RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 PLEKHH2Q8IVE3 1493 aa14.11□□□□□ -0.15
LSG1-201ENST00000265245 SYCP2Q9BX26 1530 aa14.11□□□□□ -0.15
LSG1-201ENST00000265245 CDC42BPBQ9Y5S2 1711 aa14.11□□□□□ -0.15
LSG1-201ENST00000265245 ROCK2O75116 1388 aaKnown RBP14.11□□□□□ -0.15
LSG1-201ENST00000265245 FAM135AQ9P2D6 1515 aa14.1□□□□□ -0.15
LSG1-201ENST00000265245 KDM5CP41229 1560 aa14.09□□□□□ -0.15
LSG1-201ENST00000265245 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.09□□□□□ -0.15
LSG1-201ENST00000265245 CCDC144AA2RUR9 1427 aa14.09□□□□□ -0.15
LSG1-201ENST00000265245 TTC37Q6PGP7 1564 aa14.09□□□□□ -0.15
LSG1-201ENST00000265245 ZBED9Q6R2W3 1325 aa14.08□□□□□ -0.15
LSG1-201ENST00000265245 DHX29Q7Z478 1369 aaKnown RBP14.08□□□□□ -0.16
LSG1-201ENST00000265245 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.07□□□□□ -0.165e-6■□□□□ 9.8
LSG1-201ENST00000265245 MAST1Q9Y2H9 1570 aa14.07□□□□□ -0.16
LSG1-201ENST00000265245 ST20-MTHFSA0A0A6YYL1 179 aa14.06□□□□□ -0.16
LSG1-201ENST00000265245 BCORL1Q5H9F3 1711 aa14.05□□□□□ -0.16
LSG1-201ENST00000265245 CNGB1Q14028 1251 aaPredicted RBP14.05□□□□□ -0.16
LSG1-201ENST00000265245 EFCAB2Q5VUJ9 269 aa14.05□□□□□ -0.16
LSG1-201ENST00000265245 DNAJC5Q9H3Z4 198 aa14.04□□□□□ -0.16
LSG1-201ENST00000265245 ABCA9Q8IUA7 1624 aa14.04□□□□□ -0.16
LSG1-201ENST00000265245 GLI2P10070 1586 aa14.03□□□□□ -0.16
LSG1-201ENST00000265245 ERICH6BQ5W0A0 696 aa14.03□□□□□ -0.16
LSG1-201ENST00000265245 PLCH2O75038 1416 aa14.03□□□□□ -0.16
LSG1-201ENST00000265245 MYO5CQ9NQX4 1742 aa14.03□□□□□ -0.16
LSG1-201ENST00000265245 RGL3Q3MIN7 710 aa14.02□□□□□ -0.16
LSG1-201ENST00000265245 PLXNC1O60486 1568 aa14.02□□□□□ -0.16
LSG1-201ENST00000265245 UNC13BO14795 1591 aa14.02□□□□□ -0.17
LSG1-201ENST00000265245 IRX6P78412 446 aaPredicted RBP14.02□□□□□ -0.17
LSG1-201ENST00000265245 DUOX2Q9NRD8 1548 aa14.01□□□□□ -0.17
LSG1-201ENST00000265245 PRAG1Q86YV5 1406 aa14.01□□□□□ -0.17
LSG1-201ENST00000265245 ERBINQ96RT1 1412 aa14.01□□□□□ -0.17
LSG1-201ENST00000265245 ARAP3Q8WWN8 1544 aa14□□□□□ -0.17
LSG1-201ENST00000265245 WDR7Q9Y4E6 1490 aa14□□□□□ -0.17
LSG1-201ENST00000265245 MAP3K4Q9Y6R4 1608 aa14□□□□□ -0.17
LSG1-201ENST00000265245 TMC1Q8TDI8 760 aa13.99□□□□□ -0.17
LSG1-201ENST00000265245 PLA2R1Q13018 1463 aa13.99□□□□□ -0.17
LSG1-201ENST00000265245 KIF13AQ9H1H9 1805 aa13.99□□□□□ -0.17
LSG1-201ENST00000265245 KTN1Q86UP2 1357 aaKnown RBP13.98□□□□□ -0.17
LSG1-201ENST00000265245 DIP2BQ9P265 1576 aa13.98□□□□□ -0.17
LSG1-201ENST00000265245 IQGAP3Q86VI3 1631 aa13.97□□□□□ -0.17
LSG1-201ENST00000265245 RALBP1Q15311 655 aa13.97□□□□□ -0.17
LSG1-201ENST00000265245 PPRC1Q5VV67 1664 aaKnown RBP13.96□□□□□ -0.17
LSG1-201ENST00000265245 A2MP01023 1474 aa13.96□□□□□ -0.17
LSG1-201ENST00000265245 GPRASP1Q5JY77 1395 aa13.96□□□□□ -0.17
LSG1-201ENST00000265245 PPP4R2Q9NY27 417 aa13.96□□□□□ -0.17
LSG1-201ENST00000265245 ASXL2Q76L83 1435 aa13.96□□□□□ -0.18
LSG1-201ENST00000265245 ATP10AO60312 1499 aa13.96□□□□□ -0.18
LSG1-201ENST00000265245 MAGI2Q86UL8 1455 aa13.96□□□□□ -0.18
LSG1-201ENST00000265245 ABCC1P33527 1531 aa13.95□□□□□ -0.18
LSG1-201ENST00000265245 SPAG9O60271 1321 aaKnown RBP13.95□□□□□ -0.18
LSG1-201ENST00000265245 NBPF1Q3BBV0 1214 aa13.95□□□□□ -0.18
LSG1-201ENST00000265245 PNISRQ8TF01 805 aaKnown RBP13.94□□□□□ -0.18
LSG1-201ENST00000265245 TRAPPC8Q9Y2L5 1435 aa13.94□□□□□ -0.18
LSG1-201ENST00000265245 MYBBP1AQ9BQG0 1328 aaKnown RBP13.94□□□□□ -0.18
LSG1-201ENST00000265245 BRD4O60885 1362 aaPredicted RBP13.93□□□□□ -0.18
LSG1-201ENST00000265245 TRPM1Q7Z4N2 1603 aa13.93□□□□□ -0.18
LSG1-201ENST00000265245 PLEKHG5O94827 1062 aa13.93□□□□□ -0.18
LSG1-201ENST00000265245 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.93□□□□□ -0.18
LSG1-201ENST00000265245 SMG6Q86US8 1419 aaKnown RBP13.93□□□□□ -0.18
LSG1-201ENST00000265245 RBM19Q9Y4C8 960 aaKnown RBP13.92□□□□□ -0.18
LSG1-201ENST00000265245 RTEL1-TNFRSF6BF6WH68 1400 aa13.91□□□□□ -0.18
LSG1-201ENST00000265245 NUDCQ9Y266 331 aa13.91□□□□□ -0.18
LSG1-201ENST00000265245 AFAP1Q8N556 730 aa13.91□□□□□ -0.18
LSG1-201ENST00000265245 EIF2AK4Q9P2K8 1649 aaKnown RBP13.9□□□□□ -0.18
LSG1-201ENST00000265245 NLRP13Q86W25 1043 aa13.89□□□□□ -0.19
LSG1-201ENST00000265245 TMF1P82094 1093 aa13.88□□□□□ -0.19
LSG1-201ENST00000265245 COL17A1Q9UMD9 1497 aaPredicted RBP13.88□□□□□ -0.19
LSG1-201ENST00000265245 PRDM15P57071 1507 aaPredicted RBP13.88□□□□□ -0.19
LSG1-201ENST00000265245 LAMC1P11047 1609 aa13.88□□□□□ -0.19
LSG1-201ENST00000265245 TESK2Q96S53 571 aa13.88□□□□□ -0.19
LSG1-201ENST00000265245 LRPPRCP42704 1394 aaKnown RBP13.88□□□□□ -0.19
LSG1-201ENST00000265245 SALL2Q9Y467 1007 aaPredicted RBP13.87□□□□□ -0.19
LSG1-201ENST00000265245 WASHC2CQ9Y4E1 1318 aa13.87□□□□□ -0.19
LSG1-201ENST00000265245 CFAP74Q9C0B2 1584 aa13.87□□□□□ -0.19
LSG1-201ENST00000265245 E9PCH4 1651 aa13.86□□□□□ -0.19
LSG1-201ENST00000265245 PARD3Q8TEW0 1356 aa13.86□□□□□ -0.19
LSG1-201ENST00000265245 CYB5RLQ6IPT4 315 aa13.86□□□□□ -0.19
LSG1-201ENST00000265245 MYT1LQ9UL68 1186 aa13.86□□□□□ -0.19
LSG1-201ENST00000265245 ZFYVE16Q7Z3T8 1539 aa13.86□□□□□ -0.19
LSG1-201ENST00000265245 KANK1Q14678 1352 aa13.86□□□□□ -0.19
LSG1-201ENST00000265245 STAC3Q96MF2 364 aa13.86□□□□□ -0.19
LSG1-201ENST00000265245 DISP3Q9P2K9 1392 aa13.85□□□□□ -0.19
LSG1-201ENST00000265245 PER1O15534 1290 aaPredicted RBP13.85□□□□□ -0.19
LSG1-201ENST00000265245 RTN4Q9NQC3 1192 aaKnown RBP13.85□□□□□ -0.19
LSG1-201ENST00000265245 FANCAO15360 1455 aa13.85□□□□□ -0.19
LSG1-201ENST00000265245 B4GALNT3Q6L9W6 998 aa13.84□□□□□ -0.19
LSG1-201ENST00000265245 TRPM2O94759 1503 aa13.83□□□□□ -0.2
LSG1-201ENST00000265245 SENP3-EIF4A1A0A087X0R7 540 aa13.82□□□□□ -0.2
LSG1-201ENST00000265245 PANK3Q9H999 370 aa13.82□□□□□ -0.2
LSG1-201ENST00000265245 PTPRTO14522 1441 aa13.82□□□□□ -0.2
LSG1-201ENST00000265245 RNF123Q5XPI4 1314 aa13.82□□□□□ -0.2
LSG1-201ENST00000265245 KIF3BO15066 747 aa13.82□□□□□ -0.2
LSG1-201ENST00000265245 CC2D1BQ5T0F9 858 aaKnown RBP13.81□□□□□ -0.2
LSG1-201ENST00000265245 ATP7AQ04656 1500 aa13.81□□□□□ -0.2
LSG1-201ENST00000265245 ADGRL1O94910 1474 aa13.81□□□□□ -0.2
LSG1-201ENST00000265245 SCAPERQ9BY12 1400 aa13.81□□□□□ -0.2
LSG1-201ENST00000265245 CDCA8Q53HL2 280 aa13.8□□□□□ -0.2
LSG1-201ENST00000265245 RNF17Q9BXT8 1623 aaKnown RBP13.79□□□□□ -0.2
LSG1-201ENST00000265245 RICTORQ6R327 1708 aa13.78□□□□□ -0.2
LSG1-201ENST00000265245 INO80Q9ULG1 1556 aaPredicted RBP13.78□□□□□ -0.2
LSG1-201ENST00000265245 DEPDC5O75140 1603 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms