RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 DHX29Q7Z478 1369 aaKnown RBP22.44■■□□□ 1.18
VPS26A-201ENST00000263559 KDM5CP41229 1560 aa22.44■■□□□ 1.18
VPS26A-201ENST00000263559 DEPDC5O75140 1603 aa22.43■■□□□ 1.18
VPS26A-201ENST00000263559 PLA2R1Q13018 1463 aa22.42■■□□□ 1.18
VPS26A-201ENST00000263559 EIF2AK4Q9P2K8 1649 aaKnown RBP22.4■■□□□ 1.18
VPS26A-201ENST00000263559 KIF3BO15066 747 aa22.4■■□□□ 1.18
VPS26A-201ENST00000263559 MLH3Q9UHC1 1453 aa22.39■■□□□ 1.17
VPS26A-201ENST00000263559 CCDC144AA2RUR9 1427 aa22.39■■□□□ 1.17
VPS26A-201ENST00000263559 DIP2BQ9P265 1576 aa22.38■■□□□ 1.17
VPS26A-201ENST00000263559 FAM69CQ0P6D2 419 aa22.38■■□□□ 1.17
VPS26A-201ENST00000263559 HSPA5P11021 654 aaKnown RBP22.37■■□□□ 1.17
VPS26A-201ENST00000263559 HECW2Q9P2P5 1572 aa22.37■■□□□ 1.17
VPS26A-201ENST00000263559 RAPGEF3O95398 923 aa22.37■■□□□ 1.17
VPS26A-201ENST00000263559 EIF4G2P78344 907 aaKnown RBP eCLIP22.36■■□□□ 1.17
VPS26A-201ENST00000263559 DDX10Q13206 875 aaKnown RBP22.36■■□□□ 1.17
VPS26A-201ENST00000263559 E9PCH4 1651 aa22.36■■□□□ 1.17
VPS26A-201ENST00000263559 ATP10AO60312 1499 aa22.35■■□□□ 1.17
VPS26A-201ENST00000263559 A2MP01023 1474 aa22.35■■□□□ 1.17
VPS26A-201ENST00000263559 VWDEQ8N2E2 1590 aa22.34■■□□□ 1.17
VPS26A-201ENST00000263559 MROH1Q8NDA8 1641 aa22.33■■□□□ 1.17
VPS26A-201ENST00000263559 KANK1Q14678 1352 aa22.33■■□□□ 1.17
VPS26A-201ENST00000263559 ZNF326Q5BKZ1 582 aaKnown RBP22.33■■□□□ 1.17
VPS26A-201ENST00000263559 PRDM15P57071 1507 aaPredicted RBP22.32■■□□□ 1.16
VPS26A-201ENST00000263559 RICTORQ6R327 1708 aa22.32■■□□□ 1.16
VPS26A-201ENST00000263559 TET3O43151 1660 aa22.32■■□□□ 1.16
VPS26A-201ENST00000263559 UHRF1BP1Q6BDS2 1440 aa22.31■■□□□ 1.16
VPS26A-201ENST00000263559 ABCA6Q8N139 1617 aa22.31■■□□□ 1.16
VPS26A-201ENST00000263559 DCAF11Q8TEB1 546 aa22.31■■□□□ 1.16
VPS26A-201ENST00000263559 FRMPD1Q5SYB0 1578 aa22.3■■□□□ 1.16
VPS26A-201ENST00000263559 KDM2AQ9Y2K7 1162 aa22.3■■□□□ 1.16
VPS26A-201ENST00000263559 TSPOAP1O95153 1857 aa22.3■■□□□ 1.16
VPS26A-201ENST00000263559 RGL3Q3MIN7 710 aa22.27■■□□□ 1.16
VPS26A-201ENST00000263559 RNF17Q9BXT8 1623 aaKnown RBP22.26■■□□□ 1.15
VPS26A-201ENST00000263559 PPRC1Q5VV67 1664 aaKnown RBP22.26■■□□□ 1.15
VPS26A-201ENST00000263559 SPHKAPQ2M3C7 1700 aa22.26■■□□□ 1.15
VPS26A-201ENST00000263559 SPATA31E1Q6ZUB1 1445 aa22.25■■□□□ 1.15
VPS26A-201ENST00000263559 PTPRTO14522 1441 aa22.24■■□□□ 1.15
VPS26A-201ENST00000263559 DIP2CQ9Y2E4 1556 aa22.24■■□□□ 1.15
VPS26A-201ENST00000263559 TRPM2O94759 1503 aa22.24■■□□□ 1.15
VPS26A-201ENST00000263559 RALGAPBQ86X10 1494 aa22.23■■□□□ 1.15
VPS26A-201ENST00000263559 BCORL1Q5H9F3 1711 aa22.23■■□□□ 1.15
VPS26A-201ENST00000263559 WASHC2AQ641Q2 1341 aa22.22■■□□□ 1.15
VPS26A-201ENST00000263559 CEP152O94986 1710 aa22.22■■□□□ 1.15
VPS26A-201ENST00000263559 KIF13AQ9H1H9 1805 aa22.2■■□□□ 1.15
VPS26A-201ENST00000263559 GGT6Q6P531 493 aa22.2■■□□□ 1.14
VPS26A-201ENST00000263559 EFCAB6Q5THR3 1501 aa22.2■■□□□ 1.14
VPS26A-201ENST00000263559 LMTK2Q8IWU2 1503 aa22.2■■□□□ 1.14
VPS26A-201ENST00000263559 YEATS2Q9ULM3 1422 aa22.19■■□□□ 1.14
VPS26A-201ENST00000263559 C11orf95C9JLR9 678 aaPredicted RBP22.19■■□□□ 1.14
VPS26A-201ENST00000263559 CLTCL1P53675 1640 aa22.18■■□□□ 1.14
VPS26A-201ENST00000263559 PRAG1Q86YV5 1406 aa22.18■■□□□ 1.14
VPS26A-201ENST00000263559 USP47Q96K76 1375 aa22.17■■□□□ 1.14
VPS26A-201ENST00000263559 YTHDC1Q96MU7 727 aaKnown RBP22.15■■□□□ 1.14
VPS26A-201ENST00000263559 CARD11Q9BXL7 1154 aa22.15■■□□□ 1.14
VPS26A-201ENST00000263559 ZMYM4Q5VZL5 1548 aa22.15■■□□□ 1.14
VPS26A-201ENST00000263559 TRPM1Q7Z4N2 1603 aa22.15■■□□□ 1.14
VPS26A-201ENST00000263559 POLR1AO95602 1720 aaPredicted RBP22.13■■□□□ 1.13
VPS26A-201ENST00000263559 CCDC7Q96M83 1385 aa22.13■■□□□ 1.13
VPS26A-201ENST00000263559 ROCK2O75116 1388 aaKnown RBP22.11■■□□□ 1.13
VPS26A-201ENST00000263559 WASHC2CQ9Y4E1 1318 aa22.11■■□□□ 1.13
VPS26A-201ENST00000263559 CFAP65Q6ZU64 1925 aaKnown RBP22.1■■□□□ 1.13
VPS26A-201ENST00000263559 ABCC3O15438 1527 aa22.1■■□□□ 1.13
VPS26A-201ENST00000263559 UGGT1Q9NYU2 1555 aa22.1■■□□□ 1.13
VPS26A-201ENST00000263559 NPATQ14207 1427 aa22.09■■□□□ 1.13
VPS26A-201ENST00000263559 KIF7Q2M1P5 1343 aa22.08■■□□□ 1.13
VPS26A-201ENST00000263559 NBPF1Q3BBV0 1214 aa22.08■■□□□ 1.12
VPS26A-201ENST00000263559 ANP32CO43423 234 aa22.07■■□□□ 1.12
VPS26A-201ENST00000263559 CENPBP07199 599 aaPredicted RBP22.06■■□□□ 1.12
VPS26A-201ENST00000263559 CAMSAP1Q5T5Y3 1602 aa22.06■■□□□ 1.12
VPS26A-201ENST00000263559 KIF1BO60333 1816 aa22.06■■□□□ 1.12
VPS26A-201ENST00000263559 NEURL4Q96JN8 1562 aa22.05■■□□□ 1.12
VPS26A-201ENST00000263559 GPRASP1Q5JY77 1395 aa22.04■■□□□ 1.12
VPS26A-201ENST00000263559 COL17A1Q9UMD9 1497 aaPredicted RBP22.04■■□□□ 1.12
VPS26A-201ENST00000263559 ST20-MTHFSA0A0A6YYL1 179 aa22.03■■□□□ 1.12
VPS26A-201ENST00000263559 CNTLNQ9NXG0 1405 aa22.03■■□□□ 1.12
VPS26A-201ENST00000263559 MADDQ8WXG6 1647 aa22.02■■□□□ 1.12
VPS26A-201ENST00000263559 STAC3Q96MF2 364 aa22.02■■□□□ 1.11
VPS26A-201ENST00000263559 LAMC1P11047 1609 aa22.01■■□□□ 1.11
VPS26A-201ENST00000263559 ZC3H13Q5T200 1668 aaKnown RBP22.01■■□□□ 1.11
VPS26A-201ENST00000263559 SIGLEC1Q9BZZ2 1709 aa22■■□□□ 1.11
VPS26A-201ENST00000263559 MROH2AA6NES4 1674 aa22■■□□□ 1.11
VPS26A-201ENST00000263559 REREQ9P2R6 1566 aa21.98■■□□□ 1.11
VPS26A-201ENST00000263559 ARID4BQ4LE39 1312 aaPredicted RBP21.97■■□□□ 1.11
VPS26A-201ENST00000263559 ARHGAP31Q2M1Z3 1444 aa21.97■■□□□ 1.11
VPS26A-201ENST00000263559 NOS1P29475 1434 aa21.96■■□□□ 1.11
VPS26A-201ENST00000263559 CCER2I3L3R5 266 aa21.95■■□□□ 1.1
VPS26A-201ENST00000263559 IFT172Q9UG01 1749 aa21.95■■□□□ 1.1
VPS26A-201ENST00000263559 ADGRB3O60242 1522 aa21.95■■□□□ 1.1
VPS26A-201ENST00000263559 POLR3GLQ9BT43 218 aa21.94■■□□□ 1.1
VPS26A-201ENST00000263559 AGLP35573 1532 aa21.94■■□□□ 1.1
VPS26A-201ENST00000263559 CHGAP10645 457 aaKnown RBP21.93■■□□□ 1.1
VPS26A-201ENST00000263559 SYNMO15061 1565 aa21.92■■□□□ 1.1
VPS26A-201ENST00000263559 MYOM2P54296 1465 aa21.92■■□□□ 1.1
VPS26A-201ENST00000263559 PIK3C2BO00750 1634 aa21.91■■□□□ 1.1
VPS26A-201ENST00000263559 ARHGEF40Q8TER5 1519 aa21.91■■□□□ 1.1
VPS26A-201ENST00000263559 ADGRF5Q8IZF2 1346 aa21.9■■□□□ 1.1
VPS26A-201ENST00000263559 KIAA1210Q9ULL0 1709 aa21.89■■□□□ 1.1
VPS26A-201ENST00000263559 IQGAP1P46940 1657 aa21.87■■□□□ 1.09
VPS26A-201ENST00000263559 PREX1Q8TCU6 1659 aa21.87■■□□□ 1.09
VPS26A-201ENST00000263559 PPLO60437 1756 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms