RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 ROCK2O75116 1388 aaKnown RBP18.51■□□□□ 0.55
CCDC6-201ENST00000263102 KTN1Q86UP2 1357 aaKnown RBP18.51■□□□□ 0.55
CCDC6-201ENST00000263102 RBM33Q96EV2 1170 aaKnown RBP18.51■□□□□ 0.55
CCDC6-201ENST00000263102 GOLGA3Q08378 1498 aa18.51■□□□□ 0.55
CCDC6-201ENST00000263102 BAZ1BQ9UIG0 1483 aaKnown RBP18.51■□□□□ 0.55
CCDC6-201ENST00000263102 RWDD1Q9H446 243 aaPredicted RBP18.51■□□□□ 0.55
CCDC6-201ENST00000263102 H3BQV1 296 aa18.5■□□□□ 0.55
CCDC6-201ENST00000263102 IFFO2Q5TF58 517 aa18.5■□□□□ 0.55
CCDC6-201ENST00000263102 PCMTD1Q96MG8 357 aaPredicted RBP18.5■□□□□ 0.55
CCDC6-201ENST00000263102 SLKQ9H2G2 1235 aaPredicted RBP18.5■□□□□ 0.55
CCDC6-201ENST00000263102 APPP05067 770 aa18.5■□□□□ 0.55
CCDC6-201ENST00000263102 CCAR1Q8IX12 1150 aaKnown RBP18.5■□□□□ 0.55
CCDC6-201ENST00000263102 CLUAP1Q96AJ1 413 aa18.49■□□□□ 0.55
CCDC6-201ENST00000263102 GBP4Q96PP9 640 aa18.49■□□□□ 0.55
CCDC6-201ENST00000263102 EIF2S2P20042 333 aaKnown RBP18.49■□□□□ 0.55
CCDC6-201ENST00000263102 SYNE3Q6ZMZ3 975 aa18.49■□□□□ 0.55
CCDC6-201ENST00000263102 FYB1O15117 783 aa18.48■□□□□ 0.55
CCDC6-201ENST00000263102 TPM2P07951 284 aa18.48■□□□□ 0.55
CCDC6-201ENST00000263102 KIF16BQ96L93 1317 aa18.48■□□□□ 0.55
CCDC6-201ENST00000263102 SYAP1Q96A49 352 aaPredicted RBP18.48■□□□□ 0.55
CCDC6-201ENST00000263102 SF3B2Q13435 895 aaKnown RBP18.48■□□□□ 0.55
CCDC6-201ENST00000263102 RILPL2Q969X0 211 aa18.48■□□□□ 0.55
CCDC6-201ENST00000263102 SLC4A3P48751 1232 aa18.47■□□□□ 0.55
CCDC6-201ENST00000263102 NECTIN2Q92692 538 aa18.47■□□□□ 0.55
CCDC6-201ENST00000263102 PAF1Q8N7H5 531 aa18.47■□□□□ 0.55
CCDC6-201ENST00000263102 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.46■□□□□ 0.55
CCDC6-201ENST00000263102 TSR1Q2NL82 804 aaKnown RBP18.46■□□□□ 0.55
CCDC6-201ENST00000263102 MTMR7Q9Y216 660 aa18.45■□□□□ 0.54
CCDC6-201ENST00000263102 EFCAB2Q5VUJ9 269 aa18.45■□□□□ 0.54
CCDC6-201ENST00000263102 ELL2O00472 640 aaPredicted RBP18.45■□□□□ 0.54
CCDC6-201ENST00000263102 FAM184AQ8NB25 1140 aa18.44■□□□□ 0.54
CCDC6-201ENST00000263102 MCTP1Q6DN14 999 aa18.44■□□□□ 0.54
CCDC6-201ENST00000263102 CYB5RLQ6IPT4 315 aa18.44■□□□□ 0.54
CCDC6-201ENST00000263102 CCAR2Q8N163 923 aaKnown RBP18.44■□□□□ 0.54
CCDC6-201ENST00000263102 TMEM132AQ24JP5 1023 aa18.44■□□□□ 0.54
CCDC6-201ENST00000263102 TRAK1Q9UPV9 953 aa18.43■□□□□ 0.54
CCDC6-201ENST00000263102 TEFQ10587 303 aa18.43■□□□□ 0.54
CCDC6-201ENST00000263102 FOXD4L6Q3SYB3 417 aaPredicted RBP18.43■□□□□ 0.54
CCDC6-201ENST00000263102 FOXD4L3Q6VB84 417 aaPredicted RBP18.43■□□□□ 0.54
CCDC6-201ENST00000263102 CSPP1Q1MSJ5 1256 aa18.42■□□□□ 0.54
CCDC6-201ENST00000263102 CEP162Q5TB80 1403 aa18.42■□□□□ 0.54
CCDC6-201ENST00000263102 PSME1Q06323 249 aa18.42■□□□□ 0.54
CCDC6-201ENST00000263102 R3HCC1Q9Y3T6 440 aaKnown RBP18.42■□□□□ 0.54
CCDC6-201ENST00000263102 EIF3AQ14152 1382 aaKnown RBP18.42■□□□□ 0.54
CCDC6-201ENST00000263102 TNNT3P45378 269 aaPredicted RBP18.41■□□□□ 0.54
CCDC6-201ENST00000263102 HSPA5P11021 654 aaKnown RBP18.4■□□□□ 0.54
CCDC6-201ENST00000263102 LMOD3Q0VAK6 560 aa18.4■□□□□ 0.54
CCDC6-201ENST00000263102 IKQ13123 557 aaPredicted RBP18.4■□□□□ 0.54
CCDC6-201ENST00000263102 RRP7AQ9Y3A4 280 aaKnown RBP18.4■□□□□ 0.54
CCDC6-201ENST00000263102 HNRNPMP52272 730 aaKnown RBP eCLIP18.4■□□□□ 0.549e-6■■■■□ 22.2
CCDC6-201ENST00000263102 FAM177BA6PVY3 158 aa18.39■□□□□ 0.53
CCDC6-201ENST00000263102 KIF3AQ9Y496 699 aa18.38■□□□□ 0.53
CCDC6-201ENST00000263102 CARMIL2Q6F5E8 1435 aa18.38■□□□□ 0.53
CCDC6-201ENST00000263102 NEXNQ0ZGT2 675 aa18.38■□□□□ 0.53
CCDC6-201ENST00000263102 CCDC27Q2M243 656 aa18.38■□□□□ 0.53
CCDC6-201ENST00000263102 TRIM29Q14134 588 aa18.38■□□□□ 0.53
CCDC6-201ENST00000263102 WRNQ14191 1432 aaPredicted RBP eCLIP18.37■□□□□ 0.53
CCDC6-201ENST00000263102 NFXL1Q6ZNB6 911 aa18.37■□□□□ 0.53
CCDC6-201ENST00000263102 COG3Q96JB2 828 aa18.37■□□□□ 0.53
CCDC6-201ENST00000263102 NUP155O75694 1391 aa18.36■□□□□ 0.53
CCDC6-201ENST00000263102 C9orf78Q9NZ63 289 aaPredicted RBP18.36■□□□□ 0.53
CCDC6-201ENST00000263102 USP35Q9P2H5 1018 aa18.36■□□□□ 0.53
CCDC6-201ENST00000263102 ATF3P18847 181 aa18.35■□□□□ 0.53
CCDC6-201ENST00000263102 PMFBP1Q8TBY8 1022 aa18.35■□□□□ 0.53
CCDC6-201ENST00000263102 FOSBP53539 338 aa18.35■□□□□ 0.53
CCDC6-201ENST00000263102 RB1CC1Q8TDY2 1594 aa18.35■□□□□ 0.53
CCDC6-201ENST00000263102 CT47A1Q5JQC4 288 aaPredicted RBP18.35■□□□□ 0.53
CCDC6-201ENST00000263102 PTMSP20962 102 aa18.34■□□□□ 0.53
CCDC6-201ENST00000263102 IBSPP21815 317 aaPredicted RBP18.34■□□□□ 0.53
CCDC6-201ENST00000263102 KDM4AO75164 1064 aa18.34■□□□□ 0.53
CCDC6-201ENST00000263102 NUTM2BA6NNL0 878 aaPredicted RBP18.34■□□□□ 0.53
CCDC6-201ENST00000263102 NUTM2EB1AL46 878 aaPredicted RBP18.34■□□□□ 0.53
CCDC6-201ENST00000263102 ODF2Q5BJF6 829 aa18.34■□□□□ 0.53
CCDC6-201ENST00000263102 NUTM2AQ8IVF1 878 aaPredicted RBP18.34■□□□□ 0.53
CCDC6-201ENST00000263102 ZFYVE27Q5T4F4 411 aa18.34■□□□□ 0.53
CCDC6-201ENST00000263102 PLIN1O60240 522 aa18.33■□□□□ 0.53
CCDC6-201ENST00000263102 CCDC47Q96A33 483 aaKnown RBP18.33■□□□□ 0.53
CCDC6-201ENST00000263102 TPM1P09493 284 aa18.33■□□□□ 0.52
CCDC6-201ENST00000263102 VSIG10Q8N0Z9 540 aa18.33■□□□□ 0.52
CCDC6-201ENST00000263102 EEA1Q15075 1411 aa18.33■□□□□ 0.52
CCDC6-201ENST00000263102 WWC2Q6AWC2 1192 aa18.33■□□□□ 0.52
CCDC6-201ENST00000263102 ERICH2A1L162 156 aa18.31■□□□□ 0.52
CCDC6-201ENST00000263102 RCAN3Q9UKA8 241 aa18.31■□□□□ 0.52
CCDC6-201ENST00000263102 DIAPH3Q9NSV4 1193 aa18.3■□□□□ 0.52
CCDC6-201ENST00000263102 NUTM2GQ5VZR2 741 aa18.29■□□□□ 0.52
CCDC6-201ENST00000263102 MINK1Q8N4C8 1332 aaPredicted RBP18.29■□□□□ 0.52
CCDC6-201ENST00000263102 ST18O60284 1047 aa18.29■□□□□ 0.52
CCDC6-201ENST00000263102 TCERG1O14776 1098 aaKnown RBP18.29■□□□□ 0.52
CCDC6-201ENST00000263102 CPLX1O14810 134 aa18.28■□□□□ 0.52
CCDC6-201ENST00000263102 LRRFIP1Q32MZ4 808 aaKnown RBP18.28■□□□□ 0.52
CCDC6-201ENST00000263102 CUX2O14529 1486 aa18.28■□□□□ 0.52
CCDC6-201ENST00000263102 ANO2Q9NQ90 1003 aa18.28■□□□□ 0.52
CCDC6-201ENST00000263102 NAP1L1P55209 391 aaKnown RBP18.28■□□□□ 0.52
CCDC6-201ENST00000263102 PIP4K2BP78356 416 aa18.27■□□□□ 0.51
CCDC6-201ENST00000263102 CENPJQ9HC77 1338 aaPredicted RBP18.27■□□□□ 0.51
CCDC6-201ENST00000263102 CPLX2Q6PUV4 134 aaKnown RBP18.26■□□□□ 0.51
CCDC6-201ENST00000263102 IFIT2P09913 472 aaKnown RBP18.26■□□□□ 0.51
CCDC6-201ENST00000263102 AIMP1Q12904 312 aaKnown RBP18.26■□□□□ 0.51
CCDC6-201ENST00000263102 CARMIL1Q5VZK9 1371 aa18.26■□□□□ 0.51
CCDC6-201ENST00000263102 GOLGA6L19H0YKK7 550 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms