RNA–Protein interactions for RNA: ENST00000266674.9

LGR5-201, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LGR5, Length 4,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-201ENST00000266674 SMARCA4P51532 1647 aa17.33■□□□□ 0.36
LGR5-201ENST00000266674 SOX12O15370 315 aa17.32■□□□□ 0.36
LGR5-201ENST00000266674 RTF1Q92541 710 aaKnown RBP17.32■□□□□ 0.36
LGR5-201ENST00000266674 DDX49Q9Y6V7 483 aaKnown RBP17.31■□□□□ 0.36
LGR5-201ENST00000266674 APAF1O14727 1248 aa17.31■□□□□ 0.36
LGR5-201ENST00000266674 VSIG10Q8N0Z9 540 aa17.31■□□□□ 0.36
LGR5-201ENST00000266674 GGT6Q6P531 493 aa17.3■□□□□ 0.36
LGR5-201ENST00000266674 RSPH4AQ5TD94 716 aa17.3■□□□□ 0.36
LGR5-201ENST00000266674 A0A0G2JS52 829 aa17.3■□□□□ 0.36
LGR5-201ENST00000266674 SKOR2Q2VWA4 1001 aaPredicted RBP17.3■□□□□ 0.36
LGR5-201ENST00000266674 ATAD2BQ9ULI0 1458 aa17.3■□□□□ 0.36
LGR5-201ENST00000266674 CCDC144AA2RUR9 1427 aa17.3■□□□□ 0.36
LGR5-201ENST00000266674 EFCAB2Q5VUJ9 269 aa17.29■□□□□ 0.36
LGR5-201ENST00000266674 ST18O60284 1047 aa17.29■□□□□ 0.36
LGR5-201ENST00000266674 FGD6Q6ZV73 1430 aa17.29■□□□□ 0.36
LGR5-201ENST00000266674 CADPSQ9ULU8 1353 aa17.29■□□□□ 0.36
LGR5-201ENST00000266674 PAK3O75914 559 aaPredicted RBP17.29■□□□□ 0.36
LGR5-201ENST00000266674 ZKSCAN2Q63HK3 967 aa17.28■□□□□ 0.36
LGR5-201ENST00000266674 HMMRO75330 724 aa17.27■□□□□ 0.36
LGR5-201ENST00000266674 CHMP5Q9NZZ3 219 aa17.27■□□□□ 0.35
LGR5-201ENST00000266674 RRBP1Q9P2E9 1410 aaKnown RBP17.26■□□□□ 0.35
LGR5-201ENST00000266674 TRIM6-TRIM34B2RNG4 842 aa17.24■□□□□ 0.35
LGR5-201ENST00000266674 ERCC6Q03468 1493 aa17.24■□□□□ 0.35
LGR5-201ENST00000266674 LRRC9Q6ZRR7 1453 aa17.24■□□□□ 0.35
LGR5-201ENST00000266674 TERF2IPQ9NYB0 399 aa17.24■□□□□ 0.35
LGR5-201ENST00000266674 LMOD2Q6P5Q4 547 aa17.24■□□□□ 0.35
LGR5-201ENST00000266674 NOL8Q76FK4 1167 aaKnown RBP17.24■□□□□ 0.35
LGR5-201ENST00000266674 NGEFQ8N5V2 710 aa17.24■□□□□ 0.35
LGR5-201ENST00000266674 PHF14O94880 888 aa17.23■□□□□ 0.35
LGR5-201ENST00000266674 ANKRD45Q5TZF3 282 aa17.23■□□□□ 0.35
LGR5-201ENST00000266674 IGF1RP08069 1367 aa17.23■□□□□ 0.35
LGR5-201ENST00000266674 KIF3BO15066 747 aa17.23■□□□□ 0.35
LGR5-201ENST00000266674 AMER1Q5JTC6 1135 aaPredicted RBP17.23■□□□□ 0.35
LGR5-201ENST00000266674 PDS5BQ9NTI5 1447 aa17.23■□□□□ 0.35
LGR5-201ENST00000266674 HTATSF1O43719 755 aaKnown RBP17.22■□□□□ 0.35
LGR5-201ENST00000266674 FOXD4L5Q5VV16 416 aaPredicted RBP17.21■□□□□ 0.35
LGR5-201ENST00000266674 FOXD4L4Q8WXT5 416 aaPredicted RBP17.21■□□□□ 0.35
LGR5-201ENST00000266674 STK31Q9BXU1 1019 aa17.21■□□□□ 0.35
LGR5-201ENST00000266674 MYOM3Q5VTT5 1437 aa17.21■□□□□ 0.35
LGR5-201ENST00000266674 BRD4O60885 1362 aaPredicted RBP17.2■□□□□ 0.34
LGR5-201ENST00000266674 IL27Q8NEV9 243 aa17.2■□□□□ 0.34
LGR5-201ENST00000266674 CSPP1Q1MSJ5 1256 aa17.2■□□□□ 0.34
LGR5-201ENST00000266674 BRPF3Q9ULD4 1205 aa17.19■□□□□ 0.34
LGR5-201ENST00000266674 TRAK1Q9UPV9 953 aa17.19■□□□□ 0.34
LGR5-201ENST00000266674 SLC4A10Q6U841 1118 aa17.19■□□□□ 0.34
LGR5-201ENST00000266674 LMOD3Q0VAK6 560 aa17.18■□□□□ 0.34
LGR5-201ENST00000266674 DDX19BQ9UMR2 479 aa17.18■□□□□ 0.34
LGR5-201ENST00000266674 CDCA7LQ96GN5 454 aa17.17■□□□□ 0.34
LGR5-201ENST00000266674 ARAP1Q96P48 1450 aa17.17■□□□□ 0.34
LGR5-201ENST00000266674 HDGFP51858 240 aaKnown RBP17.17■□□□□ 0.34
LGR5-201ENST00000266674 AKNAQ7Z591 1439 aa17.17■□□□□ 0.34
LGR5-201ENST00000266674 DZIP1LQ8IYY4 767 aaKnown RBP17.16■□□□□ 0.34
LGR5-201ENST00000266674 SPAG9O60271 1321 aaKnown RBP17.16■□□□□ 0.34
LGR5-201ENST00000266674 ELL2O00472 640 aaPredicted RBP17.16■□□□□ 0.34
LGR5-201ENST00000266674 BACH2Q9BYV9 841 aa17.16■□□□□ 0.34
LGR5-201ENST00000266674 FRAT2O75474 233 aaPredicted RBP17.15■□□□□ 0.34
LGR5-201ENST00000266674 ANO8Q9HCE9 1232 aaPredicted RBP17.15■□□□□ 0.34
LGR5-201ENST00000266674 FAM43AQ8N2R8 423 aa17.15■□□□□ 0.34
LGR5-201ENST00000266674 C22orf23Q9BZE7 217 aa17.14■□□□□ 0.34
LGR5-201ENST00000266674 MSH5O43196 834 aa17.13■□□□□ 0.33
LGR5-201ENST00000266674 GNL2Q13823 731 aaKnown RBP17.13■□□□□ 0.33
LGR5-201ENST00000266674 MRE11P49959 708 aa17.13■□□□□ 0.33
LGR5-201ENST00000266674 ADAMTS8Q9UP79 889 aa17.13■□□□□ 0.33
LGR5-201ENST00000266674 CCDC184Q52MB2 194 aa17.12■□□□□ 0.33
LGR5-201ENST00000266674 CHMP4AQ9BY43 222 aa17.12■□□□□ 0.33
LGR5-201ENST00000266674 CUX1P39880 1505 aa17.12■□□□□ 0.33
LGR5-201ENST00000266674 PANK1Q8TE04 598 aa17.12■□□□□ 0.33
LGR5-201ENST00000266674 AAMPQ13685 434 aa17.11■□□□□ 0.33
LGR5-201ENST00000266674 KIF16BQ96L93 1317 aa17.11■□□□□ 0.33
LGR5-201ENST00000266674 FAM13BQ9NYF5 915 aa17.11■□□□□ 0.33
LGR5-201ENST00000266674 FOXD4L6Q3SYB3 417 aaPredicted RBP17.11■□□□□ 0.33
LGR5-201ENST00000266674 FOXD4L3Q6VB84 417 aaPredicted RBP17.11■□□□□ 0.33
LGR5-201ENST00000266674 JPH4Q96JJ6 628 aa17.11■□□□□ 0.33
LGR5-201ENST00000266674 MIA2Q96PC5 1412 aa17.11■□□□□ 0.33
LGR5-201ENST00000266674 ZNF644Q9H582 1327 aaPredicted RBP17.11■□□□□ 0.33
LGR5-201ENST00000266674 GPATCH3Q96I76 525 aa17.1■□□□□ 0.33
LGR5-201ENST00000266674 PNISRQ8TF01 805 aaKnown RBP17.1■□□□□ 0.33
LGR5-201ENST00000266674 TPM4P67936 248 aa17.09■□□□□ 0.33
LGR5-201ENST00000266674 MLECQ14165 292 aa17.09■□□□□ 0.33
LGR5-201ENST00000266674 NUTM2DQ5VT03 806 aaPredicted RBP17.09■□□□□ 0.33
LGR5-201ENST00000266674 ATP6V1DQ9Y5K8 247 aa17.09■□□□□ 0.33
LGR5-201ENST00000266674 REC8O95072 547 aa17.09■□□□□ 0.33
LGR5-201ENST00000266674 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.09■□□□□ 0.33
LGR5-201ENST00000266674 SMG6Q86US8 1419 aaKnown RBP17.09■□□□□ 0.33
LGR5-201ENST00000266674 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.08■□□□□ 0.332e-6■■■■□ 20.9
LGR5-201ENST00000266674 RUNDC1Q96C34 613 aa17.08■□□□□ 0.33
LGR5-201ENST00000266674 WDR97A6NE52 1622 aa17.08■□□□□ 0.32
LGR5-201ENST00000266674 RILPL2Q969X0 211 aa17.08■□□□□ 0.32
LGR5-201ENST00000266674 HDAC5Q9UQL6 1122 aa17.08■□□□□ 0.32
LGR5-201ENST00000266674 TNNT3P45378 269 aaPredicted RBP17.08■□□□□ 0.32
LGR5-201ENST00000266674 LNPKQ9C0E8 428 aa17.07■□□□□ 0.32
LGR5-201ENST00000266674 ERICH3Q5RHP9 1530 aa17.07■□□□□ 0.32
LGR5-201ENST00000266674 NCOA2Q15596 1464 aa17.07■□□□□ 0.32
LGR5-201ENST00000266674 CASKIN1Q8WXD9 1431 aa17.07■□□□□ 0.32
LGR5-201ENST00000266674 TRAK2O60296 914 aa17.07■□□□□ 0.32
LGR5-201ENST00000266674 NUCB2P80303 420 aa17.07■□□□□ 0.32
LGR5-201ENST00000266674 HSP90B1P14625 803 aaKnown RBP17.06■□□□□ 0.32
LGR5-201ENST00000266674 NBPF8Q3BBV2 869 aa17.06■□□□□ 0.32
LGR5-201ENST00000266674 FGD5Q6ZNL6 1462 aa17.05■□□□□ 0.32
LGR5-201ENST00000266674 EVC2Q86UK5 1308 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 270.8 ms