RNA–Protein interactions for RNA: ENST00000262717.8

CDH20-201, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDH20, Length 3,882 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-201ENST00000262717 PZPP20742 1482 aa19.43■□□□□ 0.7
CDH20-201ENST00000262717 SPAG9O60271 1321 aaKnown RBP19.43■□□□□ 0.7
CDH20-201ENST00000262717 NUTM2DQ5VT03 806 aaPredicted RBP19.43■□□□□ 0.7
CDH20-201ENST00000262717 ERICH6BQ5W0A0 696 aa19.43■□□□□ 0.7
CDH20-201ENST00000262717 ATP10BO94823 1461 aa19.42■□□□□ 0.7
CDH20-201ENST00000262717 EIF4G3O43432 1585 aaKnown RBP19.41■□□□□ 0.7
CDH20-201ENST00000262717 TEX14Q8IWB6 1497 aa19.41■□□□□ 0.7
CDH20-201ENST00000262717 GGT6Q6P531 493 aa19.4■□□□□ 0.7
CDH20-201ENST00000262717 KIF14Q15058 1648 aa19.4■□□□□ 0.7
CDH20-201ENST00000262717 BCL11AQ9H165 835 aa19.4■□□□□ 0.7
CDH20-201ENST00000262717 NPM1P06748 294 aaKnown RBP eCLIP19.4■□□□□ 0.7
CDH20-201ENST00000262717 SAFB2Q14151 953 aaKnown RBP eCLIP19.4■□□□□ 0.7
CDH20-201ENST00000262717 RSPH4AQ5TD94 716 aa19.4■□□□□ 0.7
CDH20-201ENST00000262717 ARHGAP5Q13017 1502 aa19.39■□□□□ 0.7
CDH20-201ENST00000262717 NOP58Q9Y2X3 529 aaKnown RBP19.38■□□□□ 0.69
CDH20-201ENST00000262717 KDM5BQ9UGL1 1544 aa19.37■□□□□ 0.69
CDH20-201ENST00000262717 LAS1LQ9Y4W2 734 aaKnown RBP19.37■□□□□ 0.69
CDH20-201ENST00000262717 SKAP1Q86WV1 359 aa19.36■□□□□ 0.69
CDH20-201ENST00000262717 RRP1P56182 461 aaKnown RBP19.36■□□□□ 0.69
CDH20-201ENST00000262717 DNMT1P26358 1616 aaKnown RBP19.36■□□□□ 0.69
CDH20-201ENST00000262717 RGS3P49796 1198 aa19.34■□□□□ 0.69
CDH20-201ENST00000262717 GCC2Q8IWJ2 1684 aa19.34■□□□□ 0.69
CDH20-201ENST00000262717 DHX29Q7Z478 1369 aaKnown RBP19.32■□□□□ 0.68
CDH20-201ENST00000262717 CEP170Q5SW79 1584 aa19.31■□□□□ 0.68
CDH20-201ENST00000262717 ADAMTS8Q9UP79 889 aa19.31■□□□□ 0.68
CDH20-201ENST00000262717 SPATA31E1Q6ZUB1 1445 aa19.3■□□□□ 0.68
CDH20-201ENST00000262717 FANCIQ9NVI1 1328 aa19.29■□□□□ 0.68
CDH20-201ENST00000262717 CRBNQ96SW2 442 aa19.29■□□□□ 0.68
CDH20-201ENST00000262717 PLEKHH2Q8IVE3 1493 aa19.29■□□□□ 0.68
CDH20-201ENST00000262717 ARID4BQ4LE39 1312 aaPredicted RBP19.29■□□□□ 0.68
CDH20-201ENST00000262717 TRAK1Q9UPV9 953 aa19.28■□□□□ 0.68
CDH20-201ENST00000262717 PAK3O75914 559 aaPredicted RBP19.28■□□□□ 0.68
CDH20-201ENST00000262717 CDCA8Q53HL2 280 aa19.28■□□□□ 0.68
CDH20-201ENST00000262717 FRAT1Q92837 279 aaPredicted RBP19.27■□□□□ 0.68
CDH20-201ENST00000262717 CCDC141Q6ZP82 1450 aa19.27■□□□□ 0.68
CDH20-201ENST00000262717 CFAP70Q5T0N1 1121 aa19.26■□□□□ 0.67
CDH20-201ENST00000262717 BRD4O60885 1362 aaPredicted RBP19.26■□□□□ 0.67
CDH20-201ENST00000262717 SMG6Q86US8 1419 aaKnown RBP19.26■□□□□ 0.67
CDH20-201ENST00000262717 DISP3Q9P2K9 1392 aa19.25■□□□□ 0.67
CDH20-201ENST00000262717 STK26Q9P289 416 aa19.25■□□□□ 0.67
CDH20-201ENST00000262717 RRP7AQ9Y3A4 280 aaKnown RBP19.25■□□□□ 0.67
CDH20-201ENST00000262717 KANK1Q14678 1352 aa19.23■□□□□ 0.67
CDH20-201ENST00000262717 APAF1O14727 1248 aa19.22■□□□□ 0.67
CDH20-201ENST00000262717 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.22■□□□□ 0.67
CDH20-201ENST00000262717 STAG3Q9UJ98 1225 aa19.22■□□□□ 0.67
CDH20-201ENST00000262717 TMEM132EQ6IEE7 984 aa19.2■□□□□ 0.66
CDH20-201ENST00000262717 PLPPR3Q6T4P5 718 aa19.2■□□□□ 0.66
CDH20-201ENST00000262717 DEKP35659 375 aaKnown RBP19.19■□□□□ 0.66
CDH20-201ENST00000262717 NUP160Q12769 1436 aa19.19■□□□□ 0.66
CDH20-201ENST00000262717 SYCP2Q9BX26 1530 aa19.19■□□□□ 0.66
CDH20-201ENST00000262717 ITSN2Q9NZM3 1697 aa19.19■□□□□ 0.66
CDH20-201ENST00000262717 GOLGA2Q08379 1002 aa19.18■□□□□ 0.66
CDH20-201ENST00000262717 MORC1Q86VD1 984 aa19.18■□□□□ 0.66
CDH20-201ENST00000262717 IPO9Q96P70 1041 aaKnown RBP19.18■□□□□ 0.66
CDH20-201ENST00000262717 SLC4A3P48751 1232 aa19.18■□□□□ 0.66
CDH20-201ENST00000262717 PPM1GO15355 546 aaPredicted RBP19.17■□□□□ 0.66
CDH20-201ENST00000262717 PDE4AP27815 886 aa19.17■□□□□ 0.66
CDH20-201ENST00000262717 PPP2R1AP30153 589 aa19.17■□□□□ 0.66
CDH20-201ENST00000262717 PDE3BQ13370 1112 aa19.17■□□□□ 0.66
CDH20-201ENST00000262717 C20orf194Q5TEA3 1177 aa19.17■□□□□ 0.66
CDH20-201ENST00000262717 ERBINQ96RT1 1412 aa19.17■□□□□ 0.66
CDH20-201ENST00000262717 RALGAPBQ86X10 1494 aa19.17■□□□□ 0.66
CDH20-201ENST00000262717 BCL2L13Q9BXK5 485 aa19.15■□□□□ 0.66
CDH20-201ENST00000262717 SCAPERQ9BY12 1400 aa19.15■□□□□ 0.66
CDH20-201ENST00000262717 FAM135AQ9P2D6 1515 aa19.14■□□□□ 0.66
CDH20-201ENST00000262717 TESK2Q96S53 571 aa19.14■□□□□ 0.66
CDH20-201ENST00000262717 U2SURPO15042 1029 aaKnown RBP19.14■□□□□ 0.65
CDH20-201ENST00000262717 ADGRL2O95490 1459 aa19.13■□□□□ 0.65
CDH20-201ENST00000262717 NEFMP07197 916 aa19.13■□□□□ 0.65
CDH20-201ENST00000262717 TCERG1O14776 1098 aaKnown RBP19.12■□□□□ 0.65
CDH20-201ENST00000262717 PRAG1Q86YV5 1406 aa19.12■□□□□ 0.65
CDH20-201ENST00000262717 CLUAP1Q96AJ1 413 aa19.12■□□□□ 0.65
CDH20-201ENST00000262717 PER1O15534 1290 aaPredicted RBP19.11■□□□□ 0.65
CDH20-201ENST00000262717 WASHC2CQ9Y4E1 1318 aa19.1■□□□□ 0.65
CDH20-201ENST00000262717 ABCC10Q5T3U5 1492 aa19.1■□□□□ 0.65
CDH20-201ENST00000262717 SRPK2P78362 688 aaKnown RBP19.09■□□□□ 0.65
CDH20-201ENST00000262717 BCORL1Q5H9F3 1711 aa19.09■□□□□ 0.65
CDH20-201ENST00000262717 MLECQ14165 292 aa19.09■□□□□ 0.65
CDH20-201ENST00000262717 TRAPPC8Q9Y2L5 1435 aa19.08■□□□□ 0.65
CDH20-201ENST00000262717 SLC12A5Q9H2X9 1139 aa19.07■□□□□ 0.64
CDH20-201ENST00000262717 MBD5Q9P267 1494 aa19.07■□□□□ 0.64
CDH20-201ENST00000262717 U2AF1L5P0DN76 240 aaPredicted RBP19.07■□□□□ 0.64
CDH20-201ENST00000262717 U2AF1Q01081 240 aaKnown RBP eCLIP19.07■□□□□ 0.64
CDH20-201ENST00000262717 ADGRF5Q8IZF2 1346 aa19.06■□□□□ 0.64
CDH20-201ENST00000262717 BCAR3O75815 825 aa19.06■□□□□ 0.64
CDH20-201ENST00000262717 ARXQ96QS3 562 aa19.05■□□□□ 0.64
CDH20-201ENST00000262717 POGKQ9P215 609 aa19.05■□□□□ 0.64
CDH20-201ENST00000262717 UHRF1BP1Q6BDS2 1440 aa19.04■□□□□ 0.64
CDH20-201ENST00000262717 A2MP01023 1474 aa19.04■□□□□ 0.64
CDH20-201ENST00000262717 EIF3AQ14152 1382 aaKnown RBP19.04■□□□□ 0.64
CDH20-201ENST00000262717 COG6Q9Y2V7 657 aa19.04■□□□□ 0.64
CDH20-201ENST00000262717 CFAP53Q96M91 514 aa19.03■□□□□ 0.64
CDH20-201ENST00000262717 RTN4Q9NQC3 1192 aaKnown RBP19.03■□□□□ 0.64
CDH20-201ENST00000262717 SHANK2Q9UPX8 1470 aa19.02■□□□□ 0.63
CDH20-201ENST00000262717 PARD3Q8TEW0 1356 aa19.01■□□□□ 0.63
CDH20-201ENST00000262717 ABCA8O94911 1581 aa19.01■□□□□ 0.63
CDH20-201ENST00000262717 KDM5CP41229 1560 aa19.01■□□□□ 0.63
CDH20-201ENST00000262717 ADGBQ8N7X0 1667 aa19.01■□□□□ 0.63
CDH20-201ENST00000262717 RAPGEF3O95398 923 aa19.01■□□□□ 0.63
CDH20-201ENST00000262717 PANK1Q8TE04 598 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms