RNA–Protein interactions for RNA: ENST00000262544.6

SEC23B-201, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEC23B, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-201ENST00000262544 SMG6Q86US8 1419 aaKnown RBP17.24■□□□□ 0.35
SEC23B-201ENST00000262544 RRP1P56182 461 aaKnown RBP17.23■□□□□ 0.35
SEC23B-201ENST00000262544 CCDC144AA2RUR9 1427 aa17.22■□□□□ 0.35
SEC23B-201ENST00000262544 NLRP13Q86W25 1043 aa17.21■□□□□ 0.35
SEC23B-201ENST00000262544 KTN1Q86UP2 1357 aaKnown RBP17.21■□□□□ 0.35
SEC23B-201ENST00000262544 PTPRGP23470 1445 aa17.21■□□□□ 0.35
SEC23B-201ENST00000262544 NUP160Q12769 1436 aa17.2■□□□□ 0.34
SEC23B-201ENST00000262544 RALBP1Q15311 655 aa17.2■□□□□ 0.34
SEC23B-201ENST00000262544 ATP10BO94823 1461 aa17.2■□□□□ 0.34
SEC23B-201ENST00000262544 RTL5Q5HYW3 569 aaPredicted RBP17.19■□□□□ 0.34
SEC23B-201ENST00000262544 CEP170Q5SW79 1584 aa17.19■□□□□ 0.34
SEC23B-201ENST00000262544 CCDC146Q8IYE0 955 aa17.18■□□□□ 0.34
SEC23B-201ENST00000262544 PRKCSHP14314 528 aaPredicted RBP17.16■□□□□ 0.34
SEC23B-201ENST00000262544 TNNT2P45379 298 aaPredicted RBP17.16■□□□□ 0.34
SEC23B-201ENST00000262544 CHGAP10645 457 aaKnown RBP17.16■□□□□ 0.34
SEC23B-201ENST00000262544 C20orf194Q5TEA3 1177 aa17.15■□□□□ 0.34
SEC23B-201ENST00000262544 DISP3Q9P2K9 1392 aa17.15■□□□□ 0.34
SEC23B-201ENST00000262544 IPO9Q96P70 1041 aaKnown RBP17.15■□□□□ 0.34
SEC23B-201ENST00000262544 CRBNQ96SW2 442 aa17.15■□□□□ 0.34
SEC23B-201ENST00000262544 ADAMTS8Q9UP79 889 aa17.15■□□□□ 0.34
SEC23B-201ENST00000262544 WDR43Q15061 677 aaKnown RBP eCLIP17.14■□□□□ 0.33
SEC23B-201ENST00000262544 SLC4A3P48751 1232 aa17.14■□□□□ 0.33
SEC23B-201ENST00000262544 TMF1P82094 1093 aa17.14■□□□□ 0.33
SEC23B-201ENST00000262544 KNSTRNQ9Y448 316 aa17.14■□□□□ 0.33
SEC23B-201ENST00000262544 NEUROD2Q15784 382 aa17.12■□□□□ 0.33
SEC23B-201ENST00000262544 AFAP1Q8N556 730 aa17.12■□□□□ 0.33
SEC23B-201ENST00000262544 MBD5Q9P267 1494 aa17.11■□□□□ 0.33
SEC23B-201ENST00000262544 KDM5CP41229 1560 aa17.11■□□□□ 0.33
SEC23B-201ENST00000262544 BRD4O60885 1362 aaPredicted RBP17.11■□□□□ 0.33
SEC23B-201ENST00000262544 RGS3P49796 1198 aa17.1■□□□□ 0.33
SEC23B-201ENST00000262544 RALGAPBQ86X10 1494 aa17.1■□□□□ 0.33
SEC23B-201ENST00000262544 PDE4AP27815 886 aa17.1■□□□□ 0.33
SEC23B-201ENST00000262544 ARID4BQ4LE39 1312 aaPredicted RBP17.09■□□□□ 0.33
SEC23B-201ENST00000262544 PER1O15534 1290 aaPredicted RBP17.09■□□□□ 0.33
SEC23B-201ENST00000262544 ITSN2Q9NZM3 1697 aa17.08■□□□□ 0.32
SEC23B-201ENST00000262544 PLEKHH2Q8IVE3 1493 aa17.08■□□□□ 0.32
SEC23B-201ENST00000262544 ARHGAP5Q13017 1502 aa17.08■□□□□ 0.32
SEC23B-201ENST00000262544 TESK2Q96S53 571 aa17.07■□□□□ 0.32
SEC23B-201ENST00000262544 RTN4Q9NQC3 1192 aaKnown RBP17.07■□□□□ 0.32
SEC23B-201ENST00000262544 ADGRL2O95490 1459 aa17.06■□□□□ 0.32
SEC23B-201ENST00000262544 RNF123Q5XPI4 1314 aa17.05■□□□□ 0.32
SEC23B-201ENST00000262544 FAM135AQ9P2D6 1515 aa17.04■□□□□ 0.32
SEC23B-201ENST00000262544 NEFMP07197 916 aa17.04■□□□□ 0.32
SEC23B-201ENST00000262544 NUTM2DQ5VT03 806 aaPredicted RBP17.03■□□□□ 0.32
SEC23B-201ENST00000262544 ADGBQ8N7X0 1667 aa17.03■□□□□ 0.32
SEC23B-201ENST00000262544 SYCP2Q9BX26 1530 aa17.03■□□□□ 0.32
SEC23B-201ENST00000262544 LRPPRCP42704 1394 aaKnown RBP17.03■□□□□ 0.32
SEC23B-201ENST00000262544 CDC42BPAQ5VT25 1732 aa17.03■□□□□ 0.32
SEC23B-201ENST00000262544 PRAG1Q86YV5 1406 aa17.03■□□□□ 0.32
SEC23B-201ENST00000262544 ABCC10Q5T3U5 1492 aa17.02■□□□□ 0.32
SEC23B-201ENST00000262544 CCDC141Q6ZP82 1450 aa17.02■□□□□ 0.32
SEC23B-201ENST00000262544 UHRF1BP1Q6BDS2 1440 aa17.02■□□□□ 0.31
SEC23B-201ENST00000262544 CHD1O14646 1710 aa17.02■□□□□ 0.31
SEC23B-201ENST00000262544 DAXXQ9UER7 740 aaPredicted RBP17.01■□□□□ 0.31
SEC23B-201ENST00000262544 KIF3BO15066 747 aa17.01■□□□□ 0.31
SEC23B-201ENST00000262544 SHROOM2Q13796 1616 aa17■□□□□ 0.31
SEC23B-201ENST00000262544 APAF1O14727 1248 aa17■□□□□ 0.31
SEC23B-201ENST00000262544 ERBINQ96RT1 1412 aa17■□□□□ 0.31
SEC23B-201ENST00000262544 PARD3Q8TEW0 1356 aa16.99■□□□□ 0.31
SEC23B-201ENST00000262544 CANXP27824 592 aaKnown RBP16.99■□□□□ 0.31
SEC23B-201ENST00000262544 PPP2R1AP30153 589 aa16.99■□□□□ 0.31
SEC23B-201ENST00000262544 RRP7AQ9Y3A4 280 aaKnown RBP16.99■□□□□ 0.31
SEC23B-201ENST00000262544 TCERG1O14776 1098 aaKnown RBP16.99■□□□□ 0.31
SEC23B-201ENST00000262544 CFAP70Q5T0N1 1121 aa16.98■□□□□ 0.31
SEC23B-201ENST00000262544 EFCAB2Q5VUJ9 269 aa16.98■□□□□ 0.31
SEC23B-201ENST00000262544 A2MP01023 1474 aa16.98■□□□□ 0.31
SEC23B-201ENST00000262544 SPAG9O60271 1321 aaKnown RBP16.97■□□□□ 0.31
SEC23B-201ENST00000262544 SAFB2Q14151 953 aaKnown RBP eCLIP16.97■□□□□ 0.31
SEC23B-201ENST00000262544 RSPH4AQ5TD94 716 aa16.97■□□□□ 0.31
SEC23B-201ENST00000262544 PLA2R1Q13018 1463 aa16.97■□□□□ 0.31
SEC23B-201ENST00000262544 PDE3BQ13370 1112 aa16.97■□□□□ 0.31
SEC23B-201ENST00000262544 FRAT1Q92837 279 aaPredicted RBP16.97■□□□□ 0.31
SEC23B-201ENST00000262544 BACH2Q9BYV9 841 aa16.96■□□□□ 0.31
SEC23B-201ENST00000262544 BCAR3O75815 825 aa16.95■□□□□ 0.3
SEC23B-201ENST00000262544 GOLGA2Q08379 1002 aa16.94■□□□□ 0.3
SEC23B-201ENST00000262544 BCL2L13Q9BXK5 485 aa16.94■□□□□ 0.3
SEC23B-201ENST00000262544 POLR1AO95602 1720 aaPredicted RBP16.94■□□□□ 0.3
SEC23B-201ENST00000262544 SPINK5Q9NQ38 1064 aaPredicted RBP16.94■□□□□ 0.3
SEC23B-201ENST00000262544 CROCC2H7BZ55 1655 aa16.94■□□□□ 0.3
SEC23B-201ENST00000262544 ABCA8O94911 1581 aa16.94■□□□□ 0.3
SEC23B-201ENST00000262544 ANO8Q9HCE9 1232 aaPredicted RBP16.93■□□□□ 0.3
SEC23B-201ENST00000262544 SAMD9LQ8IVG5 1584 aa16.93■□□□□ 0.3
SEC23B-201ENST00000262544 TRAK1Q9UPV9 953 aa16.93■□□□□ 0.3
SEC23B-201ENST00000262544 PLEKHH1Q9ULM0 1364 aa16.92■□□□□ 0.3
SEC23B-201ENST00000262544 ARHGEF12Q9NZN5 1544 aa16.92■□□□□ 0.3
SEC23B-201ENST00000262544 GGT6Q6P531 493 aa16.91■□□□□ 0.3
SEC23B-201ENST00000262544 SHANK2Q9UPX8 1470 aa16.9■□□□□ 0.3
SEC23B-201ENST00000262544 KDM5DQ9BY66 1539 aa16.9■□□□□ 0.3
SEC23B-201ENST00000262544 ADCY10Q96PN6 1610 aa16.9■□□□□ 0.3
SEC23B-201ENST00000262544 TMEM132EQ6IEE7 984 aa16.9■□□□□ 0.3
SEC23B-201ENST00000262544 DMRT2Q9Y5R5 561 aa16.9■□□□□ 0.3
SEC23B-201ENST00000262544 DUSP27Q5VZP5 1158 aa16.89■□□□□ 0.29
SEC23B-201ENST00000262544 CLUAP1Q96AJ1 413 aa16.89■□□□□ 0.29
SEC23B-201ENST00000262544 CLASP1Q7Z460 1538 aa16.88■□□□□ 0.29
SEC23B-201ENST00000262544 TRAPPC8Q9Y2L5 1435 aa16.88■□□□□ 0.29
SEC23B-201ENST00000262544 AMER1Q5JTC6 1135 aaPredicted RBP16.88■□□□□ 0.29
SEC23B-201ENST00000262544 ERCC6L2Q5T890 1561 aa16.88■□□□□ 0.29
SEC23B-201ENST00000262544 TTC37Q6PGP7 1564 aa16.87■□□□□ 0.29
SEC23B-201ENST00000262544 IL27Q8NEV9 243 aa16.87■□□□□ 0.29
SEC23B-201ENST00000262544 COG6Q9Y2V7 657 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms