RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 GOLGA6L4A6NEF3 574 aa10.4□□□□□ -0.74
SNCAIP-201ENST00000261367 AMER1Q5JTC6 1135 aaPredicted RBP10.4□□□□□ -0.74
SNCAIP-201ENST00000261367 KIF16BQ96L93 1317 aa10.4□□□□□ -0.74
SNCAIP-201ENST00000261367 FYCO1Q9BQS8 1478 aa10.4□□□□□ -0.74
SNCAIP-201ENST00000261367 PDE4CQ08493 712 aa10.4□□□□□ -0.75
SNCAIP-201ENST00000261367 RRP1P56182 461 aaKnown RBP10.39□□□□□ -0.75
SNCAIP-201ENST00000261367 BRPF3Q9ULD4 1205 aa10.39□□□□□ -0.75
SNCAIP-201ENST00000261367 HSPA5P11021 654 aaKnown RBP10.39□□□□□ -0.75
SNCAIP-201ENST00000261367 GRIN2BQ13224 1484 aa10.39□□□□□ -0.75
SNCAIP-201ENST00000261367 CASKIN1Q8WXD9 1431 aa10.39□□□□□ -0.75
SNCAIP-201ENST00000261367 ARHGEF11O15085 1522 aa10.38□□□□□ -0.75
SNCAIP-201ENST00000261367 TPM4P67936 248 aa10.38□□□□□ -0.75
SNCAIP-201ENST00000261367 ZMYND15Q9H091 742 aa10.38□□□□□ -0.75
SNCAIP-201ENST00000261367 TDRD9Q8NDG6 1382 aaKnown RBP10.38□□□□□ -0.75
SNCAIP-201ENST00000261367 NGEFQ8N5V2 710 aa10.37□□□□□ -0.75
SNCAIP-201ENST00000261367 GAPVD1Q14C86 1478 aa10.37□□□□□ -0.75
SNCAIP-201ENST00000261367 PDCL2Q8N4E4 241 aa10.37□□□□□ -0.75
SNCAIP-201ENST00000261367 ADAMTS12P58397 1594 aa10.36□□□□□ -0.75
SNCAIP-201ENST00000261367 PTPRKQ15262 1439 aa10.36□□□□□ -0.75
SNCAIP-201ENST00000261367 RAB3GAP2Q9H2M9 1393 aa10.36□□□□□ -0.75
SNCAIP-201ENST00000261367 HAP1P54257 671 aaPredicted RBP10.36□□□□□ -0.75
SNCAIP-201ENST00000261367 CARD11Q9BXL7 1154 aa10.35□□□□□ -0.75
SNCAIP-201ENST00000261367 IPO8O15397 1037 aaKnown RBP10.35□□□□□ -0.75
SNCAIP-201ENST00000261367 KIF3AQ9Y496 699 aa10.35□□□□□ -0.75
SNCAIP-201ENST00000261367 ARGLU1Q9NWB6 273 aaPredicted RBP10.34□□□□□ -0.75
SNCAIP-201ENST00000261367 DDX49Q9Y6V7 483 aaKnown RBP10.34□□□□□ -0.75
SNCAIP-201ENST00000261367 ESF1Q9H501 851 aaKnown RBP10.34□□□□□ -0.75
SNCAIP-201ENST00000261367 CGNL1Q0VF96 1302 aa10.34□□□□□ -0.75
SNCAIP-201ENST00000261367 KIF15Q9NS87 1388 aa10.33□□□□□ -0.76
SNCAIP-201ENST00000261367 MSH5O43196 834 aa10.33□□□□□ -0.76
SNCAIP-201ENST00000261367 ARID3AQ99856 593 aa10.33□□□□□ -0.76
SNCAIP-201ENST00000261367 NPM1P06748 294 aaKnown RBP eCLIP10.32□□□□□ -0.76
SNCAIP-201ENST00000261367 CAVIN1Q6NZI2 390 aaKnown RBP10.32□□□□□ -0.76
SNCAIP-201ENST00000261367 KDM5BQ9UGL1 1544 aa10.32□□□□□ -0.76
SNCAIP-201ENST00000261367 ESPNB1AK53 854 aa10.32□□□□□ -0.76
SNCAIP-201ENST00000261367 ST18O60284 1047 aa10.32□□□□□ -0.76
SNCAIP-201ENST00000261367 NLRP13Q86W25 1043 aa10.32□□□□□ -0.76
SNCAIP-201ENST00000261367 DENND4BO75064 1496 aaPredicted RBP10.32□□□□□ -0.76
SNCAIP-201ENST00000261367 NUCB2P80303 420 aa10.32□□□□□ -0.76
SNCAIP-201ENST00000261367 ATP6V1DQ9Y5K8 247 aa10.32□□□□□ -0.76
SNCAIP-201ENST00000261367 PDS5BQ9NTI5 1447 aa10.32□□□□□ -0.76
SNCAIP-201ENST00000261367 NASPP49321 788 aaPredicted RBP10.32□□□□□ -0.76
SNCAIP-201ENST00000261367 WDR62O43379 1518 aa10.31□□□□□ -0.76
SNCAIP-201ENST00000261367 R3HCC1Q9Y3T6 440 aaKnown RBP10.31□□□□□ -0.76
SNCAIP-201ENST00000261367 ZNF608Q9ULD9 1512 aaPredicted RBP10.31□□□□□ -0.76
SNCAIP-201ENST00000261367 DHX8Q14562 1220 aaKnown RBP10.31□□□□□ -0.76
SNCAIP-201ENST00000261367 THOC2Q8NI27 1593 aaKnown RBP10.3□□□□□ -0.76
SNCAIP-201ENST00000261367 ACBD3Q9H3P7 528 aa10.3□□□□□ -0.76
SNCAIP-201ENST00000261367 MYBBP1AQ9BQG0 1328 aaKnown RBP10.3□□□□□ -0.76
SNCAIP-201ENST00000261367 PRKRIP1Q9H875 184 aaPredicted RBP10.3□□□□□ -0.76
SNCAIP-201ENST00000261367 TMF1P82094 1093 aa10.29□□□□□ -0.76
SNCAIP-201ENST00000261367 LETM1O95202 739 aaPredicted RBP10.29□□□□□ -0.76
SNCAIP-201ENST00000261367 GOLGA2Q08379 1002 aa10.29□□□□□ -0.76
SNCAIP-201ENST00000261367 SPRYD3Q8NCJ5 442 aa10.29□□□□□ -0.76
SNCAIP-201ENST00000261367 BACH2Q9BYV9 841 aa10.29□□□□□ -0.76
SNCAIP-201ENST00000261367 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.29□□□□□ -0.76
SNCAIP-201ENST00000261367 KDM6BO15054 1643 aa10.29□□□□□ -0.76
SNCAIP-201ENST00000261367 PAK3O75914 559 aaPredicted RBP10.29□□□□□ -0.76
SNCAIP-201ENST00000261367 UGGT2Q9NYU1 1516 aa10.28□□□□□ -0.76
SNCAIP-201ENST00000261367 FMN1Q68DA7 1419 aa10.28□□□□□ -0.76
SNCAIP-201ENST00000261367 MCM5P33992 734 aa10.28□□□□□ -0.76
SNCAIP-201ENST00000261367 KIAA1211Q6ZU35 1233 aa10.28□□□□□ -0.76
SNCAIP-201ENST00000261367 SMG6Q86US8 1419 aaKnown RBP10.28□□□□□ -0.76
SNCAIP-201ENST00000261367 TRAK2O60296 914 aa10.28□□□□□ -0.76
SNCAIP-201ENST00000261367 TSPY4P0CV99 314 aa10.28□□□□□ -0.76
SNCAIP-201ENST00000261367 TSPY10P0CW01 314 aa10.28□□□□□ -0.76
SNCAIP-201ENST00000261367 CLCN1P35523 988 aa10.28□□□□□ -0.76
SNCAIP-201ENST00000261367 USP8P40818 1118 aa10.28□□□□□ -0.76
SNCAIP-201ENST00000261367 ARID3CA6NKF2 412 aa10.27□□□□□ -0.76
SNCAIP-201ENST00000261367 ZSCAN30Q86W11 494 aa10.27□□□□□ -0.76
SNCAIP-201ENST00000261367 MRC2Q9UBG0 1479 aa10.27□□□□□ -0.77
SNCAIP-201ENST00000261367 MFAP1P55081 439 aaKnown RBP10.27□□□□□ -0.77
SNCAIP-201ENST00000261367 FBLN2P98095 1184 aa10.27□□□□□ -0.77
SNCAIP-201ENST00000261367 CIZ1Q9ULV3 898 aaPredicted RBP10.27□□□□□ -0.77
SNCAIP-201ENST00000261367 CALCOCO1Q9P1Z2 691 aa10.27□□□□□ -0.77
SNCAIP-201ENST00000261367 CHIC2Q9UKJ5 165 aa10.27□□□□□ -0.77
SNCAIP-201ENST00000261367 GRPEL1Q9HAV7 217 aa10.26□□□□□ -0.77
SNCAIP-201ENST00000261367 CNTLNQ9NXG0 1405 aa10.26□□□□□ -0.77
SNCAIP-201ENST00000261367 RNF20Q5VTR2 975 aa10.26□□□□□ -0.77
SNCAIP-201ENST00000261367 IQGAP2Q13576 1575 aa10.26□□□□□ -0.77
SNCAIP-201ENST00000261367 PTPN23Q9H3S7 1636 aa10.26□□□□□ -0.77
SNCAIP-201ENST00000261367 FGD6Q6ZV73 1430 aa10.26□□□□□ -0.77
SNCAIP-201ENST00000261367 EXOC6Q8TAG9 804 aa10.26□□□□□ -0.77
SNCAIP-201ENST00000261367 MBD3O95983 291 aa10.26□□□□□ -0.77
SNCAIP-201ENST00000261367 EIF4G3O43432 1585 aaKnown RBP10.26□□□□□ -0.77
SNCAIP-201ENST00000261367 DISP1Q96F81 1524 aa10.25□□□□□ -0.77
SNCAIP-201ENST00000261367 GTPBP4Q9BZE4 634 aaKnown RBP10.25□□□□□ -0.77
SNCAIP-201ENST00000261367 DYNC1I1O14576 645 aa10.25□□□□□ -0.77
SNCAIP-201ENST00000261367 CHMP4CQ96CF2 233 aa10.25□□□□□ -0.77
SNCAIP-201ENST00000261367 SUPT6HQ7KZ85 1726 aaKnown RBP10.24□□□□□ -0.77
SNCAIP-201ENST00000261367 UQCRHLA0A096LP55 91 aa10.24□□□□□ -0.77
SNCAIP-201ENST00000261367 UQCRHP07919 91 aa10.24□□□□□ -0.77
SNCAIP-201ENST00000261367 NINLQ9Y2I6 1382 aa10.24□□□□□ -0.77
SNCAIP-201ENST00000261367 NCOA2Q15596 1464 aa10.24□□□□□ -0.77
SNCAIP-201ENST00000261367 SASS6Q6UVJ0 657 aa10.24□□□□□ -0.77
SNCAIP-201ENST00000261367 RRP7BPQ9NSQ0 103 aa10.24□□□□□ -0.77
SNCAIP-201ENST00000261367 WASHC2AQ641Q2 1341 aa10.24□□□□□ -0.77
SNCAIP-201ENST00000261367 KDM2AQ9Y2K7 1162 aa10.24□□□□□ -0.77
SNCAIP-201ENST00000261367 ANKRD30AQ9BXX3 1397 aa10.24□□□□□ -0.77
SNCAIP-201ENST00000261367 TAF7LQ5H9L4 462 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms