RNA–Protein interactions for RNA: ENST00000268720.9

CPNE7-201, Transcript of copine 7, humanhuman

TSL 1 (best) BASIC

Gene CPNE7, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-201ENST00000268720 DHX29Q7Z478 1369 aaKnown RBP26.08■■□□□ 1.77
CPNE7-201ENST00000268720 SALL2Q9Y467 1007 aaPredicted RBP26.08■■□□□ 1.76
CPNE7-201ENST00000268720 RGL3Q3MIN7 710 aa26.06■■□□□ 1.76
CPNE7-201ENST00000268720 MYO5CQ9NQX4 1742 aa26.06■■□□□ 1.76
CPNE7-201ENST00000268720 PLEKHH2Q8IVE3 1493 aa26.06■■□□□ 1.76
CPNE7-201ENST00000268720 ST20-MTHFSA0A0A6YYL1 179 aa26.05■■□□□ 1.76
CPNE7-201ENST00000268720 MSH5O43196 834 aa26.05■■□□□ 1.76
CPNE7-201ENST00000268720 PLA2R1Q13018 1463 aa26.03■■□□□ 1.76
CPNE7-201ENST00000268720 CLASP1Q7Z460 1538 aa26.03■■□□□ 1.76
CPNE7-201ENST00000268720 MAST1Q9Y2H9 1570 aa26.03■■□□□ 1.76
CPNE7-201ENST00000268720 ZCCHC11Q5TAX3 1644 aaKnown RBP26.02■■□□□ 1.76
CPNE7-201ENST00000268720 CCDC144AA2RUR9 1427 aa26.01■■□□□ 1.76
CPNE7-201ENST00000268720 PLCH2O75038 1416 aa26■■□□□ 1.75
CPNE7-201ENST00000268720 UNC13BO14795 1591 aa25.98■■□□□ 1.75
CPNE7-201ENST00000268720 ROCK2O75116 1388 aaKnown RBP25.97■■□□□ 1.75
CPNE7-201ENST00000268720 EFCAB2Q5VUJ9 269 aa25.97■■□□□ 1.75
CPNE7-201ENST00000268720 ARID4BQ4LE39 1312 aaPredicted RBP25.96■■□□□ 1.75
CPNE7-201ENST00000268720 NBPF1Q3BBV0 1214 aa25.95■■□□□ 1.75
CPNE7-201ENST00000268720 PLXNC1O60486 1568 aa25.95■■□□□ 1.75
CPNE7-201ENST00000268720 TRAPPC8Q9Y2L5 1435 aa25.95■■□□□ 1.74
CPNE7-201ENST00000268720 UHRF1BP1LA0JNW5 1464 aa25.93■■□□□ 1.74
CPNE7-201ENST00000268720 PRAG1Q86YV5 1406 aa25.92■■□□□ 1.74
CPNE7-201ENST00000268720 DUOX2Q9NRD8 1548 aa25.91■■□□□ 1.74
CPNE7-201ENST00000268720 AFAP1Q8N556 730 aa25.91■■□□□ 1.74
CPNE7-201ENST00000268720 ZBED9Q6R2W3 1325 aa25.91■■□□□ 1.74
CPNE7-201ENST00000268720 A2MP01023 1474 aa25.89■■□□□ 1.74
CPNE7-201ENST00000268720 IQGAP3Q86VI3 1631 aa25.89■■□□□ 1.74
CPNE7-201ENST00000268720 ABCC1P33527 1531 aa25.88■■□□□ 1.73
CPNE7-201ENST00000268720 PPP4R2Q9NY27 417 aa25.88■■□□□ 1.73
CPNE7-201ENST00000268720 TRPM1Q7Z4N2 1603 aa25.86■■□□□ 1.73
CPNE7-201ENST00000268720 ERBINQ96RT1 1412 aa25.86■■□□□ 1.73
CPNE7-201ENST00000268720 MAGI2Q86UL8 1455 aa25.84■■□□□ 1.73
CPNE7-201ENST00000268720 TMC1Q8TDI8 760 aa25.82■■□□□ 1.72
CPNE7-201ENST00000268720 SPAG9O60271 1321 aaKnown RBP25.82■■□□□ 1.72
CPNE7-201ENST00000268720 PNISRQ8TF01 805 aaKnown RBP25.78■■□□□ 1.72
CPNE7-201ENST00000268720 ATP10AO60312 1499 aa25.78■■□□□ 1.72
CPNE7-201ENST00000268720 GPRASP1Q5JY77 1395 aa25.77■■□□□ 1.72
CPNE7-201ENST00000268720 FANCIQ9NVI1 1328 aa25.75■■□□□ 1.71
CPNE7-201ENST00000268720 TESK2Q96S53 571 aa25.74■■□□□ 1.71
CPNE7-201ENST00000268720 WDR7Q9Y4E6 1490 aa25.73■■□□□ 1.71
CPNE7-201ENST00000268720 ERICH6BQ5W0A0 696 aa25.73■■□□□ 1.71
CPNE7-201ENST00000268720 ZFYVE16Q7Z3T8 1539 aa25.73■■□□□ 1.71
CPNE7-201ENST00000268720 CC2D1BQ5T0F9 858 aaKnown RBP25.72■■□□□ 1.71
CPNE7-201ENST00000268720 DISP3Q9P2K9 1392 aa25.72■■□□□ 1.71
CPNE7-201ENST00000268720 E9PCH4 1651 aa25.72■■□□□ 1.71
CPNE7-201ENST00000268720 ERICH6Q7L0X2 663 aa25.71■■□□□ 1.71
CPNE7-201ENST00000268720 FANCAO15360 1455 aa25.7■■□□□ 1.7
CPNE7-201ENST00000268720 PRDM15P57071 1507 aaPredicted RBP25.69■■□□□ 1.7
CPNE7-201ENST00000268720 RTEL1-TNFRSF6BF6WH68 1400 aa25.69■■□□□ 1.7
CPNE7-201ENST00000268720 MYBBP1AQ9BQG0 1328 aaKnown RBP25.68■■□□□ 1.7
CPNE7-201ENST00000268720 PER1O15534 1290 aaPredicted RBP25.68■■□□□ 1.7
CPNE7-201ENST00000268720 ARAP3Q8WWN8 1544 aa25.68■■□□□ 1.7
CPNE7-201ENST00000268720 MYT1LQ9UL68 1186 aa25.67■■□□□ 1.7
CPNE7-201ENST00000268720 RALBP1Q15311 655 aa25.67■■□□□ 1.7
CPNE7-201ENST00000268720 NUDCQ9Y266 331 aa25.67■■□□□ 1.7
CPNE7-201ENST00000268720 SCAPERQ9BY12 1400 aa25.65■■□□□ 1.7
CPNE7-201ENST00000268720 COL17A1Q9UMD9 1497 aaPredicted RBP25.65■■□□□ 1.7
CPNE7-201ENST00000268720 CCDC136Q96JN2 1154 aa25.65■■□□□ 1.7
CPNE7-201ENST00000268720 BCL11AQ9H165 835 aa25.64■■□□□ 1.7
CPNE7-201ENST00000268720 KIF3BO15066 747 aa25.64■■□□□ 1.69
CPNE7-201ENST00000268720 BRD4O60885 1362 aaPredicted RBP25.63■■□□□ 1.69
CPNE7-201ENST00000268720 SMG6Q86US8 1419 aaKnown RBP25.62■■□□□ 1.69
CPNE7-201ENST00000268720 ABCA9Q8IUA7 1624 aa25.62■■□□□ 1.69
CPNE7-201ENST00000268720 SKAP1Q86WV1 359 aa25.62■■□□□ 1.69
CPNE7-201ENST00000268720 LAMC1P11047 1609 aa25.62■■□□□ 1.69
CPNE7-201ENST00000268720 LRPPRCP42704 1394 aaKnown RBP25.62■■□□□ 1.69
CPNE7-201ENST00000268720 ATP7AQ04656 1500 aa25.62■■□□□ 1.69
CPNE7-201ENST00000268720 EIF2AK4Q9P2K8 1649 aaKnown RBP25.61■■□□□ 1.69
CPNE7-201ENST00000268720 ASXL2Q76L83 1435 aa25.61■■□□□ 1.69
CPNE7-201ENST00000268720 ADGRL1O94910 1474 aa25.61■■□□□ 1.69
CPNE7-201ENST00000268720 CDCA7LQ96GN5 454 aa25.61■■□□□ 1.69
CPNE7-201ENST00000268720 PARD3Q8TEW0 1356 aa25.6■■□□□ 1.69
CPNE7-201ENST00000268720 PANK3Q9H999 370 aa25.6■■□□□ 1.69
CPNE7-201ENST00000268720 KTN1Q86UP2 1357 aaKnown RBP25.6■■□□□ 1.69
CPNE7-201ENST00000268720 TRPM2O94759 1503 aa25.58■■□□□ 1.69
CPNE7-201ENST00000268720 INO80Q9ULG1 1556 aaPredicted RBP25.58■■□□□ 1.69
CPNE7-201ENST00000268720 TMF1P82094 1093 aa25.58■■□□□ 1.68
CPNE7-201ENST00000268720 PTPRTO14522 1441 aa25.57■■□□□ 1.68
CPNE7-201ENST00000268720 DEPDC5O75140 1603 aa25.57■■□□□ 1.68
CPNE7-201ENST00000268720 PLIN1O60240 522 aa25.57■■□□□ 1.68
CPNE7-201ENST00000268720 NLRP13Q86W25 1043 aa25.57■■□□□ 1.68
CPNE7-201ENST00000268720 CLTCL1P53675 1640 aa25.56■■□□□ 1.68
CPNE7-201ENST00000268720 MADDQ8WXG6 1647 aa25.55■■□□□ 1.68
CPNE7-201ENST00000268720 RNF17Q9BXT8 1623 aaKnown RBP25.55■■□□□ 1.68
CPNE7-201ENST00000268720 SPHKAPQ2M3C7 1700 aa25.54■■□□□ 1.68
CPNE7-201ENST00000268720 NBR1Q14596 966 aa25.54■■□□□ 1.68
CPNE7-201ENST00000268720 PAK3O75914 559 aaPredicted RBP25.53■■□□□ 1.68
CPNE7-201ENST00000268720 EXOC6Q8TAG9 804 aa25.53■■□□□ 1.68
CPNE7-201ENST00000268720 KANK1Q14678 1352 aa25.52■■□□□ 1.68
CPNE7-201ENST00000268720 TET3O43151 1660 aa25.51■■□□□ 1.67
CPNE7-201ENST00000268720 VWDEQ8N2E2 1590 aa25.5■■□□□ 1.67
CPNE7-201ENST00000268720 UGGT1Q9NYU2 1555 aa25.5■■□□□ 1.67
CPNE7-201ENST00000268720 CEP152O94986 1710 aa25.5■■□□□ 1.67
CPNE7-201ENST00000268720 NPM2Q86SE8 214 aaKnown RBP25.5■■□□□ 1.67
CPNE7-201ENST00000268720 MROH1Q8NDA8 1641 aa25.48■■□□□ 1.67
CPNE7-201ENST00000268720 RNF123Q5XPI4 1314 aa25.47■■□□□ 1.67
CPNE7-201ENST00000268720 SENP3Q9H4L4 574 aaPredicted RBP25.46■■□□□ 1.67
CPNE7-201ENST00000268720 WASHC2CQ9Y4E1 1318 aa25.45■■□□□ 1.66
CPNE7-201ENST00000268720 OSCARQ8IYS5 282 aa25.45■■□□□ 1.66
CPNE7-201ENST00000268720 IQGAP1P46940 1657 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms