17.14■□□□□ 0.33
SDE2-201ENST00000272091 WASHC2AQ641Q2 1341 aa17.14■□□□□ 0.33
SDE2-201ENST00000272091 C11orf95C9JLR9 678 aaPredicted RBP17.13■□□□□ 0.33
SDE2-201ENST00000272091 AGLP35573 1532 aa17.13■□□□□ 0.33
SDE2-201ENST00000272091 LAMC1P11047 1609 aa17.13■□□□□ 0.33
SDE2-201ENST00000272091 SYNMO15061 1565 aa17.12■□□□□ 0.33
SDE2-201ENST00000272091 USP47Q96K76 1375 aa17.12■□□□□ 0.33
SDE2-201ENST00000272091 PIK3C2BO00750 1634 aa17.12■□□□□ 0.33
SDE2-201ENST00000272091 ADGRB3O60242 1522 aa17.11■□□□□ 0.33
SDE2-201ENST00000272091 NOS1P29475 1434 aa17.1■□□□□ 0.33
SDE2-201ENST00000272091 WASHC2CQ9Y4E1 1318 aa17.09■□□□□ 0.33
SDE2-201ENST00000272091 ARHGAP31Q2M1Z3 1444 aa17.09■□□□□ 0.33
SDE2-201ENST00000272091 GPRASP1Q5JY77 1395 aa17.09■□□□□ 0.33
SDE2-201ENST00000272091 CNTLNQ9NXG0 1405 aa17.08■□□□□ 0.33
SDE2-201ENST00000272091 PREX1Q8TCU6 1659 aa17.08■□□□□ 0.32
SDE2-201ENST00000272091 CCDC7Q96M83 1385 aa17.07■□□□□ 0.32
SDE2-201ENST00000272091 NBPF1Q3BBV0 1214 aa17.06■□□□□ 0.32
SDE2-201ENST00000272091 ROCK2O75116 1388 aaKnown RBP17.06■□□□□ 0.32
SDE2-201ENST00000272091 CLTCQ00610 1675 aaKnown RBP17.05■□□□□ 0.32
SDE2-201ENST00000272091 PPLO60437 1756 aa17.05■□□□□ 0.32
SDE2-201ENST00000272091 CARD11Q9BXL7 1154 aa17.05■□□□□ 0.32
SDE2-201ENST00000272091 MYOM2P54296 1465 aa17.04■□□□□ 0.32
SDE2-201ENST00000272091 IQGAP1P46940 1657 aa17.04■□□□□ 0.32
SDE2-201ENST00000272091 KIF7Q2M1P5 1343 aa17.03■□□□□ 0.32
SDE2-201ENST00000272091 KIAA1210Q9ULL0 1709 aa17.03■□□□□ 0.32
SDE2-201ENST00000272091 NRXN1Q9ULB1 1477 aa17.02■□□□□ 0.32
SDE2-201ENST00000272091 MYO5BQ9ULV0 1848 aa17.01■□□□□ 0.31
SDE2-201ENST00000272091 ST20-MTHFSA0A0A6YYL1 179 aa16.98■□□□□ 0.31
SDE2-201ENST00000272091 ERVK-7P63135 1459 aa16.97■□□□□ 0.31
SDE2-201ENST00000272091 TMEM131LA2VDJ0 1609 aa16.97■□□□□ 0.31
SDE2-201ENST00000272091 ADGRF5Q8IZF2 1346 aa16.97■□□□□ 0.31
SDE2-201ENST00000272091 NEXMIFQ5QGS0 1516 aa16.96■□□□□ 0.31
SDE2-201ENST00000272091 STAC3Q96MF2 364 aa16.96■□□□□ 0.31
SDE2-201ENST00000272091 SPATA31D1Q6ZQQ2 1576 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms