RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 ARHGEF5Q12774 1597 aa17.14■□□□□ 0.33
BEST3-201ENST00000266661 FANCAO15360 1455 aa17.14■□□□□ 0.33
BEST3-201ENST00000266661 ZBED9Q6R2W3 1325 aa17.14■□□□□ 0.33
BEST3-201ENST00000266661 RBM19Q9Y4C8 960 aaKnown RBP17.14■□□□□ 0.33
BEST3-201ENST00000266661 ARHGEF12Q9NZN5 1544 aa17.13■□□□□ 0.33
BEST3-201ENST00000266661 RALGAPBQ86X10 1494 aa17.13■□□□□ 0.33
BEST3-201ENST00000266661 USP47Q96K76 1375 aa17.13■□□□□ 0.33
BEST3-201ENST00000266661 MRS2Q9HD23 443 aa17.12■□□□□ 0.33
BEST3-201ENST00000266661 RAPGEF3O95398 923 aa17.1■□□□□ 0.33
BEST3-201ENST00000266661 EFCAB2Q5VUJ9 269 aa17.09■□□□□ 0.33
BEST3-201ENST00000266661 ANP32EQ9BTT0 268 aa17.09■□□□□ 0.33
BEST3-201ENST00000266661 NUP155O75694 1391 aa17.09■□□□□ 0.33
BEST3-201ENST00000266661 SAMD9LQ8IVG5 1584 aa17.08■□□□□ 0.32
BEST3-201ENST00000266661 FAM9BQ8IZU0 186 aa17.07■□□□□ 0.32
BEST3-201ENST00000266661 HNRNPMP52272 730 aaKnown RBP eCLIP17.06■□□□□ 0.32
BEST3-201ENST00000266661 ADGRL1O94910 1474 aa17.05■□□□□ 0.32
BEST3-201ENST00000266661 NEO1Q92859 1461 aa17.05■□□□□ 0.32
BEST3-201ENST00000266661 KIF15Q9NS87 1388 aa17.05■□□□□ 0.32
BEST3-201ENST00000266661 SCAPERQ9BY12 1400 aa17.05■□□□□ 0.32
BEST3-201ENST00000266661 ARAP3Q8WWN8 1544 aa17.04■□□□□ 0.32
BEST3-201ENST00000266661 IRX6P78412 446 aaPredicted RBP17.04■□□□□ 0.32
BEST3-201ENST00000266661 CFAP74Q9C0B2 1584 aa17.04■□□□□ 0.32
BEST3-201ENST00000266661 AFAP1Q8N556 730 aa17.03■□□□□ 0.32
BEST3-201ENST00000266661 PPP4R2Q9NY27 417 aa17.03■□□□□ 0.32
BEST3-201ENST00000266661 ROCK2O75116 1388 aaKnown RBP17.03■□□□□ 0.32
BEST3-201ENST00000266661 RICTORQ6R327 1708 aa17.03■□□□□ 0.32
BEST3-201ENST00000266661 TSPY4P0CV99 314 aa17.03■□□□□ 0.32
BEST3-201ENST00000266661 TSPY10P0CW01 314 aa17.03■□□□□ 0.32
BEST3-201ENST00000266661 CCDC141Q6ZP82 1450 aa17.02■□□□□ 0.32
BEST3-201ENST00000266661 SYCP2Q9BX26 1530 aa17.02■□□□□ 0.32
BEST3-201ENST00000266661 FRMPD1Q5SYB0 1578 aa17.02■□□□□ 0.32
BEST3-201ENST00000266661 SMG6Q86US8 1419 aaKnown RBP17.01■□□□□ 0.31
BEST3-201ENST00000266661 ABCC1P33527 1531 aa17.01■□□□□ 0.31
BEST3-201ENST00000266661 TRAPPC8Q9Y2L5 1435 aa17.01■□□□□ 0.31
BEST3-201ENST00000266661 MAST1Q9Y2H9 1570 aa17■□□□□ 0.31
BEST3-201ENST00000266661 RSPH4AQ5TD94 716 aa16.99■□□□□ 0.31
BEST3-201ENST00000266661 FAM135AQ9P2D6 1515 aa16.99■□□□□ 0.31
BEST3-201ENST00000266661 RNF123Q5XPI4 1314 aa16.99■□□□□ 0.31
BEST3-201ENST00000266661 ZNF326Q5BKZ1 582 aaKnown RBP16.97■□□□□ 0.31
BEST3-201ENST00000266661 E9PCH4 1651 aa16.97■□□□□ 0.31
BEST3-201ENST00000266661 PNISRQ8TF01 805 aaKnown RBP16.97■□□□□ 0.31
BEST3-201ENST00000266661 CARD11Q9BXL7 1154 aa16.97■□□□□ 0.31
BEST3-201ENST00000266661 UNC13BO14795 1591 aa16.97■□□□□ 0.31
BEST3-201ENST00000266661 PLA2R1Q13018 1463 aa16.96■□□□□ 0.31
BEST3-201ENST00000266661 POGZQ7Z3K3 1410 aa16.95■□□□□ 0.3
BEST3-201ENST00000266661 LRPPRCP42704 1394 aaKnown RBP16.95■□□□□ 0.3
BEST3-201ENST00000266661 FANCIQ9NVI1 1328 aa16.95■□□□□ 0.3
BEST3-201ENST00000266661 KTN1Q86UP2 1357 aaKnown RBP16.94■□□□□ 0.3
BEST3-201ENST00000266661 TRPM1Q7Z4N2 1603 aa16.93■□□□□ 0.3
BEST3-201ENST00000266661 PRAG1Q86YV5 1406 aa16.93■□□□□ 0.3
BEST3-201ENST00000266661 ST20-MTHFSA0A0A6YYL1 179 aa16.93■□□□□ 0.3
BEST3-201ENST00000266661 MYT1LQ9UL68 1186 aa16.93■□□□□ 0.3
BEST3-201ENST00000266661 MSH5O43196 834 aa16.93■□□□□ 0.3
BEST3-201ENST00000266661 GPRASP1Q5JY77 1395 aa16.92■□□□□ 0.3
BEST3-201ENST00000266661 DCAF11Q8TEB1 546 aa16.92■□□□□ 0.3
BEST3-201ENST00000266661 NUDCQ9Y266 331 aa16.92■□□□□ 0.3
BEST3-201ENST00000266661 YEATS2Q9ULM3 1422 aa16.91■□□□□ 0.3
BEST3-201ENST00000266661 PLXNC1O60486 1568 aa16.91■□□□□ 0.3
BEST3-201ENST00000266661 ZNF518AQ6AHZ1 1483 aa16.91■□□□□ 0.3
BEST3-201ENST00000266661 KIDINS220Q9ULH0 1771 aa16.9■□□□□ 0.3
BEST3-201ENST00000266661 BRD4O60885 1362 aaPredicted RBP16.9■□□□□ 0.3
BEST3-201ENST00000266661 LAMC1P11047 1609 aa16.9■□□□□ 0.3
BEST3-201ENST00000266661 IQGAP3Q86VI3 1631 aa16.89■□□□□ 0.29
BEST3-201ENST00000266661 KDM2AQ9Y2K7 1162 aa16.89■□□□□ 0.29
BEST3-201ENST00000266661 SIGLEC1Q9BZZ2 1709 aa16.89■□□□□ 0.29
BEST3-201ENST00000266661 ATP10AO60312 1499 aa16.89■□□□□ 0.29
BEST3-201ENST00000266661 MAGI2Q86UL8 1455 aa16.89■□□□□ 0.29
BEST3-201ENST00000266661 A2MP01023 1474 aa16.88■□□□□ 0.29
BEST3-201ENST00000266661 PLEKHH2Q8IVE3 1493 aa16.88■□□□□ 0.29
BEST3-201ENST00000266661 RALBP1Q15311 655 aa16.88■□□□□ 0.29
BEST3-201ENST00000266661 CCDC144AA2RUR9 1427 aa16.87■□□□□ 0.29
BEST3-201ENST00000266661 POLR3GLQ9BT43 218 aa16.87■□□□□ 0.29
BEST3-201ENST00000266661 HECW2Q9P2P5 1572 aa16.87■□□□□ 0.29
BEST3-201ENST00000266661 ZMYM4Q5VZL5 1548 aa16.86■□□□□ 0.29
BEST3-201ENST00000266661 SPAG9O60271 1321 aaKnown RBP16.86■□□□□ 0.29
BEST3-201ENST00000266661 MYBBP1AQ9BQG0 1328 aaKnown RBP16.86■□□□□ 0.29
BEST3-201ENST00000266661 B4GALNT3Q6L9W6 998 aa16.86■□□□□ 0.29
BEST3-201ENST00000266661 ABCA6Q8N139 1617 aa16.85■□□□□ 0.29
BEST3-201ENST00000266661 PRDM15P57071 1507 aaPredicted RBP16.85■□□□□ 0.29
BEST3-201ENST00000266661 PER1O15534 1290 aaPredicted RBP16.84■□□□□ 0.29
BEST3-201ENST00000266661 PARD3Q8TEW0 1356 aa16.84■□□□□ 0.29
BEST3-201ENST00000266661 ZFYVE16Q7Z3T8 1539 aa16.84■□□□□ 0.29
BEST3-201ENST00000266661 TMC1Q8TDI8 760 aa16.84■□□□□ 0.29
BEST3-201ENST00000266661 DUOX2Q9NRD8 1548 aa16.83■□□□□ 0.29
BEST3-201ENST00000266661 ATP7AQ04656 1500 aa16.83■□□□□ 0.28
BEST3-201ENST00000266661 INO80Q9ULG1 1556 aaPredicted RBP16.83■□□□□ 0.28
BEST3-201ENST00000266661 NBPF1Q3BBV0 1214 aa16.82■□□□□ 0.28
BEST3-201ENST00000266661 DIP2CQ9Y2E4 1556 aa16.82■□□□□ 0.28
BEST3-201ENST00000266661 MLH3Q9UHC1 1453 aa16.82■□□□□ 0.28
BEST3-201ENST00000266661 ERBINQ96RT1 1412 aa16.81■□□□□ 0.28
BEST3-201ENST00000266661 TESK2Q96S53 571 aa16.81■□□□□ 0.28
BEST3-201ENST00000266661 ARHGEF40Q8TER5 1519 aa16.81■□□□□ 0.28
BEST3-201ENST00000266661 EIF2AK4Q9P2K8 1649 aaKnown RBP16.79■□□□□ 0.28
BEST3-201ENST00000266661 CNGB1Q14028 1251 aaPredicted RBP16.78■□□□□ 0.28
BEST3-201ENST00000266661 INSRP06213 1382 aa16.78■□□□□ 0.28
BEST3-201ENST00000266661 WASHC2CQ9Y4E1 1318 aa16.78■□□□□ 0.28
BEST3-201ENST00000266661 MLECQ14165 292 aa16.77■□□□□ 0.27
BEST3-201ENST00000266661 RNF17Q9BXT8 1623 aaKnown RBP16.76■□□□□ 0.27
BEST3-201ENST00000266661 NLRP13Q86W25 1043 aa16.76■□□□□ 0.27
BEST3-201ENST00000266661 DISP3Q9P2K9 1392 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms