RNA–Protein interactions for RNA: ENST00000263212.9

PPM1F-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PPM1F, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-201ENST00000263212 SOX12O15370 315 aa18.47■□□□□ 0.55
PPM1F-201ENST00000263212 PLIN1O60240 522 aa18.47■□□□□ 0.55
PPM1F-201ENST00000263212 HMMRO75330 724 aa18.47■□□□□ 0.55
PPM1F-201ENST00000263212 DRC7Q8IY82 874 aa18.47■□□□□ 0.55
PPM1F-201ENST00000263212 NGEFQ8N5V2 710 aa18.47■□□□□ 0.55
PPM1F-201ENST00000263212 CHMP4AQ9BY43 222 aa18.47■□□□□ 0.55
PPM1F-201ENST00000263212 SPAG9O60271 1321 aaKnown RBP18.46■□□□□ 0.55
PPM1F-201ENST00000263212 CNTLNQ9NXG0 1405 aa18.45■□□□□ 0.54
PPM1F-201ENST00000263212 DDX11L8A8MPP1 907 aa18.45■□□□□ 0.54
PPM1F-201ENST00000263212 LMOD3Q0VAK6 560 aa18.44■□□□□ 0.54
PPM1F-201ENST00000263212 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.43■□□□□ 0.54
PPM1F-201ENST00000263212 MYOM3Q5VTT5 1437 aa18.43■□□□□ 0.54
PPM1F-201ENST00000263212 KIF7Q2M1P5 1343 aa18.43■□□□□ 0.54
PPM1F-201ENST00000263212 LRRC9Q6ZRR7 1453 aa18.43■□□□□ 0.54
PPM1F-201ENST00000263212 JPH4Q96JJ6 628 aa18.42■□□□□ 0.54
PPM1F-201ENST00000263212 STK31Q9BXU1 1019 aa18.42■□□□□ 0.54
PPM1F-201ENST00000263212 HTATSF1O43719 755 aaKnown RBP18.41■□□□□ 0.54
PPM1F-201ENST00000263212 CUX1P39880 1505 aa18.4■□□□□ 0.54
PPM1F-201ENST00000263212 SLC4A3P48751 1232 aa18.4■□□□□ 0.54
PPM1F-201ENST00000263212 RRBP1Q9P2E9 1410 aaKnown RBP18.4■□□□□ 0.54
PPM1F-201ENST00000263212 ZKSCAN2Q63HK3 967 aa18.4■□□□□ 0.54
PPM1F-201ENST00000263212 FANCD2Q9BXW9 1451 aa18.4■□□□□ 0.54
PPM1F-201ENST00000263212 ST18O60284 1047 aa18.39■□□□□ 0.53
PPM1F-201ENST00000263212 RSPH6AQ9H0K4 717 aa18.38■□□□□ 0.53
PPM1F-201ENST00000263212 TAOK2Q9UL54 1235 aa18.38■□□□□ 0.53
PPM1F-201ENST00000263212 HDAC5Q9UQL6 1122 aa18.38■□□□□ 0.53
PPM1F-201ENST00000263212 RRP7AQ9Y3A4 280 aaKnown RBP18.37■□□□□ 0.53
PPM1F-201ENST00000263212 MLECQ14165 292 aa18.37■□□□□ 0.53
PPM1F-201ENST00000263212 APAF1O14727 1248 aa18.37■□□□□ 0.53
PPM1F-201ENST00000263212 SKOR2Q2VWA4 1001 aaPredicted RBP18.37■□□□□ 0.53
PPM1F-201ENST00000263212 COG6Q9Y2V7 657 aa18.36■□□□□ 0.53
PPM1F-201ENST00000263212 WASHC2AQ641Q2 1341 aa18.36■□□□□ 0.53
PPM1F-201ENST00000263212 CSPP1Q1MSJ5 1256 aa18.36■□□□□ 0.53
PPM1F-201ENST00000263212 TRAK1Q9UPV9 953 aa18.36■□□□□ 0.53
PPM1F-201ENST00000263212 TRIM6-TRIM34B2RNG4 842 aa18.34■□□□□ 0.53
PPM1F-201ENST00000263212 FGD5Q6ZNL6 1462 aa18.34■□□□□ 0.53
PPM1F-201ENST00000263212 ERICH3Q5RHP9 1530 aa18.34■□□□□ 0.53
PPM1F-201ENST00000263212 FOXD4L1Q9NU39 408 aa18.34■□□□□ 0.53
PPM1F-201ENST00000263212 PHF14O94880 888 aa18.33■□□□□ 0.52
PPM1F-201ENST00000263212 BCL2L13Q9BXK5 485 aa18.33■□□□□ 0.52
PPM1F-201ENST00000263212 MIA2Q96PC5 1412 aa18.33■□□□□ 0.52
PPM1F-201ENST00000263212 BRD4O60885 1362 aaPredicted RBP18.32■□□□□ 0.52
PPM1F-201ENST00000263212 CASKIN1Q8WXD9 1431 aa18.32■□□□□ 0.52
PPM1F-201ENST00000263212 GPATCH3Q96I76 525 aa18.32■□□□□ 0.52
PPM1F-201ENST00000263212 WASHC2CQ9Y4E1 1318 aa18.31■□□□□ 0.52
PPM1F-201ENST00000263212 STAC3Q96MF2 364 aa18.3■□□□□ 0.52
PPM1F-201ENST00000263212 DDX19BQ9UMR2 479 aa18.3■□□□□ 0.52
PPM1F-201ENST00000263212 AAMPQ13685 434 aa18.3■□□□□ 0.52
PPM1F-201ENST00000263212 SLC4A10Q6U841 1118 aa18.3■□□□□ 0.52
PPM1F-201ENST00000263212 DDX49Q9Y6V7 483 aaKnown RBP18.3■□□□□ 0.52
PPM1F-201ENST00000263212 ANKRD45Q5TZF3 282 aa18.29■□□□□ 0.52
PPM1F-201ENST00000263212 ARAP1Q96P48 1450 aa18.29■□□□□ 0.52
PPM1F-201ENST00000263212 GNL2Q13823 731 aaKnown RBP18.29■□□□□ 0.52
PPM1F-201ENST00000263212 FYCO1Q9BQS8 1478 aa18.28■□□□□ 0.52
PPM1F-201ENST00000263212 CHMP5Q9NZZ3 219 aa18.28■□□□□ 0.52
PPM1F-201ENST00000263212 EVC2Q86UK5 1308 aa18.28■□□□□ 0.52
PPM1F-201ENST00000263212 GAPVD1Q14C86 1478 aa18.26■□□□□ 0.51
PPM1F-201ENST00000263212 NCOA2Q15596 1464 aa18.26■□□□□ 0.51
PPM1F-201ENST00000263212 DZIP1LQ8IYY4 767 aaKnown RBP18.26■□□□□ 0.51
PPM1F-201ENST00000263212 HSP90AA2PQ14568 343 aaPredicted RBP18.25■□□□□ 0.51
PPM1F-201ENST00000263212 VGFO15240 615 aaPredicted RBP18.25■□□□□ 0.51
PPM1F-201ENST00000263212 PTPRGP23470 1445 aa18.24■□□□□ 0.51
PPM1F-201ENST00000263212 TPM4P67936 248 aa18.24■□□□□ 0.51
PPM1F-201ENST00000263212 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.23■□□□□ 0.51
PPM1F-201ENST00000263212 PAK3O75914 559 aaPredicted RBP18.23■□□□□ 0.51
PPM1F-201ENST00000263212 RUNDC1Q96C34 613 aa18.23■□□□□ 0.51
PPM1F-201ENST00000263212 NUTM2DQ5VT03 806 aaPredicted RBP18.23■□□□□ 0.51
PPM1F-201ENST00000263212 NOL8Q76FK4 1167 aaKnown RBP18.23■□□□□ 0.51
PPM1F-201ENST00000263212 KIF16BQ96L93 1317 aa18.23■□□□□ 0.51
PPM1F-201ENST00000263212 ZNF644Q9H582 1327 aaPredicted RBP18.22■□□□□ 0.51
PPM1F-201ENST00000263212 NFKBIBQ15653 356 aa18.22■□□□□ 0.51
PPM1F-201ENST00000263212 ANKRD50Q9ULJ7 1429 aa18.21■□□□□ 0.51
PPM1F-201ENST00000263212 ATP6V1DQ9Y5K8 247 aa18.21■□□□□ 0.51
PPM1F-201ENST00000263212 ELL2O00472 640 aaPredicted RBP18.21■□□□□ 0.51
PPM1F-201ENST00000263212 REC8O95072 547 aa18.2■□□□□ 0.5
PPM1F-201ENST00000263212 ARID3AQ99856 593 aa18.2■□□□□ 0.5
PPM1F-201ENST00000263212 KIF3AQ9Y496 699 aa18.19■□□□□ 0.5
PPM1F-201ENST00000263212 RAD54L2Q9Y4B4 1467 aa18.19■□□□□ 0.5
PPM1F-201ENST00000263212 API5Q9BZZ5 524 aaKnown RBP18.19■□□□□ 0.5
PPM1F-201ENST00000263212 AMPHP49418 695 aa18.19■□□□□ 0.5
PPM1F-201ENST00000263212 NPHP1O15259 732 aa18.18■□□□□ 0.5
PPM1F-201ENST00000263212 CCDC34Q96HJ3 373 aa18.18■□□□□ 0.5
PPM1F-201ENST00000263212 HSP90B1P14625 803 aaKnown RBP18.18■□□□□ 0.5
PPM1F-201ENST00000263212 PRXQ9BXM0 1461 aa18.18■□□□□ 0.5
PPM1F-201ENST00000263212 DIAPH1O60610 1272 aaKnown RBP18.17■□□□□ 0.5
PPM1F-201ENST00000263212 FOXD4L5Q5VV16 416 aaPredicted RBP18.17■□□□□ 0.5
PPM1F-201ENST00000263212 FOXD4L4Q8WXT5 416 aaPredicted RBP18.17■□□□□ 0.5
PPM1F-201ENST00000263212 SYNJ1O43426 1573 aa18.17■□□□□ 0.5
PPM1F-201ENST00000263212 NGDNQ8NEJ9 315 aaKnown RBP18.16■□□□□ 0.5
PPM1F-201ENST00000263212 NCAPD3P42695 1498 aa18.16■□□□□ 0.5
PPM1F-201ENST00000263212 COG3Q96JB2 828 aa18.16■□□□□ 0.5
PPM1F-201ENST00000263212 ADAMTS8Q9UP79 889 aa18.15■□□□□ 0.5
PPM1F-201ENST00000263212 RILPL2Q969X0 211 aa18.15■□□□□ 0.5
PPM1F-201ENST00000263212 C22orf23Q9BZE7 217 aa18.15■□□□□ 0.5
PPM1F-201ENST00000263212 GORABQ5T7V8 394 aa18.15■□□□□ 0.5
PPM1F-201ENST00000263212 RIPK4P57078 832 aa18.14■□□□□ 0.5
PPM1F-201ENST00000263212 HFM1A2PYH4 1435 aa18.14■□□□□ 0.49
PPM1F-201ENST00000263212 ROCK1Q13464 1354 aa18.13■□□□□ 0.49
PPM1F-201ENST00000263212 NUCB2P80303 420 aa18.13■□□□□ 0.49
PPM1F-201ENST00000263212 CDCA7LQ96GN5 454 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms