RNA–Protein interactions for RNA: ENST00000269834.1

ZIM3-201, Transcript of zinc finger imprinted 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIM3, Length 2,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3-201ENST00000269834 BCL11AQ9H165 835 aa10.87□□□□□ -0.67
ZIM3-201ENST00000269834 CARMIL1Q5VZK9 1371 aa10.86□□□□□ -0.67
ZIM3-201ENST00000269834 WDR97A6NE52 1622 aa10.86□□□□□ -0.67
ZIM3-201ENST00000269834 NESP48681 1621 aa10.86□□□□□ -0.67
ZIM3-201ENST00000269834 MLLT3P42568 568 aaPredicted RBP10.86□□□□□ -0.67
ZIM3-201ENST00000269834 MCM6Q14566 821 aa10.86□□□□□ -0.67
ZIM3-201ENST00000269834 GSE1Q14687 1217 aa10.86□□□□□ -0.67
ZIM3-201ENST00000269834 DISP3Q9P2K9 1392 aa10.85□□□□□ -0.67
ZIM3-201ENST00000269834 SPATA31D1Q6ZQQ2 1576 aa10.85□□□□□ -0.67
ZIM3-201ENST00000269834 PPM1GO15355 546 aaPredicted RBP10.85□□□□□ -0.67
ZIM3-201ENST00000269834 DNMBPQ6XZF7 1577 aa10.85□□□□□ -0.67
ZIM3-201ENST00000269834 HECW2Q9P2P5 1572 aa10.85□□□□□ -0.67
ZIM3-201ENST00000269834 PROSER2Q86WR7 435 aaPredicted RBP10.85□□□□□ -0.67
ZIM3-201ENST00000269834 PHLDB1Q86UU1 1377 aa10.85□□□□□ -0.67
ZIM3-201ENST00000269834 CARNS1A5YM72 827 aa10.84□□□□□ -0.67
ZIM3-201ENST00000269834 NUBP1P53384 320 aa10.84□□□□□ -0.67
ZIM3-201ENST00000269834 ZBTB47Q9UFB7 747 aaPredicted RBP10.84□□□□□ -0.67
ZIM3-201ENST00000269834 SPINK5Q9NQ38 1064 aaPredicted RBP10.84□□□□□ -0.67
ZIM3-201ENST00000269834 WDR62O43379 1518 aa10.83□□□□□ -0.68
ZIM3-201ENST00000269834 CASKIN1Q8WXD9 1431 aa10.83□□□□□ -0.68
ZIM3-201ENST00000269834 KIF21AQ7Z4S6 1674 aa10.83□□□□□ -0.68
ZIM3-201ENST00000269834 ABCA10Q8WWZ4 1543 aa10.82□□□□□ -0.68
ZIM3-201ENST00000269834 UNCXA6NJT0 531 aa10.82□□□□□ -0.68
ZIM3-201ENST00000269834 CWC22Q9HCG8 908 aaKnown RBP10.82□□□□□ -0.68
ZIM3-201ENST00000269834 FNBP4Q8N3X1 1017 aaPredicted RBP10.81□□□□□ -0.68
ZIM3-201ENST00000269834 UBE2Q2Q8WVN8 375 aa10.81□□□□□ -0.68
ZIM3-201ENST00000269834 SERPINA10Q9UK55 444 aa10.81□□□□□ -0.68
ZIM3-201ENST00000269834 RSPH4AQ5TD94 716 aa10.79□□□□□ -0.68
ZIM3-201ENST00000269834 SAMD9Q5K651 1589 aa10.79□□□□□ -0.68
ZIM3-201ENST00000269834 PPP1R37O75864 691 aa10.78□□□□□ -0.68
ZIM3-201ENST00000269834 MYT1LQ9UL68 1186 aa10.78□□□□□ -0.68
ZIM3-201ENST00000269834 TOPBP1Q92547 1522 aa10.77□□□□□ -0.68
ZIM3-201ENST00000269834 SNAPC4Q5SXM2 1469 aa10.77□□□□□ -0.68
ZIM3-201ENST00000269834 SMYD5Q6GMV2 418 aa10.77□□□□□ -0.69
ZIM3-201ENST00000269834 PTPN23Q9H3S7 1636 aa10.77□□□□□ -0.69
ZIM3-201ENST00000269834 FMN1Q68DA7 1419 aa10.76□□□□□ -0.69
ZIM3-201ENST00000269834 LRRIQ1Q96JM4 1722 aa10.76□□□□□ -0.69
ZIM3-201ENST00000269834 CCER2I3L3R5 266 aa10.76□□□□□ -0.69
ZIM3-201ENST00000269834 PARP9Q8IXQ6 854 aa10.75□□□□□ -0.69
ZIM3-201ENST00000269834 PLSCR2Q9NRY7 297 aa10.75□□□□□ -0.69
ZIM3-201ENST00000269834 FGD6Q6ZV73 1430 aa10.75□□□□□ -0.69
ZIM3-201ENST00000269834 URB2Q14146 1524 aaKnown RBP10.75□□□□□ -0.69
ZIM3-201ENST00000269834 KDM4FA0A1W2PPD8 638 aa10.75□□□□□ -0.69
ZIM3-201ENST00000269834 PPP1R15AO75807 674 aaPredicted RBP10.75□□□□□ -0.69
ZIM3-201ENST00000269834 ITGAEP38570 1179 aa10.75□□□□□ -0.69
ZIM3-201ENST00000269834 CYB5RLQ6IPT4 315 aa10.75□□□□□ -0.69
ZIM3-201ENST00000269834 DDRGK1Q96HY6 314 aa10.74□□□□□ -0.69
ZIM3-201ENST00000269834 HFM1A2PYH4 1435 aa10.74□□□□□ -0.69
ZIM3-201ENST00000269834 SUPT6HQ7KZ85 1726 aaKnown RBP10.74□□□□□ -0.69
ZIM3-201ENST00000269834 GCC2Q8IWJ2 1684 aa10.74□□□□□ -0.69
ZIM3-201ENST00000269834 CCDC18Q5T9S5 1454 aa10.74□□□□□ -0.69
ZIM3-201ENST00000269834 MRC2Q9UBG0 1479 aa10.74□□□□□ -0.69
ZIM3-201ENST00000269834 FHOD3Q2V2M9 1422 aa10.74□□□□□ -0.69
ZIM3-201ENST00000269834 POLA1P09884 1462 aaPredicted RBP10.74□□□□□ -0.69
ZIM3-201ENST00000269834 ABCA5Q8WWZ7 1642 aa10.74□□□□□ -0.69
ZIM3-201ENST00000269834 UACAQ9BZF9 1416 aa10.73□□□□□ -0.69
ZIM3-201ENST00000269834 PYGBP11216 843 aa10.73□□□□□ -0.69
ZIM3-201ENST00000269834 EHBP1L1Q8N3D4 1523 aa10.73□□□□□ -0.69
ZIM3-201ENST00000269834 ARIH1Q9Y4X5 557 aaPredicted RBP10.72□□□□□ -0.69
ZIM3-201ENST00000269834 HECW1Q76N89 1606 aa10.72□□□□□ -0.69
ZIM3-201ENST00000269834 FAM50AQ14320 339 aaKnown RBP10.71□□□□□ -0.7
ZIM3-201ENST00000269834 GRIN2BQ13224 1484 aa10.7□□□□□ -0.7
ZIM3-201ENST00000269834 MFRPQ9BY79 579 aa10.7□□□□□ -0.7
ZIM3-201ENST00000269834 KDM5BQ9UGL1 1544 aa10.69□□□□□ -0.7
ZIM3-201ENST00000269834 C1QBPQ07021 282 aaKnown RBP10.69□□□□□ -0.7
ZIM3-201ENST00000269834 SGIP1Q9BQI5 828 aa10.69□□□□□ -0.7
ZIM3-201ENST00000269834 NCKAP5LQ9HCH0 1330 aa10.68□□□□□ -0.7
ZIM3-201ENST00000269834 CCDC27Q2M243 656 aa10.68□□□□□ -0.7
ZIM3-201ENST00000269834 KCNH8Q96L42 1107 aa10.68□□□□□ -0.7
ZIM3-201ENST00000269834 SIN3AQ96ST3 1273 aa10.68□□□□□ -0.7
ZIM3-201ENST00000269834 MYOM3Q5VTT5 1437 aa10.68□□□□□ -0.7
ZIM3-201ENST00000269834 AKNAQ7Z591 1439 aa10.68□□□□□ -0.7
ZIM3-201ENST00000269834 RAD54L2Q9Y4B4 1467 aa10.68□□□□□ -0.7
ZIM3-201ENST00000269834 UGGT2Q9NYU1 1516 aa10.68□□□□□ -0.7
ZIM3-201ENST00000269834 SMARCA5O60264 1052 aaPredicted RBP10.68□□□□□ -0.7
ZIM3-201ENST00000269834 DDX10Q13206 875 aaKnown RBP10.68□□□□□ -0.7
ZIM3-201ENST00000269834 TONSLQ96HA7 1378 aa10.67□□□□□ -0.7
ZIM3-201ENST00000269834 ANP32EQ9BTT0 268 aa10.67□□□□□ -0.7
ZIM3-201ENST00000269834 SSUH2Q9Y2M2 353 aa10.67□□□□□ -0.7
ZIM3-201ENST00000269834 ABCB7O75027 752 aa10.67□□□□□ -0.7
ZIM3-201ENST00000269834 TCOF1Q13428 1488 aaKnown RBP10.66□□□□□ -0.7
ZIM3-201ENST00000269834 NCOA2Q15596 1464 aa10.66□□□□□ -0.7
ZIM3-201ENST00000269834 ANP32CO43423 234 aa10.66□□□□□ -0.7
ZIM3-201ENST00000269834 CCDC125Q86Z20 511 aa10.66□□□□□ -0.7
ZIM3-201ENST00000269834 NAIPQ13075 1403 aa10.66□□□□□ -0.7
ZIM3-201ENST00000269834 POLR1AO95602 1720 aaPredicted RBP10.65□□□□□ -0.7
ZIM3-201ENST00000269834 NEFLP07196 543 aa10.65□□□□□ -0.71
ZIM3-201ENST00000269834 CCDC102AQ96A19 550 aa10.65□□□□□ -0.71
ZIM3-201ENST00000269834 BRPF3Q9ULD4 1205 aa10.64□□□□□ -0.71
ZIM3-201ENST00000269834 PTPRKQ15262 1439 aa10.64□□□□□ -0.71
ZIM3-201ENST00000269834 LARP6Q9BRS8 491 aaKnown RBP10.64□□□□□ -0.71
ZIM3-201ENST00000269834 TARBP1Q13395 1621 aaKnown RBP10.64□□□□□ -0.71
ZIM3-201ENST00000269834 SYNJ2O15056 1496 aa10.63□□□□□ -0.71
ZIM3-201ENST00000269834 MTUS2Q5JR59 1369 aa10.63□□□□□ -0.71
ZIM3-201ENST00000269834 GPR37O15354 613 aa10.63□□□□□ -0.71
ZIM3-201ENST00000269834 IGSF5Q9NSI5 407 aa10.63□□□□□ -0.71
ZIM3-201ENST00000269834 IVNS1ABPQ9Y6Y0 642 aa10.62□□□□□ -0.71
ZIM3-201ENST00000269834 AMOTL2Q9Y2J4 779 aa10.62□□□□□ -0.71
ZIM3-201ENST00000269834 IFT140Q96RY7 1462 aa10.61□□□□□ -0.71
ZIM3-201ENST00000269834 IRX6P78412 446 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms